RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 TACC3Q9Y6A5 838 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 BAZ1AQ9NRL2 1556 aaPredicted RBP5.9□□□□□ -1.46
CAST-242ENST00000515063 PRAMEF27A3QJZ7 478 aa5.9□□□□□ -1.46
CAST-242ENST00000515063 RING1Q06587 406 aa5.9□□□□□ -1.46
CAST-242ENST00000515063 RASIP1Q5U651 963 aa5.9□□□□□ -1.46
CAST-242ENST00000515063 TOP6BLQ8N6T0 577 aa5.9□□□□□ -1.46
CAST-242ENST00000515063 NETO1Q8TDF5 533 aa5.9□□□□□ -1.46
CAST-242ENST00000515063 DUSP23Q9BVJ7 150 aa5.9□□□□□ -1.46
CAST-242ENST00000515063 ZC3H7BQ9UGR2 993 aaKnown RBP5.9□□□□□ -1.46
CAST-242ENST00000515063 LRIG2O94898 1065 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 ETF1P62495 437 aaKnown RBP5.89□□□□□ -1.47
CAST-242ENST00000515063 PWP1Q13610 501 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 WIPI1Q5MNZ9 446 aaPredicted RBP5.89□□□□□ -1.47
CAST-242ENST00000515063 MEI1Q5TIA1 1274 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 LRFN4Q6PJG9 635 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 CYFIP1Q7L576 1253 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 TP53INP2Q8IXH6 220 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 FLCNQ8NFG4 579 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 PLPPR2Q96GM1 343 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 PSMG3-AS1Q96PY0 264 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 PRDM10Q9NQV6 1147 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 SLC5A6Q9Y289 635 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 OAS3Q9Y6K5 1087 aaKnown RBP5.89□□□□□ -1.47
CAST-242ENST00000515063 USP31Q70CQ4 1352 aa5.89□□□□□ -1.47
CAST-242ENST00000515063 NTF4P34130 210 aa5.88□□□□□ -1.47
CAST-242ENST00000515063 MAP3K11Q16584 847 aa5.88□□□□□ -1.47
CAST-242ENST00000515063 IFI16Q16666 785 aaKnown RBP5.88□□□□□ -1.47
CAST-242ENST00000515063 TSNAXIP1Q2TAA8 658 aa5.88□□□□□ -1.47
CAST-242ENST00000515063 ZNF746Q6NUN9 644 aaPredicted RBP5.88□□□□□ -1.47
CAST-242ENST00000515063 ARMCX6Q7L4S7 300 aa5.88□□□□□ -1.47
CAST-242ENST00000515063 CCDC84Q86UT8 332 aaPredicted RBP5.88□□□□□ -1.47
CAST-242ENST00000515063 FAM161BQ96MY7 647 aa5.88□□□□□ -1.47
CAST-242ENST00000515063 BCL2L13Q9BXK5 485 aa5.88□□□□□ -1.47
CAST-242ENST00000515063 WNT10AQ9GZT5 417 aa5.88□□□□□ -1.47
CAST-242ENST00000515063 RNF19AQ9NV58 838 aa5.88□□□□□ -1.47
CAST-242ENST00000515063 MROH2BQ7Z745 1585 aa5.88□□□□□ -1.47
CAST-242ENST00000515063 TMEM265A0A087WTH1 108 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 GNAT3A8MTJ3 354 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
CAST-242ENST00000515063 LEFTY1O75610 366 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 BPNT1O95861 308 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 CEACAM5P06731 702 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 CAP2P40123 477 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 PDE4BQ07343 736 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 SEPT6Q14141 434 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 INPP5AQ14642 412 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 TMCO4Q5TGY1 634 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 MCTP1Q6DN14 999 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 HID1Q8IV36 788 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 MFSD2AQ8NA29 543 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 FOXQ1Q9C009 403 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 CECR2Q9BXF3 1484 aa5.87□□□□□ -1.47
CAST-242ENST00000515063 UNC13AQ9UPW8 1703 aa5.86□□□□□ -1.47
CAST-242ENST00000515063 COL17A1Q9UMD9 1497 aaPredicted RBP5.86□□□□□ -1.47
CAST-242ENST00000515063 ADAMTS4O75173 837 aa5.86□□□□□ -1.47
CAST-242ENST00000515063 RPL6Q02878 288 aaKnown RBP5.86□□□□□ -1.47
CAST-242ENST00000515063 PTPN11Q06124 597 aaPredicted RBP5.86□□□□□ -1.47
CAST-242ENST00000515063 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.86□□□□□ -1.47
CAST-242ENST00000515063 RELL1Q8IUW5 271 aa5.86□□□□□ -1.47
CAST-242ENST00000515063 FAM181AQ8N9Y4 354 aa5.86□□□□□ -1.47
CAST-242ENST00000515063 HRASLS5Q96KN8 279 aa5.86□□□□□ -1.47
CAST-242ENST00000515063 PRDM5Q9NQX1 630 aaPredicted RBP5.86□□□□□ -1.47
CAST-242ENST00000515063 VAV3Q9UKW4 847 aa5.86□□□□□ -1.47
CAST-242ENST00000515063 MAPK8IP1Q9UQF2 711 aa5.86□□□□□ -1.47
CAST-242ENST00000515063 PCDHB5Q9Y5E4 795 aa5.86□□□□□ -1.47
CAST-242ENST00000515063 PAX4O43316 350 aa5.85□□□□□ -1.47
CAST-242ENST00000515063 CTSHP09668 335 aa5.85□□□□□ -1.47
CAST-242ENST00000515063 TFE3P19532 575 aaPredicted RBP5.85□□□□□ -1.47
CAST-242ENST00000515063 PRKCQQ04759 706 aa5.85□□□□□ -1.47
CAST-242ENST00000515063 PLD6Q8N2A8 252 aaKnown RBP5.85□□□□□ -1.47
CAST-242ENST00000515063 PHC3Q8NDX5 983 aa5.85□□□□□ -1.47
CAST-242ENST00000515063 GIPC2Q8TF65 315 aa5.85□□□□□ -1.47
CAST-242ENST00000515063 BCL7CQ8WUZ0 217 aaPredicted RBP5.85□□□□□ -1.47
CAST-242ENST00000515063 COX4I2Q96KJ9 171 aa5.85□□□□□ -1.47
CAST-242ENST00000515063 SNX11Q9Y5W9 270 aa5.85□□□□□ -1.47
CAST-242ENST00000515063 WIZO95785 1651 aa5.85□□□□□ -1.47
CAST-242ENST00000515063 PGRP06401 933 aa5.84□□□□□ -1.47
CAST-242ENST00000515063 ITIH2P19823 946 aa5.84□□□□□ -1.47
CAST-242ENST00000515063 CYP7A1P22680 504 aa5.84□□□□□ -1.47
CAST-242ENST00000515063 GRK4P32298 578 aa5.84□□□□□ -1.47
CAST-242ENST00000515063 OXCT1P55809 520 aa5.84□□□□□ -1.47
CAST-242ENST00000515063 ABI1Q8IZP0 508 aa5.84□□□□□ -1.47
CAST-242ENST00000515063 RSRP1Q9BUV0 290 aa5.84□□□□□ -1.47
CAST-242ENST00000515063 PAK6Q9NQU5 681 aaPredicted RBP5.84□□□□□ -1.47
CAST-242ENST00000515063 ADAM30Q9UKF2 790 aa5.84□□□□□ -1.47
CAST-242ENST00000515063 TPX2Q9ULW0 747 aaKnown RBP5.84□□□□□ -1.47
CAST-242ENST00000515063 SMARCA4P51532 1647 aa5.84□□□□□ -1.47
CAST-242ENST00000515063 GFRA2O00451 464 aa5.83□□□□□ -1.48
CAST-242ENST00000515063 CST3P01034 146 aaPredicted RBP5.83□□□□□ -1.48
CAST-242ENST00000515063 GBP2P32456 591 aaPredicted RBP5.83□□□□□ -1.48
CAST-242ENST00000515063 CLCN7P51798 805 aa5.83□□□□□ -1.48
CAST-242ENST00000515063 LMNB2Q03252 620 aa5.83□□□□□ -1.48
CAST-242ENST00000515063 SLBPQ14493 270 aaKnown RBP eCLIP5.83□□□□□ -1.48
CAST-242ENST00000515063 PLCL1Q15111 1095 aa5.83□□□□□ -1.48
CAST-242ENST00000515063 JARID2Q92833 1246 aaPredicted RBP5.83□□□□□ -1.48
CAST-242ENST00000515063 TMEM74Q96NL1 305 aa5.83□□□□□ -1.48
CAST-242ENST00000515063 MIPEPQ99797 713 aa5.83□□□□□ -1.48
CAST-242ENST00000515063 TLR6Q9Y2C9 796 aa5.83□□□□□ -1.48
CAST-242ENST00000515063 TOP2AP11388 1531 aaKnown RBP5.83□□□□□ -1.48
CAST-242ENST00000515063 EIF4G1Q04637 1599 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms