RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 CD96P40200 585 aa8.51□□□□□ -1.05
LINC00535-204ENST00000520513 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC00535-204ENST00000520513 TOP6BLQ8N6T0 577 aa8.51□□□□□ -1.05
LINC00535-204ENST00000520513 FLCNQ8NFG4 579 aa8.51□□□□□ -1.05
LINC00535-204ENST00000520513 GAL3ST3Q96A11 431 aa8.51□□□□□ -1.05
LINC00535-204ENST00000520513 HEXIM2Q96MH2 286 aaKnown RBP8.51□□□□□ -1.05
LINC00535-204ENST00000520513 PLAGL2Q9UPG8 496 aa8.51□□□□□ -1.05
LINC00535-204ENST00000520513 RNF114Q9Y508 228 aa8.51□□□□□ -1.05
LINC00535-204ENST00000520513 GNA15P30679 374 aa8.5□□□□□ -1.05
LINC00535-204ENST00000520513 ZBTB37Q5TC79 503 aa8.5□□□□□ -1.05
LINC00535-204ENST00000520513 PCDHA4Q9UN74 947 aa8.5□□□□□ -1.05
LINC00535-204ENST00000520513 UNCXA6NJT0 531 aa8.49□□□□□ -1.05
LINC00535-204ENST00000520513 PRPF40AO75400 957 aaKnown RBP8.49□□□□□ -1.05
LINC00535-204ENST00000520513 OXCT1P55809 520 aa8.49□□□□□ -1.05
LINC00535-204ENST00000520513 LRFN4Q6PJG9 635 aa8.49□□□□□ -1.05
LINC00535-204ENST00000520513 STK11IPQ8N1F8 1099 aa8.49□□□□□ -1.05
LINC00535-204ENST00000520513 MRRFQ96E11 262 aaKnown RBP8.49□□□□□ -1.05
LINC00535-204ENST00000520513 DUSP9Q99956 384 aaKnown RBP8.49□□□□□ -1.05
LINC00535-204ENST00000520513 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
LINC00535-204ENST00000520513 SSU72Q9NP77 194 aaKnown RBP8.48□□□□□ -1.05
LINC00535-204ENST00000520513 TTF2Q9UNY4 1162 aaKnown RBP8.48□□□□□ -1.05
LINC00535-204ENST00000520513 SV2BQ7L1I2 683 aa8.47□□□□□ -1.05
LINC00535-204ENST00000520513 NETO1Q8TDF5 533 aa8.47□□□□□ -1.05
LINC00535-204ENST00000520513 FBRSQ9HAH7 460 aa8.47□□□□□ -1.05
LINC00535-204ENST00000520513 CYP8B1Q9UNU6 501 aa8.47□□□□□ -1.05
LINC00535-204ENST00000520513 SLC5A6Q9Y289 635 aa8.47□□□□□ -1.05
LINC00535-204ENST00000520513 CNTNAP4Q9C0A0 1308 aa8.47□□□□□ -1.05
LINC00535-204ENST00000520513 CD8BP10966 210 aa8.46□□□□□ -1.06
LINC00535-204ENST00000520513 LRRC14Q15048 493 aa8.46□□□□□ -1.06
LINC00535-204ENST00000520513 MEI1Q5TIA1 1274 aa8.46□□□□□ -1.06
LINC00535-204ENST00000520513 CYFIP1Q7L576 1253 aa8.46□□□□□ -1.06
LINC00535-204ENST00000520513 PLPPR2Q96GM1 343 aa8.46□□□□□ -1.06
LINC00535-204ENST00000520513 MKNK2Q9HBH9 465 aa8.46□□□□□ -1.06
LINC00535-204ENST00000520513 KIAA1522Q9P206 1035 aaPredicted RBP8.46□□□□□ -1.06
LINC00535-204ENST00000520513 SAMM50Q9Y512 469 aa8.46□□□□□ -1.06
LINC00535-204ENST00000520513 PCDHB5Q9Y5E4 795 aa8.46□□□□□ -1.06
LINC00535-204ENST00000520513 AK5Q9Y6K8 562 aa8.46□□□□□ -1.06
LINC00535-204ENST00000520513 FANCGO15287 622 aa8.45□□□□□ -1.06
LINC00535-204ENST00000520513 EIF4BP23588 611 aaKnown RBP8.45□□□□□ -1.06
LINC00535-204ENST00000520513 TTBK2Q6IQ55 1244 aa8.45□□□□□ -1.06
LINC00535-204ENST00000520513 FRMD6Q96NE9 622 aa8.45□□□□□ -1.06
LINC00535-204ENST00000520513 PRDM10Q9NQV6 1147 aa8.45□□□□□ -1.06
LINC00535-204ENST00000520513 ADAMTS6Q9UKP5 1117 aa8.45□□□□□ -1.06
LINC00535-204ENST00000520513 EOMESO95936 686 aa8.44□□□□□ -1.06
LINC00535-204ENST00000520513 CEACAM5P06731 702 aa8.44□□□□□ -1.06
LINC00535-204ENST00000520513 ITGB5P18084 799 aa8.44□□□□□ -1.06
LINC00535-204ENST00000520513 TAGLNQ01995 201 aaKnown RBP8.44□□□□□ -1.06
LINC00535-204ENST00000520513 NKG7Q16617 165 aa8.44□□□□□ -1.06
LINC00535-204ENST00000520513 SCARA3Q6AZY7 606 aa8.44□□□□□ -1.06
LINC00535-204ENST00000520513 CTSHP09668 335 aa8.43□□□□□ -1.06
LINC00535-204ENST00000520513 JUNBP17275 347 aaPredicted RBP8.43□□□□□ -1.06
LINC00535-204ENST00000520513 ITIH2P19823 946 aa8.43□□□□□ -1.06
LINC00535-204ENST00000520513 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
LINC00535-204ENST00000520513 SEPT6Q14141 434 aa8.43□□□□□ -1.06
LINC00535-204ENST00000520513 SLBPQ14493 270 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC00535-204ENST00000520513 ARMCX6Q7L4S7 300 aa8.43□□□□□ -1.06
LINC00535-204ENST00000520513 FAM161BQ96MY7 647 aa8.43□□□□□ -1.06
LINC00535-204ENST00000520513 TNKS2Q9H2K2 1166 aa8.43□□□□□ -1.06
LINC00535-204ENST00000520513 PRAMEF27A3QJZ7 478 aa8.42□□□□□ -1.06
LINC00535-204ENST00000520513 CCDC85BQ15834 202 aaPredicted RBP8.42□□□□□ -1.06
LINC00535-204ENST00000520513 MAP3K11Q16584 847 aa8.42□□□□□ -1.06
LINC00535-204ENST00000520513 ZNF792Q3KQV3 632 aa8.42□□□□□ -1.06
LINC00535-204ENST00000520513 WIPI1Q5MNZ9 446 aaPredicted RBP8.42□□□□□ -1.06
LINC00535-204ENST00000520513 TMC4Q7Z404 712 aa8.42□□□□□ -1.06
LINC00535-204ENST00000520513 ELMO3Q96BJ8 720 aa8.42□□□□□ -1.06
LINC00535-204ENST00000520513 ASIC4Q96FT7 647 aa8.42□□□□□ -1.06
LINC00535-204ENST00000520513 PARP2Q9UGN5 583 aa8.42□□□□□ -1.06
LINC00535-204ENST00000520513 SLITRK5O94991 958 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 PAPLNO95428 1278 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 FUT4P22083 530 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 DAB2P98082 770 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 PRKCQQ04759 706 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 MRPL58Q14197 206 aaKnown RBP8.41□□□□□ -1.06
LINC00535-204ENST00000520513 PLCL1Q15111 1095 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 IFI16Q16666 785 aaKnown RBP8.41□□□□□ -1.06
LINC00535-204ENST00000520513 NKPD1Q17RQ9 610 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 SPACA3Q8IXA5 215 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 PICK1Q9NRD5 415 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 IGSF5Q9NSI5 407 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 MBNL3Q9NUK0 354 aaKnown RBP8.41□□□□□ -1.06
LINC00535-204ENST00000520513 VAV3Q9UKW4 847 aa8.41□□□□□ -1.06
LINC00535-204ENST00000520513 GFRA2O00451 464 aa8.4□□□□□ -1.06
LINC00535-204ENST00000520513 YBX3P16989 372 aaKnown RBP eCLIP8.4□□□□□ -1.06
LINC00535-204ENST00000520513 AOC3Q16853 763 aa8.4□□□□□ -1.06
LINC00535-204ENST00000520513 RIN3Q8TB24 985 aa8.4□□□□□ -1.06
LINC00535-204ENST00000520513 WNT10AQ9GZT5 417 aa8.4□□□□□ -1.06
LINC00535-204ENST00000520513 MRS2Q9HD23 443 aa8.4□□□□□ -1.06
LINC00535-204ENST00000520513 PRR33A8MZF0 331 aa8.39□□□□□ -1.07
LINC00535-204ENST00000520513 RNASE1P07998 156 aaKnown RBP8.39□□□□□ -1.07
LINC00535-204ENST00000520513 TFE3P19532 575 aaPredicted RBP8.39□□□□□ -1.07
LINC00535-204ENST00000520513 LIG3P49916 1009 aa8.39□□□□□ -1.07
LINC00535-204ENST00000520513 AGMOQ6ZNB7 445 aa8.39□□□□□ -1.07
LINC00535-204ENST00000520513 ARHGAP27Q6ZUM4 889 aa8.39□□□□□ -1.07
LINC00535-204ENST00000520513 IGF2BP3O00425 579 aaKnown RBP eCLIP8.38□□□□□ -1.07
LINC00535-204ENST00000520513 SORBS3O60504 671 aa8.38□□□□□ -1.07
LINC00535-204ENST00000520513 RPS26P62854 115 aaKnown RBP8.38□□□□□ -1.07
LINC00535-204ENST00000520513 PSMD2Q13200 908 aa8.38□□□□□ -1.07
LINC00535-204ENST00000520513 CDC37L1Q7L3B6 337 aa8.38□□□□□ -1.07
LINC00535-204ENST00000520513 HDXQ7Z353 690 aa8.38□□□□□ -1.07
LINC00535-204ENST00000520513 ZNF507Q8TCN5 953 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms