RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-210ENST00000513582 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 GOLGA6BA6NDN3 693 aa12.6□□□□□ -0.39
PDCD6-210ENST00000513582 EIF3HO15372 352 aaKnown RBP eCLIP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 TATP17735 454 aaPredicted RBP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 CLNS1AP54105 237 aaKnown RBP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 COG1Q8WTW3 980 aa12.6□□□□□ -0.39
PDCD6-210ENST00000513582 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 SHOX2O60902 331 aaPredicted RBP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 GCFC2P16383 781 aaKnown RBP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 PDCLQ13371 301 aa12.6□□□□□ -0.39
PDCD6-210ENST00000513582 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 ZNF526Q8TF50 670 aaPredicted RBP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 DBNDD2Q9BQY9 259 aa12.6□□□□□ -0.39
PDCD6-210ENST00000513582 LLPHQ9BRT6 129 aaKnown RBP12.6□□□□□ -0.39
PDCD6-210ENST00000513582 HDAC6Q9UBN7 1215 aa12.6□□□□□ -0.39
PDCD6-210ENST00000513582 FOXN1O15353 648 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 SRGAP2O75044 1071 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 RPSAP08865 295 aaKnown RBP12.59□□□□□ -0.39
PDCD6-210ENST00000513582 CALRP27797 417 aaKnown RBP12.59□□□□□ -0.39
PDCD6-210ENST00000513582 ATP1A2P50993 1020 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 PPFIA1Q13136 1202 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 E2F5Q15329 346 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 PPFIBP1Q86W92 1011 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 TEX11Q8IYF3 940 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 TEX13AQ9BXU3 409 aaPredicted RBP12.59□□□□□ -0.39
PDCD6-210ENST00000513582 C19orf44Q9H6X5 657 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 SAMSN1Q9NSI8 373 aaKnown RBP12.59□□□□□ -0.39
PDCD6-210ENST00000513582 HOOK1Q9UJC3 728 aaKnown RBP12.59□□□□□ -0.39
PDCD6-210ENST00000513582 MYO6Q9UM54 1294 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 AGPSO00116 658 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 TEX33O43247 280 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 MYBL2P10244 700 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 RBL2Q08999 1139 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 SCLT1Q96NL6 688 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 VIPAS39Q9H9C1 493 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 TMEM2Q9UHN6 1383 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 CPS1P31327 1500 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 IDH1O75874 414 aaKnown RBP12.59□□□□□ -0.39
PDCD6-210ENST00000513582 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
PDCD6-210ENST00000513582 NAA25Q14CX7 972 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 SPECC1Q5M775 1068 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 CEP85LQ5SZL2 805 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 C8orf76Q96K31 380 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 TRIM6Q9C030 488 aaPredicted RBP12.59□□□□□ -0.39
PDCD6-210ENST00000513582 KLC4Q9NSK0 619 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
PDCD6-210ENST00000513582 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.39
PDCD6-210ENST00000513582 FNTAP49354 379 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 FMR1Q06787 632 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDCD6-210ENST00000513582 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.58□□□□□ -0.43e-7■■■□□ 15.3
PDCD6-210ENST00000513582 SELENOOQ9BVL4 669 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 ARHGEF10O15013 1369 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 MRPS25P82663 173 aaKnown RBP12.58□□□□□ -0.4
PDCD6-210ENST00000513582 MYSM1Q5VVJ2 828 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 WDR93Q6P2C0 686 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 ARHGEF25Q86VW2 580 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 GRIN2DO15399 1336 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 ALDH1L1O75891 902 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 PDHBP11177 359 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 CDR1P51861 262 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 DDR1Q08345 913 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 KSR2Q6VAB6 950 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 FOXP4Q8IVH2 680 aaPredicted RBP12.58□□□□□ -0.4
PDCD6-210ENST00000513582 GUCA1BQ9UMX6 200 aa12.58□□□□□ -0.4
PDCD6-210ENST00000513582 BMP6P22004 513 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 CMA1P23946 247 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 PEX19P40855 299 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 CCNHP51946 323 aaPredicted RBP12.57□□□□□ -0.4
PDCD6-210ENST00000513582 PREPLQ4J6C6 727 aaPredicted RBP12.57□□□□□ -0.4
PDCD6-210ENST00000513582 ANO1Q5XXA6 986 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 KCTD16Q68DU8 428 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 TRIM10Q9UDY6 481 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 TUBE1Q9UJT0 475 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
PDCD6-210ENST00000513582 A0A0G2JLW4 131 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 MEFVO15553 781 aaPredicted RBP12.57□□□□□ -0.4
PDCD6-210ENST00000513582 FDPSP14324 419 aaKnown RBP12.57□□□□□ -0.4
PDCD6-210ENST00000513582 USP14P54578 494 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 TBC1D22AQ8WUA7 517 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 MMS19Q96T76 1030 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 A1CFQ9NQ94 594 aaKnown RBP12.57□□□□□ -0.4
PDCD6-210ENST00000513582 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
PDCD6-210ENST00000513582 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
PDCD6-210ENST00000513582 KIF28PB7ZC32 967 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 TUBB4BP68371 445 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 FMNL3Q8IVF7 1028 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 JMYQ8N9B5 988 aa12.57□□□□□ -0.4
PDCD6-210ENST00000513582 COL15A1P39059 1388 aa12.56□□□□□ -0.4
PDCD6-210ENST00000513582 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
PDCD6-210ENST00000513582 PPP1R12BO60237 982 aaPredicted RBP12.56□□□□□ -0.4
PDCD6-210ENST00000513582 YEATS4O95619 227 aa12.56□□□□□ -0.4
PDCD6-210ENST00000513582 TUBBP07437 444 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms