RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 TEX11Q8IYF3 940 aa15.06■□□□□ 0
PVT1-203ENST00000513868 SGIP1Q9BQI5 828 aa15.06■□□□□ 0
PVT1-203ENST00000513868 FLT1P17948 1338 aa15.05■□□□□ 0
PVT1-203ENST00000513868 YDJCA8MPS7 323 aa15.05■□□□□ -0
PVT1-203ENST00000513868 ZBTB43O43298 467 aa15.05■□□□□ -0
PVT1-203ENST00000513868 DHX16O60231 1041 aaKnown RBP15.05■□□□□ -0
PVT1-203ENST00000513868 RANBP6O60518 1105 aaKnown RBP15.05■□□□□ -0
PVT1-203ENST00000513868 PPFIA3O75145 1194 aa15.05■□□□□ -0
PVT1-203ENST00000513868 ADD1P35611 737 aaKnown RBP15.05■□□□□ -0
PVT1-203ENST00000513868 METAP2P50579 478 aaKnown RBP eCLIP15.05■□□□□ -0
PVT1-203ENST00000513868 SCNN1DP51172 638 aa15.05■□□□□ -0
PVT1-203ENST00000513868 WTAPQ15007 396 aa15.05■□□□□ -0
PVT1-203ENST00000513868 SART3Q15020 963 aaKnown RBP15.05■□□□□ -0
PVT1-203ENST00000513868 NTRK3Q16288 839 aa15.05■□□□□ -0
PVT1-203ENST00000513868 SLC4A8Q2Y0W8 1093 aa15.05■□□□□ -0
PVT1-203ENST00000513868 FOXD4L6Q3SYB3 417 aaPredicted RBP15.05■□□□□ -0
PVT1-203ENST00000513868 HHIPL2Q6UWX4 724 aa15.05■□□□□ -0
PVT1-203ENST00000513868 FOXD4L3Q6VB84 417 aaPredicted RBP15.05■□□□□ -0
PVT1-203ENST00000513868 NFXL1Q6ZNB6 911 aa15.05■□□□□ -0
PVT1-203ENST00000513868 RTKN2Q8IZC4 609 aa15.05■□□□□ -0
PVT1-203ENST00000513868 TMTC2Q8N394 836 aa15.05■□□□□ -0
PVT1-203ENST00000513868 ENAHQ8N8S7 591 aaPredicted RBP15.05■□□□□ -0
PVT1-203ENST00000513868 ZSCAN10Q96SZ4 725 aaPredicted RBP15.05■□□□□ -0
PVT1-203ENST00000513868 PSMD1Q99460 953 aa15.05■□□□□ -0
PVT1-203ENST00000513868 MYL10Q9BUA6 226 aa15.05■□□□□ -0
PVT1-203ENST00000513868 SLC12A7Q9Y666 1083 aa15.05■□□□□ -0
PVT1-203ENST00000513868 TNKSO95271 1327 aa15.04■□□□□ -0
PVT1-203ENST00000513868 USP17L3A6NCW0 530 aa15.04■□□□□ -0
PVT1-203ENST00000513868 USP17L4A6NCW7 530 aa15.04■□□□□ -0
PVT1-203ENST00000513868 CCDC69A6NI79 296 aa15.04■□□□□ -0
PVT1-203ENST00000513868 PRPF40AO75400 957 aaKnown RBP15.04■□□□□ -0
PVT1-203ENST00000513868 SLC3A2P08195 630 aaKnown RBP15.04■□□□□ -0
PVT1-203ENST00000513868 USP17L1Q7RTZ2 530 aa15.04■□□□□ -0
PVT1-203ENST00000513868 MICU3Q86XE3 530 aa15.04■□□□□ -0
PVT1-203ENST00000513868 FAM184AQ8NB25 1140 aa15.04■□□□□ -0
PVT1-203ENST00000513868 DYNLL2Q96FJ2 89 aa15.04■□□□□ -0
PVT1-203ENST00000513868 UBAC1Q9BSL1 405 aa15.04■□□□□ -0
PVT1-203ENST00000513868 MRIQ9BWK5 157 aa15.04■□□□□ -0
PVT1-203ENST00000513868 SAP30BPQ9UHR5 308 aaKnown RBP15.04■□□□□ -0
PVT1-203ENST00000513868 SIPA1L1O43166 1804 aa15.04■□□□□ -0
PVT1-203ENST00000513868 PPIP5K2O43314 1243 aa15.03■□□□□ -0
PVT1-203ENST00000513868 POLD1P28340 1107 aa15.03■□□□□ -0
PVT1-203ENST00000513868 PDE4BQ07343 736 aa15.03■□□□□ -0
PVT1-203ENST00000513868 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
PVT1-203ENST00000513868 APOBEC3HQ6NTF7 200 aaKnown RBP15.03■□□□□ -0
PVT1-203ENST00000513868 ERICH2A1L162 156 aa15.03■□□□□ -0
PVT1-203ENST00000513868 WDHD1O75717 1129 aaPredicted RBP15.03■□□□□ -0
PVT1-203ENST00000513868 RCAN1P53805 252 aa15.03■□□□□ -0
PVT1-203ENST00000513868 FAM47AQ5JRC9 791 aa15.03■□□□□ -0
PVT1-203ENST00000513868 FERMT3Q86UX7 667 aa15.03■□□□□ -0
PVT1-203ENST00000513868 CCDC144CPQ8IYA2 1237 aa15.03■□□□□ -0
PVT1-203ENST00000513868 ZDHHC15Q96MV8 337 aa15.03■□□□□ -0
PVT1-203ENST00000513868 PIM2Q9P1W9 311 aa15.03■□□□□ -0
PVT1-203ENST00000513868 ATP6V1DQ9Y5K8 247 aa15.03■□□□□ -0
PVT1-203ENST00000513868 GOLGA8AA7E2F4 631 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 CPLX1O14810 134 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 NMT2O60551 498 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 CRKP46108 304 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 HDLBPQ00341 1268 aaKnown RBP15.02□□□□□ -0.01
PVT1-203ENST00000513868 DNM1Q05193 864 aaKnown RBP15.02□□□□□ -0.01
PVT1-203ENST00000513868 RESTQ13127 1097 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 CDC42EP5Q6NZY7 148 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 IQCA1Q86XH1 822 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 KIAA0825Q8IV33 1275 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 ZNF654Q8IZM8 581 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 TMEM87AQ8NBN3 555 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 TEKT1Q969V4 418 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 GDPD2Q9HCC8 539 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 ORC3Q9UBD5 711 aaPredicted RBP15.02□□□□□ -0.01
PVT1-203ENST00000513868 CNPY2Q9Y2B0 182 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 ARFGEF1Q9Y6D6 1849 aa15.02□□□□□ -0.01
PVT1-203ENST00000513868 POLR3DP05423 398 aaPredicted RBP15.01□□□□□ -0.01
PVT1-203ENST00000513868 GSE1Q14687 1217 aa15.01□□□□□ -0.01
PVT1-203ENST00000513868 AMOTL1Q8IY63 956 aa15.01□□□□□ -0.01
PVT1-203ENST00000513868 SLC44A5Q8NCS7 719 aa15.01□□□□□ -0.01
PVT1-203ENST00000513868 DDX4Q9NQI0 724 aaKnown RBP15.01□□□□□ -0.01
PVT1-203ENST00000513868 KIF3AQ9Y496 699 aa15.01□□□□□ -0.01
PVT1-203ENST00000513868 PCDHAC2Q9Y5I4 1007 aa15.01□□□□□ -0.01
PVT1-203ENST00000513868 PTGER2P43116 358 aa15□□□□□ -0.01
PVT1-203ENST00000513868 NT5C2P49902 561 aa15□□□□□ -0.01
PVT1-203ENST00000513868 KLHL40Q2TBA0 621 aa15□□□□□ -0.01
PVT1-203ENST00000513868 RCSD1Q6JBY9 416 aa15□□□□□ -0.01
PVT1-203ENST00000513868 FAM173BQ6P4H8 233 aa15□□□□□ -0.01
PVT1-203ENST00000513868 SYNE3Q6ZMZ3 975 aa15□□□□□ -0.01
PVT1-203ENST00000513868 C16orf86Q6ZW13 317 aa15□□□□□ -0.01
PVT1-203ENST00000513868 USP48Q86UV5 1035 aa15□□□□□ -0.01
PVT1-203ENST00000513868 GPT2Q8TD30 523 aa15□□□□□ -0.01
PVT1-203ENST00000513868 ZNF277Q9NRM2 450 aaPredicted RBP15□□□□□ -0.01
PVT1-203ENST00000513868 IL17RBQ9NRM6 502 aa15□□□□□ -0.01
PVT1-203ENST00000513868 USP40Q9NVE5 1235 aa15□□□□□ -0.01
PVT1-203ENST00000513868 BAZ2BQ9UIF8 2168 aaKnown RBP15□□□□□ -0.01
PVT1-203ENST00000513868 H3BQV1 296 aa15□□□□□ -0.01
PVT1-203ENST00000513868 RASA1P20936 1047 aa15□□□□□ -0.01
PVT1-203ENST00000513868 TFAP4Q01664 338 aa15□□□□□ -0.01
PVT1-203ENST00000513868 TROAPQ12815 778 aa15□□□□□ -0.01
PVT1-203ENST00000513868 IFIT1BQ5T764 474 aaKnown RBP15□□□□□ -0.01
PVT1-203ENST00000513868 IFFO2Q5TF58 517 aa15□□□□□ -0.01
PVT1-203ENST00000513868 FANCBQ8NB91 859 aa15□□□□□ -0.01
PVT1-203ENST00000513868 PHKBQ93100 1093 aa15□□□□□ -0.01
PVT1-203ENST00000513868 VPS33BQ9H267 617 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms