RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 ROBO2Q9HCK4 1378 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 UBR1Q8IWV7 1749 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 OVOS2A0A0J9YW53 1432 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 OVOS2Q6IE36 1432 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 CPS1P31327 1500 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 DIP2AQ14689 1571 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CHD4Q14839 1912 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 MYH10P35580 1976 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 A0A0D9SFI3 127 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ATP5J2-PTCD1G3V325 749 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 EXOC5O00471 708 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 LAD1O00515 517 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 EBAG9O00559 213 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PSMA7O14818 248 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 POLR2DO15514 142 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 JAK2O60674 1132 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 HSF2BPO75031 334 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PTCD1O75127 700 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TACC1O75410 805 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 IDH1O75874 414 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 KIAA0754O94854 1291 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PDE8BO95263 885 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 FMNL1O95466 1100 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 BAG3O95817 575 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ANXA1P04083 346 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PCCAP05165 728 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC172P0C7W6 258 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRKAR2AP13861 404 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PHKG2P15735 406 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PFKFB1P16118 471 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZSCAN20P17040 1043 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 IFNAR1P17181 557 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ATP2B1P20020 1258 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 MARCKSP29966 332 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 GNA11P29992 359 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TIE1P35590 1138 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 KRT2P35908 639 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 LONP1P36776 959 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 UBA7P41226 1012 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 EPS15P42566 896 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRAPPC10P48553 1259 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CEBPAP49715 358 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 DNM2P50570 870 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NDUFA8P51970 172 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 FOSBP53539 338 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NAP1L1P55209 391 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NLRP5P59047 1200 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CHMP4BP1P59074 171 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZC3H6P61129 1189 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 MAP3K9P80192 1104 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PPP2R3AQ06190 1150 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NCBP1Q09161 790 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRAF1Q13077 416 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PPFIA1Q13136 1202 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 HIC1Q14526 733 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SMC1AQ14683 1233 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NR1I3Q14994 352 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 POSTNQ15063 836 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 RTN1Q16799 776 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 WHAMMP3Q1A5X7 153 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TMEM266Q2M3C6 531 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 GLE1Q53GS7 698 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 DNAJC21Q5F1R6 531 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 RRP12Q5JTH9 1297 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF569Q5MCW4 686 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 AXDND1Q5T1B0 1012 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 AKNAD1Q5T1N1 836 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SOGA3Q5TF21 947 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NBPF14Q5TI25 921 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 RRAGBQ5VZM2 374 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 RESP18Q5W5W9 173 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 KRT40Q6A162 431 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 WWC2Q6AWC2 1192 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ISM2Q6H9L7 571 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 FAM173BQ6P4H8 233 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 DTHD1Q6ZMT9 781 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 GBP6Q6ZN66 633 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NYAP1Q6ZVC0 841 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CHST3Q7LGC8 479 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SRGAP1Q7Z6B7 1085 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CROCCP2Q86T23 111 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 RPAINQ86UA6 219 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 VPS36Q86VN1 386 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NOSTRINQ8IVI9 506 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 DHX40Q8IX18 779 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SLF2Q8IX21 1173 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC170Q8IYT3 715 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 IFNL3Q8IZI9 196 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF444Q8N0Y2 327 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ARFGAP2Q8N6H7 521 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 IGSF22Q8N9C0 903 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZBTB38Q8NAP3 1195 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 FANCBQ8NB91 859 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 OR8K1Q8NGG5 319 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 FAM71BQ8TC56 605 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NUP133Q8WUM0 1156 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CPLX3Q8WVH0 158 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PPM1EQ8WY54 764 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 LPIN2Q92539 896 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC102AQ96A19 550 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms