RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 GRK4P32298 578 aa18.6■□□□□ 0.57
CSMD1-207ENST00000520451 PRKCZQ05513 592 aa18.6■□□□□ 0.57
CSMD1-207ENST00000520451 DIEXFQ68CQ4 756 aaKnown RBP18.6■□□□□ 0.57
CSMD1-207ENST00000520451 SMCR8Q8TEV9 937 aaPredicted RBP18.6■□□□□ 0.57
CSMD1-207ENST00000520451 AGTPBP1Q9UPW5 1226 aa18.6■□□□□ 0.57
CSMD1-207ENST00000520451 NOP58Q9Y2X3 529 aaKnown RBP18.6■□□□□ 0.57
CSMD1-207ENST00000520451 PHIPQ8WWQ0 1821 aa18.59■□□□□ 0.57
CSMD1-207ENST00000520451 CYP2E1P05181 493 aaPredicted RBP18.59■□□□□ 0.57
CSMD1-207ENST00000520451 PLCG2P16885 1265 aa18.59■□□□□ 0.57
CSMD1-207ENST00000520451 MTFR1Q15390 333 aa18.59■□□□□ 0.57
CSMD1-207ENST00000520451 GCC1Q96CN9 775 aa18.59■□□□□ 0.57
CSMD1-207ENST00000520451 MAST2Q6P0Q8 1798 aa18.59■□□□□ 0.57
CSMD1-207ENST00000520451 PTPRFP10586 1907 aa18.59■□□□□ 0.57
CSMD1-207ENST00000520451 CAP2P40123 477 aa18.58■□□□□ 0.56
CSMD1-207ENST00000520451 ZAP70P43403 619 aa18.58■□□□□ 0.56
CSMD1-207ENST00000520451 SPP2Q13103 211 aa18.58■□□□□ 0.56
CSMD1-207ENST00000520451 TREML2Q5T2D2 321 aa18.58■□□□□ 0.56
CSMD1-207ENST00000520451 ADGRA1Q86SQ6 560 aa18.58■□□□□ 0.56
CSMD1-207ENST00000520451 ZNF512BQ96KM6 892 aaPredicted RBP18.58■□□□□ 0.56
CSMD1-207ENST00000520451 CCDC8Q9H0W5 538 aaPredicted RBP18.58■□□□□ 0.56
CSMD1-207ENST00000520451 TLR7Q9NYK1 1049 aaKnown RBP18.58■□□□□ 0.56
CSMD1-207ENST00000520451 BIN2Q9UBW5 565 aaPredicted RBP18.58■□□□□ 0.56
CSMD1-207ENST00000520451 HERC5Q9UII4 1024 aaKnown RBP18.58■□□□□ 0.56
CSMD1-207ENST00000520451 DBNLQ9UJU6 430 aaKnown RBP18.58■□□□□ 0.56
CSMD1-207ENST00000520451 RRP1BQ14684 758 aaKnown RBP18.57■□□□□ 0.56
CSMD1-207ENST00000520451 MAPKAPK5Q8IW41 473 aa18.57■□□□□ 0.56
CSMD1-207ENST00000520451 ZNF280CQ8ND82 737 aa18.57■□□□□ 0.56
CSMD1-207ENST00000520451 TGFBRAP1Q8WUH2 860 aa18.57■□□□□ 0.56
CSMD1-207ENST00000520451 DHX36Q9H2U1 1008 aaKnown RBP18.57■□□□□ 0.56
CSMD1-207ENST00000520451 PIH1D3Q9NQM4 214 aaKnown RBP18.57■□□□□ 0.56
CSMD1-207ENST00000520451 PI4KBQ9UBF8 816 aa18.57■□□□□ 0.56
CSMD1-207ENST00000520451 PNMA3Q9UL41 463 aa18.57■□□□□ 0.56
CSMD1-207ENST00000520451 GABRQQ9UN88 632 aa18.57■□□□□ 0.56
CSMD1-207ENST00000520451 FLT1P17948 1338 aa18.56■□□□□ 0.56
CSMD1-207ENST00000520451 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
CSMD1-207ENST00000520451 PPP4CP60510 307 aa18.56■□□□□ 0.56
CSMD1-207ENST00000520451 CEP85Q6P2H3 762 aa18.56■□□□□ 0.56
CSMD1-207ENST00000520451 PROCA1Q8NCQ7 364 aaPredicted RBP18.56■□□□□ 0.56
CSMD1-207ENST00000520451 EAF2Q96CJ1 260 aaPredicted RBP18.56■□□□□ 0.56
CSMD1-207ENST00000520451 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
CSMD1-207ENST00000520451 USP17L5A8MUK1 530 aa18.55■□□□□ 0.56
CSMD1-207ENST00000520451 TNPO2O14787 897 aaKnown RBP18.55■□□□□ 0.56
CSMD1-207ENST00000520451 CCL5P13501 91 aa18.55■□□□□ 0.56
CSMD1-207ENST00000520451 HMGCS2P54868 508 aa18.55■□□□□ 0.56
CSMD1-207ENST00000520451 UBXN2AP68543 259 aa18.55■□□□□ 0.56
CSMD1-207ENST00000520451 ANKRD13CQ8N6S4 541 aa18.55■□□□□ 0.56
CSMD1-207ENST00000520451 SLAIN1Q8ND83 568 aa18.55■□□□□ 0.56
CSMD1-207ENST00000520451 SHISA4Q96DD7 197 aa18.55■□□□□ 0.56
CSMD1-207ENST00000520451 IGSF3O75054 1194 aa18.54■□□□□ 0.56
CSMD1-207ENST00000520451 FLT3LGP49771 235 aa18.54■□□□□ 0.56
CSMD1-207ENST00000520451 CRACR2BQ8N4Y2 399 aaPredicted RBP18.54■□□□□ 0.56
CSMD1-207ENST00000520451 NKX2-3Q8TAU0 364 aa18.54■□□□□ 0.56
CSMD1-207ENST00000520451 PANK1Q8TE04 598 aa18.54■□□□□ 0.56
CSMD1-207ENST00000520451 TRIM34Q9BYJ4 488 aa18.54■□□□□ 0.56
CSMD1-207ENST00000520451 RNF208Q9H0X6 261 aa18.54■□□□□ 0.56
CSMD1-207ENST00000520451 AS3MTQ9HBK9 375 aa18.54■□□□□ 0.56
CSMD1-207ENST00000520451 EXOC6BQ9Y2D4 811 aa18.54■□□□□ 0.56
CSMD1-207ENST00000520451 MGAMO43451 1857 aa18.54■□□□□ 0.56
CSMD1-207ENST00000520451 ATAD5Q96QE3 1844 aa18.53■□□□□ 0.56
CSMD1-207ENST00000520451 ADCY3O60266 1144 aa18.53■□□□□ 0.56
CSMD1-207ENST00000520451 IDH1O75874 414 aaKnown RBP18.53■□□□□ 0.56
CSMD1-207ENST00000520451 CYP7A1P22680 504 aa18.53■□□□□ 0.56
CSMD1-207ENST00000520451 DYNLL1P63167 89 aaKnown RBP18.53■□□□□ 0.56
CSMD1-207ENST00000520451 PABPC4Q13310 644 aaKnown RBP eCLIP18.53■□□□□ 0.56
CSMD1-207ENST00000520451 DNAJC18Q9H819 358 aa18.53■□□□□ 0.56
CSMD1-207ENST00000520451 SAP30BPQ9UHR5 308 aaKnown RBP18.53■□□□□ 0.56
CSMD1-207ENST00000520451 PALD1Q9ULE6 856 aa18.53■□□□□ 0.56
CSMD1-207ENST00000520451 LOC285556D6RIA3 1793 aa18.53■□□□□ 0.56
CSMD1-207ENST00000520451 SIPA1L1O43166 1804 aa18.52■□□□□ 0.56
CSMD1-207ENST00000520451 GJB1P08034 283 aa18.52■□□□□ 0.56
CSMD1-207ENST00000520451 GJA8P48165 433 aa18.52■□□□□ 0.56
CSMD1-207ENST00000520451 FAM110CQ1W6H9 321 aa18.52■□□□□ 0.56
CSMD1-207ENST00000520451 HABP4Q5JVS0 413 aaKnown RBP18.52■□□□□ 0.56
CSMD1-207ENST00000520451 AACSQ86V21 672 aa18.52■□□□□ 0.56
CSMD1-207ENST00000520451 ERC1Q8IUD2 1116 aa18.52■□□□□ 0.56
CSMD1-207ENST00000520451 FOXP4Q8IVH2 680 aaPredicted RBP18.52■□□□□ 0.56
CSMD1-207ENST00000520451 COA7Q96BR5 231 aa18.52■□□□□ 0.56
CSMD1-207ENST00000520451 NDUFB9Q9Y6M9 179 aa18.52■□□□□ 0.56
CSMD1-207ENST00000520451 HLA-DOAP06340 250 aa18.51■□□□□ 0.55
CSMD1-207ENST00000520451 ASNSP08243 561 aa18.51■□□□□ 0.55
CSMD1-207ENST00000520451 ELNP15502 786 aa18.51■□□□□ 0.55
CSMD1-207ENST00000520451 GCLCP48506 637 aaPredicted RBP18.51■□□□□ 0.55
CSMD1-207ENST00000520451 MTMR2Q13614 643 aa18.51■□□□□ 0.55
CSMD1-207ENST00000520451 SH3D19Q5HYK7 790 aa18.51■□□□□ 0.55
CSMD1-207ENST00000520451 METTL16Q86W50 562 aaKnown RBP18.51■□□□□ 0.55
CSMD1-207ENST00000520451 MIGA1Q8NAN2 632 aa18.51■□□□□ 0.55
CSMD1-207ENST00000520451 WDR18Q9BV38 432 aa18.51■□□□□ 0.55
CSMD1-207ENST00000520451 UNC93B1Q9H1C4 597 aa18.51■□□□□ 0.55
CSMD1-207ENST00000520451 ASCC2Q9H1I8 757 aaPredicted RBP18.51■□□□□ 0.55
CSMD1-207ENST00000520451 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
CSMD1-207ENST00000520451 MYO5AQ9Y4I1 1855 aaKnown RBP18.51■□□□□ 0.55
CSMD1-207ENST00000520451 GDF11O95390 407 aa18.5■□□□□ 0.55
CSMD1-207ENST00000520451 INHAP05111 366 aa18.5■□□□□ 0.55
CSMD1-207ENST00000520451 BACE1P56817 501 aa18.5■□□□□ 0.55
CSMD1-207ENST00000520451 JAG1P78504 1218 aa18.5■□□□□ 0.55
CSMD1-207ENST00000520451 IRF5Q13568 498 aa18.5■□□□□ 0.55
CSMD1-207ENST00000520451 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
CSMD1-207ENST00000520451 MAGEB6Q8N7X4 407 aa18.5■□□□□ 0.55
CSMD1-207ENST00000520451 PXYLP1Q8TE99 480 aa18.5■□□□□ 0.55
CSMD1-207ENST00000520451 TMOD4Q9NZQ9 345 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms