RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 MYO5AQ9Y4I1 1855 aaKnown RBP28.02■■■□□ 2.08
CLDND1-230ENST00000514537 A0A0G2JLL6 359 aaPredicted RBP28.01■■■□□ 2.07
CLDND1-230ENST00000514537 RRP1P56182 461 aaKnown RBP28.01■■■□□ 2.07
CLDND1-230ENST00000514537 CAP1Q01518 475 aa28.01■■■□□ 2.07
CLDND1-230ENST00000514537 PRRT2Q7Z6L0 340 aaPredicted RBP28.01■■■□□ 2.07
CLDND1-230ENST00000514537 METTL16Q86W50 562 aaKnown RBP28.01■■■□□ 2.07
CLDND1-230ENST00000514537 FOXP4Q8IVH2 680 aaPredicted RBP28.01■■■□□ 2.07
CLDND1-230ENST00000514537 DCTPP1Q9H773 170 aa28.01■■■□□ 2.07
CLDND1-230ENST00000514537 GOLIM4O00461 696 aa28■■■□□ 2.07
CLDND1-230ENST00000514537 ATP5JP18859 108 aa28■■■□□ 2.07
CLDND1-230ENST00000514537 RRP1BQ14684 758 aaKnown RBP28■■■□□ 2.07
CLDND1-230ENST00000514537 GPAT2Q6NUI2 795 aa28■■■□□ 2.07
CLDND1-230ENST00000514537 DNAJC2Q99543 621 aaKnown RBP28■■■□□ 2.07
CLDND1-230ENST00000514537 EFCC1Q9HA90 598 aa28■■■□□ 2.07
CLDND1-230ENST00000514537 FRMD4AQ9P2Q2 1039 aaPredicted RBP28■■■□□ 2.07
CLDND1-230ENST00000514537 PALD1Q9ULE6 856 aa28■■■□□ 2.07
CLDND1-230ENST00000514537 CAP2P40123 477 aa27.99■■■□□ 2.07
CLDND1-230ENST00000514537 FASTKD5Q7L8L6 764 aaKnown RBP27.99■■■□□ 2.07
CLDND1-230ENST00000514537 YTHDC1Q96MU7 727 aaKnown RBP27.99■■■□□ 2.07
CLDND1-230ENST00000514537 SMARCA5O60264 1052 aaPredicted RBP27.98■■■□□ 2.07
CLDND1-230ENST00000514537 PDE6AP16499 860 aa27.98■■■□□ 2.07
CLDND1-230ENST00000514537 SLC9C2Q5TAH2 1124 aa27.98■■■□□ 2.07
CLDND1-230ENST00000514537 CCDC84Q86UT8 332 aaPredicted RBP27.98■■■□□ 2.07
CLDND1-230ENST00000514537 RIOK1Q9BRS2 568 aaKnown RBP27.98■■■□□ 2.07
CLDND1-230ENST00000514537 BOLA2Q9H3K6 86 aa27.98■■■□□ 2.07
CLDND1-230ENST00000514537 PTPN22Q9Y2R2 807 aa27.98■■■□□ 2.07
CLDND1-230ENST00000514537 C17orf99Q6UX52 265 aa27.97■■■□□ 2.07
CLDND1-230ENST00000514537 EDC3Q96F86 508 aaKnown RBP27.97■■■□□ 2.07
CLDND1-230ENST00000514537 DNAJC18Q9H819 358 aa27.97■■■□□ 2.07
CLDND1-230ENST00000514537 SAP30BPQ9UHR5 308 aaKnown RBP27.97■■■□□ 2.07
CLDND1-230ENST00000514537 HTTP42858 3142 aa27.96■■■□□ 2.07
CLDND1-230ENST00000514537 USP5P45974 858 aa27.96■■■□□ 2.07
CLDND1-230ENST00000514537 ARHGEF6Q15052 776 aa27.96■■■□□ 2.07
CLDND1-230ENST00000514537 HAUS7Q99871 368 aa27.96■■■□□ 2.07
CLDND1-230ENST00000514537 PAG1Q9NWQ8 432 aa27.96■■■□□ 2.07
CLDND1-230ENST00000514537 PCDHB15Q9Y5E8 787 aa27.96■■■□□ 2.07
CLDND1-230ENST00000514537 ADGRA2Q96PE1 1338 aa27.95■■■□□ 2.07
CLDND1-230ENST00000514537 TRIM75PA6NK02 468 aa27.95■■■□□ 2.06
CLDND1-230ENST00000514537 TBC1D2Q9BYX2 928 aa27.95■■■□□ 2.06
CLDND1-230ENST00000514537 ZNF532Q9HCE3 1301 aa27.94■■■□□ 2.06
CLDND1-230ENST00000514537 MAGEB6P1A0A0J9YX57 407 aa27.94■■■□□ 2.06
CLDND1-230ENST00000514537 TCRBV5S4A2TA0A5A2 114 aa27.94■■■□□ 2.06
CLDND1-230ENST00000514537 HLA-DOAP06340 250 aa27.94■■■□□ 2.06
CLDND1-230ENST00000514537 GADL1Q6ZQY3 521 aa27.94■■■□□ 2.06
CLDND1-230ENST00000514537 CRACR2BQ8N4Y2 399 aaPredicted RBP27.94■■■□□ 2.06
CLDND1-230ENST00000514537 PARK7Q99497 189 aaKnown RBP27.94■■■□□ 2.06
CLDND1-230ENST00000514537 CPA4Q9UI42 421 aa27.94■■■□□ 2.06
CLDND1-230ENST00000514537 SLC45A1Q9Y2W3 748 aa27.94■■■□□ 2.06
CLDND1-230ENST00000514537 USP17L5A8MUK1 530 aa27.93■■■□□ 2.06
CLDND1-230ENST00000514537 SOX10P56693 466 aa27.93■■■□□ 2.06
CLDND1-230ENST00000514537 LACTBP83111 547 aaPredicted RBP27.93■■■□□ 2.06
CLDND1-230ENST00000514537 SPP2Q13103 211 aa27.93■■■□□ 2.06
CLDND1-230ENST00000514537 ZNF280CQ8ND82 737 aa27.93■■■□□ 2.06
CLDND1-230ENST00000514537 TRIM34Q9BYJ4 488 aa27.93■■■□□ 2.06
CLDND1-230ENST00000514537 DOCK1Q14185 1865 aa27.93■■■□□ 2.06
CLDND1-230ENST00000514537 CYP2C8P10632 490 aa27.92■■■□□ 2.06
CLDND1-230ENST00000514537 JAG1P78504 1218 aa27.91■■■□□ 2.06
CLDND1-230ENST00000514537 MLLT1Q03111 559 aaPredicted RBP27.91■■■□□ 2.06
CLDND1-230ENST00000514537 KIF22Q14807 665 aa27.91■■■□□ 2.06
CLDND1-230ENST00000514537 SLC4A8Q2Y0W8 1093 aa27.91■■■□□ 2.06
CLDND1-230ENST00000514537 ARHGAP39Q9C0H5 1083 aa27.91■■■□□ 2.06
CLDND1-230ENST00000514537 GINM1Q9NU53 330 aa27.91■■■□□ 2.06
CLDND1-230ENST00000514537 SIPA1L1O43166 1804 aa27.9■■■□□ 2.06
CLDND1-230ENST00000514537 ASNSP08243 561 aa27.9■■■□□ 2.06
CLDND1-230ENST00000514537 WDR18Q9BV38 432 aa27.9■■■□□ 2.06
CLDND1-230ENST00000514537 EHD4Q9H223 541 aa27.9■■■□□ 2.06
CLDND1-230ENST00000514537 AS3MTQ9HBK9 375 aa27.9■■■□□ 2.06
CLDND1-230ENST00000514537 ECHDC1Q9NTX5 307 aa27.9■■■□□ 2.06
CLDND1-230ENST00000514537 AGTPBP1Q9UPW5 1226 aa27.9■■■□□ 2.06
CLDND1-230ENST00000514537 FOCADQ5VW36 1801 aa27.9■■■□□ 2.06
CLDND1-230ENST00000514537 CDK5RAP2Q96SN8 1893 aa27.89■■■□□ 2.06
CLDND1-230ENST00000514537 BCRP11274 1271 aa27.89■■■□□ 2.06
CLDND1-230ENST00000514537 ADD2P35612 726 aa27.89■■■□□ 2.06
CLDND1-230ENST00000514537 TTC6Q86TZ1 520 aa27.89■■■□□ 2.06
CLDND1-230ENST00000514537 PROCA1Q8NCQ7 364 aaPredicted RBP27.89■■■□□ 2.06
CLDND1-230ENST00000514537 CRNKL1Q9BZJ0 848 aaKnown RBP27.89■■■□□ 2.06
CLDND1-230ENST00000514537 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.89■■■□□ 2.06
CLDND1-230ENST00000514537 PHIPQ8WWQ0 1821 aa27.88■■■□□ 2.05
CLDND1-230ENST00000514537 GNRH1P01148 92 aa27.88■■■□□ 2.05
CLDND1-230ENST00000514537 CRBNQ96SW2 442 aa27.88■■■□□ 2.05
CLDND1-230ENST00000514537 SERPINB13Q9UIV8 391 aa27.88■■■□□ 2.05
CLDND1-230ENST00000514537 GDF11O95390 407 aa27.87■■■□□ 2.05
CLDND1-230ENST00000514537 SLFNL1Q499Z3 407 aa27.87■■■□□ 2.05
CLDND1-230ENST00000514537 SH3D19Q5HYK7 790 aa27.87■■■□□ 2.05
CLDND1-230ENST00000514537 TREML2Q5T2D2 321 aa27.87■■■□□ 2.05
CLDND1-230ENST00000514537 TATDN1Q6P1N9 297 aa27.87■■■□□ 2.05
CLDND1-230ENST00000514537 LCORLQ8N3X6 602 aa27.87■■■□□ 2.05
CLDND1-230ENST00000514537 CTGFP29279 349 aa27.86■■■□□ 2.05
CLDND1-230ENST00000514537 HMGCS2P54868 508 aa27.86■■■□□ 2.05
CLDND1-230ENST00000514537 UBE3CQ15386 1083 aa27.86■■■□□ 2.05
CLDND1-230ENST00000514537 SHROOM1Q2M3G4 852 aaPredicted RBP27.86■■■□□ 2.05
CLDND1-230ENST00000514537 ARMC5Q96C12 935 aa27.86■■■□□ 2.05
CLDND1-230ENST00000514537 ZBTB21Q9ULJ3 1066 aa27.86■■■□□ 2.05
CLDND1-230ENST00000514537 PSMC4P43686 418 aa27.85■■■□□ 2.05
CLDND1-230ENST00000514537 PLCD1P51178 756 aa27.85■■■□□ 2.05
CLDND1-230ENST00000514537 BACE1P56817 501 aa27.85■■■□□ 2.05
CLDND1-230ENST00000514537 ARMT1Q9H993 441 aa27.85■■■□□ 2.05
CLDND1-230ENST00000514537 PTCH2Q9Y6C5 1203 aa27.85■■■□□ 2.05
CLDND1-230ENST00000514537 CENPFP49454 3210 aa27.85■■■□□ 2.05
CLDND1-230ENST00000514537 POLR3DP05423 398 aaPredicted RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms