RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	PRDX5	P30044	214 aa		10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	MAP3K10	Q02779	954 aa		10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	CCDC84	Q86UT8	332 aa	Predicted RBP	10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	TRMT44	Q8IYL2	757 aa	Known RBP	10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	IDI2	Q9BXS1	227 aa		10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	BICC1	Q9H694	974 aa	Known RBP	10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	COL2A1	P02458	1487 aa	Predicted RBP	10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.09	□□□□□ -0.79
PTK2-223	ENST00000520828	CD44	P16070	742 aa	Known RBP	10.09	□□□□□ -0.79
PTK2-223	ENST00000520828	FGFR2	P21802	821 aa		10.09	□□□□□ -0.79
PTK2-223	ENST00000520828	RABL6	Q3YEC7	729 aa	Predicted RBP	10.09	□□□□□ -0.79
PTK2-223	ENST00000520828	SH3BP5L	Q7L8J4	393 aa		10.09	□□□□□ -0.79
PTK2-223	ENST00000520828	SOCS4	Q8WXH5	440 aa		10.09	□□□□□ -0.79
PTK2-223	ENST00000520828	GNL3L	Q9NVN8	582 aa	Known RBP	10.09	□□□□□ -0.79
PTK2-223	ENST00000520828	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.09	□□□□□ -0.79
PTK2-223	ENST00000520828	LAMA2	P24043	3122 aa	Known RBP	10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	DOCK2	Q92608	1830 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	XRCC5	P13010	732 aa	Known RBP	10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	ZKSCAN1	P17029	563 aa	Predicted RBP	10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	COL9A1	P20849	921 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	HMGCS2	P54868	508 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	EXOSC9	Q06265	439 aa	Known RBP	10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	SPP2	Q13103	211 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	PDE3A	Q14432	1141 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	ANKRD44	Q8N8A2	993 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	ZNF280C	Q8ND82	737 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	KLHDC4	Q8TBB5	520 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	LPIN2	Q92539	896 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	NUDT12	Q9BQG2	462 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	TBC1D2	Q9BYX2	928 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	SEMA6B	Q9H3T3	888 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	MORF4L1	Q9UBU8	362 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	PRKAG2	Q9UGJ0	569 aa		10.08	□□□□□ -0.8
PTK2-223	ENST00000520828	UTY	O14607	1347 aa		10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	SALL1	Q9NSC2	1324 aa		10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	CACNA1F	O60840	1977 aa		10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	DOCK1	Q14185	1865 aa		10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	RFX7	Q2KHR2	1363 aa		10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	DDTL	A6NHG4	134 aa	Predicted RBP	10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	SLURP2	P0DP57	97 aa		10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	CACNB2	Q08289	660 aa	Predicted RBP	10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	PICALM	Q13492	652 aa		10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	LHX8	Q68G74	356 aa		10.07	□□□□□ -0.8
PTK2-223	ENST00000520828	PTPRF	P10586	1907 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	VCAN	P13611	3396 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	SEMA3E	O15041	775 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	TBC1D12	O60347	775 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	FOSL2	P15408	326 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	CCND3	P30281	292 aa	Predicted RBP	10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	MAPK4	P31152	587 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	RGS2	P41220	211 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	IRX3	P78415	501 aa	Predicted RBP	10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	DZIP1	Q86YF9	867 aa	Known RBP	10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	CCAR1	Q8IX12	1150 aa	Known RBP	10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	SLF2	Q8IX21	1173 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	ZGPAT	Q8N5A5	531 aa	Known RBP	10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	GPRC5A	Q8NFJ5	357 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	MYLIP	Q8WY64	445 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	AS3MT	Q9HBK9	375 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	DDX4	Q9NQI0	724 aa	Known RBP	10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	DENND2A	Q9ULE3	1009 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	GAK	O14976	1311 aa		10.06	□□□□□ -0.8
PTK2-223	ENST00000520828	PHIP	Q8WWQ0	1821 aa		10.05	□□□□□ -0.8
PTK2-223	ENST00000520828	EYS	Q5T1H1	3165 aa		10.05	□□□□□ -0.8
PTK2-223	ENST00000520828	FAM196B	A6NMK8	535 aa		10.05	□□□□□ -0.8
PTK2-223	ENST00000520828	USP17L5	A8MUK1	530 aa		10.05	□□□□□ -0.8
PTK2-223	ENST00000520828	EYA2	O00167	538 aa		10.05	□□□□□ -0.8
PTK2-223	ENST00000520828	BTD	P43251	543 aa		10.05	□□□□□ -0.8
PTK2-223	ENST00000520828	ATP2B3	Q16720	1220 aa		10.05	□□□□□ -0.8
PTK2-223	ENST00000520828	DOCK3	Q8IZD9	2030 aa		10.05	□□□□□ -0.8
PTK2-223	ENST00000520828	LOC285556	D6RIA3	1793 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	MYH13	Q9UKX3	1938 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	TNFRSF10A	O00220	468 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	ATN1	P54259	1190 aa	Predicted RBP	10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	HERVK_113	P62684	666 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	SMAD3	P84022	425 aa	Known RBP	10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	SHH	Q15465	462 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	SH3D19	Q5HYK7	790 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	TJAP1	Q5JTD0	557 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	WDR63	Q8IWG1	891 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	FAM163A	Q96GL9	167 aa	Predicted RBP	10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	P2RX7	Q99572	595 aa	Known RBP	10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	APBA2	Q99767	749 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	CWC22	Q9HCG8	908 aa	Known RBP	10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	TMOD4	Q9NZQ9	345 aa		10.04	□□□□□ -0.8
PTK2-223	ENST00000520828	PLXNB2	O15031	1838 aa		10.03	□□□□□ -0.8
PTK2-223	ENST00000520828	HOXA7	P31268	230 aa	Predicted RBP	10.03	□□□□□ -0.8
PTK2-223	ENST00000520828	CAP2	P40123	477 aa		10.03	□□□□□ -0.8
PTK2-223	ENST00000520828	PHKA1	P46020	1223 aa		10.03	□□□□□ -0.8
PTK2-223	ENST00000520828	RTP1	P59025	263 aa		10.03	□□□□□ -0.8
PTK2-223	ENST00000520828	MTMR2	Q13614	643 aa		10.03	□□□□□ -0.8
PTK2-223	ENST00000520828	CCL14	Q16627	93 aa		10.03	□□□□□ -0.8
PTK2-223	ENST00000520828	MORN1	Q5T089	497 aa		10.03	□□□□□ -0.8

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