RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CNNM2Q9H8M5 875 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 UBA7P41226 1012 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 MAP9Q49MG5 647 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 BTG4Q9NY30 223 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 SOWAHDA6NJG2 315 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 KRT9P35527 623 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 PDE11AQ9HCR9 933 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 CCDC194A0A1B0GVG4 234 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 IKBKBO14920 756 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 CASP1P29466 404 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 NYAP1Q6ZVC0 841 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 VSTM4Q8IW00 320 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 IRX2Q9BZI1 471 aaPredicted RBP16.88■□□□□ 0.29
USP38-202ENST00000510377 ZMYM6O95789 1325 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 TMEM131LA2VDJ0 1609 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 PATL2C9JE40 543 aaKnown RBP16.88■□□□□ 0.29
USP38-202ENST00000510377 TOGARAM2Q6ZUX3 1019 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 ESR2Q92731 530 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 KNDC1Q76NI1 1749 aa16.88■□□□□ 0.29
USP38-202ENST00000510377 EPS15P42566 896 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 RASSF4Q9H2L5 321 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 SLFN14P0C7P3 912 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 FDPSP14324 419 aaKnown RBP16.87■□□□□ 0.29
USP38-202ENST00000510377 STAT6P42226 847 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 CNGA4Q8IV77 575 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 DNAJC10Q8IXB1 793 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 ENGASEQ8NFI3 743 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 ALDH8A1Q9H2A2 487 aaPredicted RBP16.87■□□□□ 0.29
USP38-202ENST00000510377 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 ERCC3P19447 782 aa16.87■□□□□ 0.29
USP38-202ENST00000510377 NAPGQ99747 312 aaPredicted RBP16.87■□□□□ 0.29
USP38-202ENST00000510377 NPHP4O75161 1426 aaPredicted RBP16.86■□□□□ 0.29
USP38-202ENST00000510377 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
USP38-202ENST00000510377 SCARF1Q14162 830 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 LONRF2Q1L5Z9 754 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 CCDC122Q5T0U0 273 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 MACROD2A1Z1Q3 448 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 PDE6AP16499 860 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 WDR24Q96S15 920 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 JAG2Q9Y219 1238 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 PHLPP2Q6ZVD8 1323 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 KRT2P35908 639 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 PHKA1P46020 1223 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 CCDC178Q5BJE1 867 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 RBM43Q6ZSC3 357 aaKnown RBP16.86■□□□□ 0.29
USP38-202ENST00000510377 FAM107BQ9H098 131 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 MAN1B1Q9UKM7 699 aa16.86■□□□□ 0.29
USP38-202ENST00000510377 IDEP14735 1019 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 CCDC96Q2M329 555 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 TDRD12Q587J7 1177 aaKnown RBP16.85■□□□□ 0.29
USP38-202ENST00000510377 WWC2Q6AWC2 1192 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 SYNE4Q8N205 404 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 PSMB7Q99436 277 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.85■□□□□ 0.29
USP38-202ENST00000510377 TSPY2A6NKD2 308 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 DEXIO95424 95 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 SNAP23O00161 211 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 STX10O60499 249 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 CASP14P31944 242 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 MTF1Q14872 753 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 VAT1LQ9HCJ6 419 aa16.85■□□□□ 0.29
USP38-202ENST00000510377 LUC7L2Q9Y383 392 aaKnown RBP16.85■□□□□ 0.29
USP38-202ENST00000510377 ANKRD65E5RJM6 399 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 KIAA0754O94854 1291 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 SHC4Q6S5L8 630 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 PIK3AP1Q6ZUJ8 805 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 SLC35F6Q8N357 371 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
USP38-202ENST00000510377 WWC3Q9ULE0 1092 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 TMTC2Q8N394 836 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 ACRBPQ8NEB7 543 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 CSRNP2Q9H175 543 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 AKR1B10O60218 316 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 RBL2Q08999 1139 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 IQUBQ8NA54 791 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 GREM2Q9H772 168 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 PCDHB6Q9Y5E3 794 aa16.84■□□□□ 0.29
USP38-202ENST00000510377 ERBB3P21860 1342 aa16.83■□□□□ 0.29
USP38-202ENST00000510377 SPAG1Q07617 926 aa16.83■□□□□ 0.29
USP38-202ENST00000510377 IQCEQ6IPM2 695 aa16.83■□□□□ 0.29
USP38-202ENST00000510377 CACNA2D4Q7Z3S7 1137 aa16.83■□□□□ 0.29
USP38-202ENST00000510377 RGS22Q8NE09 1264 aa16.83■□□□□ 0.29
USP38-202ENST00000510377 ENC1O14682 589 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 CDC27P30260 824 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 ATP2B2Q01814 1243 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 PDIA6Q15084 440 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 CYB5R4Q7L1T6 521 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 TBC1D10CQ8IV04 446 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 PLEKHA4Q9H4M7 779 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 PXDNLA1KZ92 1463 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 PRKAB2O43741 272 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 ZMYND10O75800 440 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 IVLP07476 585 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 TCIRG1Q13488 830 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 AKNAD1Q5T1N1 836 aa16.83■□□□□ 0.28
USP38-202ENST00000510377 IFNL3Q8IZI9 196 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms