RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 FGRP09769 529 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 PCP11498 1178 aaKnown RBP13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 TDO2P48775 406 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 TNNI2P48788 182 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 RBM25P49756 843 aaKnown RBP13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 ANAPC15P60006 121 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 C12orf60Q5U649 245 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 METTL16Q86W50 562 aaKnown RBP13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 MAPKAPK5Q8IW41 473 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 ROBO3Q96MS0 1386 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 CLRN2A0PK11 232 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 USP17L12C9JPN9 530 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 USP17L21D6R901 530 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 MCCP23508 829 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 MAP3K10Q02779 954 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 CREB3L3Q68CJ9 461 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 LHX8Q68G74 356 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 TTC6Q86TZ1 520 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 AMOTL1Q8IY63 956 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 SLC39A7Q92504 469 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 EHD4Q9H223 541 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 MCM9Q9NXL9 1143 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 PCDHB8Q9UN66 801 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 LAMA4Q16363 1823 aa13.61□□□□□ -0.23
ARFGEF1-202ENST00000517955 POLR2AP24928 1970 aaKnown RBP13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 ZNF213O14771 459 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 SLC27A2O14975 620 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 CYP21A2P08686 494 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 C7P10643 843 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 CACNB3P54284 484 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 GABPAQ06546 454 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 PPARAQ07869 468 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 ANGEL2Q5VTE6 544 aaKnown RBP13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 SH3BP5LQ7L8J4 393 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 FOXP4Q8IVH2 680 aaPredicted RBP13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 ZFPM1Q8IX07 1006 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 IL27Q8NEV9 243 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 TBC1D32Q96NH3 1257 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 C22orf23Q9BZE7 217 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 RRAGCQ9HB90 399 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 ASTN2O75129 1339 aaPredicted RBP13.6□□□□□ -0.23
ARFGEF1-202ENST00000517955 LAMB1P07942 1786 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 TCP10L2B9ZVM9 353 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 TBC1D12O60347 775 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 ZKSCAN1P17029 563 aaPredicted RBP13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 PICALMQ13492 652 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 RASA3Q14644 834 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 TEPSINQ96N21 525 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 DEFB129Q9H1M3 183 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 VEZTQ9HBM0 779 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 GGA3Q9NZ52 723 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 PALD1Q9ULE6 856 aa13.59□□□□□ -0.23
ARFGEF1-202ENST00000517955 DDTLA6NHG4 134 aaPredicted RBP13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 HLA-DOAP06340 250 aa13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 SLC3A2P08195 630 aaKnown RBP13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 PLCD1P51178 756 aa13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 TCP10Q12799 353 aa13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 KRT32Q14532 448 aa13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 LDHDQ86WU2 507 aa13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 STAG1Q8WVM7 1258 aa13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 DCPSQ96C86 337 aaKnown RBP13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 HOOK2Q96ED9 719 aa13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 TM6SF1Q9BZW5 370 aa13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 RNF41Q9H4P4 317 aaPredicted RBP13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 HERC5Q9UII4 1024 aaKnown RBP13.58□□□□□ -0.24
ARFGEF1-202ENST00000517955 MINDY4BA8MYZ0 360 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 ORC4O43929 436 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 AKNAD1Q5T1N1 836 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 C16orf86Q6ZW13 317 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 TMEM39BQ9GZU3 492 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 ZNF287Q9HBT7 754 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 NMRK2Q9NPI5 230 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 SWAP70Q9UH65 585 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 SERPINB13Q9UIV8 391 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 SNX14Q9Y5W7 946 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 SIPA1L1O43166 1804 aa13.57□□□□□ -0.24
ARFGEF1-202ENST00000517955 CYP2D6P10635 497 aa13.56□□□□□ -0.24
ARFGEF1-202ENST00000517955 PDE4BQ07343 736 aa13.56□□□□□ -0.24
ARFGEF1-202ENST00000517955 CDC37L1Q7L3B6 337 aa13.56□□□□□ -0.24
ARFGEF1-202ENST00000517955 CSRNP1Q96S65 589 aa13.56□□□□□ -0.24
ARFGEF1-202ENST00000517955 TMEM106CQ9BVX2 250 aa13.56□□□□□ -0.24
ARFGEF1-202ENST00000517955 CNNM2Q9H8M5 875 aa13.56□□□□□ -0.24
ARFGEF1-202ENST00000517955 SAP30BPQ9UHR5 308 aaKnown RBP13.56□□□□□ -0.24
ARFGEF1-202ENST00000517955 CYP2D7A0A087X1C5 515 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 E7EWF7 191 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 HMGB1P09429 215 aaKnown RBP13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 PSMA5P28066 241 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 HAND2P61296 217 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 SUPT20HL1Q3ZLR7 823 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 EAPPQ56P03 285 aaPredicted RBP13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 TATDN1Q6P1N9 297 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 MFSD6Q6ZSS7 791 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms