RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
TSPAN17-206ENST00000507471 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
TSPAN17-206ENST00000507471 SPP2Q13103 211 aa17.12■□□□□ 0.33
TSPAN17-206ENST00000507471 PI16Q6UXB8 463 aa17.12■□□□□ 0.33
TSPAN17-206ENST00000507471 NSUN4Q96CB9 384 aaKnown RBP17.12■□□□□ 0.33
TSPAN17-206ENST00000507471 CRISPLD2Q9H0B8 497 aa17.12■□□□□ 0.33
TSPAN17-206ENST00000507471 ALPK3Q96L96 1907 aa17.11■□□□□ 0.33
TSPAN17-206ENST00000507471 MTX1Q13505 466 aa17.11■□□□□ 0.33
TSPAN17-206ENST00000507471 TBC1D9Q6ZT07 1266 aa17.11■□□□□ 0.33
TSPAN17-206ENST00000507471 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
TSPAN17-206ENST00000507471 ZNF280CQ8ND82 737 aa17.11■□□□□ 0.33
TSPAN17-206ENST00000507471 NEUROD6Q96NK8 337 aa17.11■□□□□ 0.33
TSPAN17-206ENST00000507471 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.11■□□□□ 0.33
TSPAN17-206ENST00000507471 TRIOBPQ9H2D6 2365 aa17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 A0A1W2PPC1 479 aa17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 GNAI3P08754 354 aa17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 CAP2P40123 477 aa17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 HMGCS2P54868 508 aa17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 GSTO1P78417 241 aa17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 DIS3LQ8TF46 1054 aaKnown RBP17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 PAWRQ96IZ0 340 aaKnown RBP17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 TBC1D2Q9BYX2 928 aa17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 SIPA1L1O43166 1804 aa17.1■□□□□ 0.33
TSPAN17-206ENST00000507471 LDHCP07864 332 aa17.09■□□□□ 0.33
TSPAN17-206ENST00000507471 ARID4AP29374 1257 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-206ENST00000507471 GCLCP48506 637 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-206ENST00000507471 PLXNB2O15031 1838 aa17.09■□□□□ 0.33
TSPAN17-206ENST00000507471 CEP290O15078 2479 aa17.08■□□□□ 0.33
TSPAN17-206ENST00000507471 DOCK3Q8IZD9 2030 aa17.08■□□□□ 0.33
TSPAN17-206ENST00000507471 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 SOX1O00570 391 aaPredicted RBP17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 HMGCRP04035 888 aa17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 RARSP54136 660 aaKnown RBP17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 PABPC4Q13310 644 aaKnown RBP eCLIP17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 SH3D19Q5HYK7 790 aa17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 NECAB2Q7Z6G3 386 aa17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 RAI14Q9P0K7 980 aa17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 STAP2Q9UGK3 403 aa17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 GJD2Q9UKL4 321 aa17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 RANBP2P49792 3224 aaKnown RBP17.08■□□□□ 0.32
TSPAN17-206ENST00000507471 MAST2Q6P0Q8 1798 aa17.07■□□□□ 0.32
TSPAN17-206ENST00000507471 MCAMP43121 646 aa17.07■□□□□ 0.32
TSPAN17-206ENST00000507471 TRIM32Q13049 653 aa17.07■□□□□ 0.32
TSPAN17-206ENST00000507471 GORABQ5T7V8 394 aa17.07■□□□□ 0.32
TSPAN17-206ENST00000507471 TEX11Q8IYF3 940 aa17.07■□□□□ 0.32
TSPAN17-206ENST00000507471 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
TSPAN17-206ENST00000507471 HERC5Q9UII4 1024 aaKnown RBP17.07■□□□□ 0.32
TSPAN17-206ENST00000507471 RPTORQ8N122 1335 aa17.06■□□□□ 0.32
TSPAN17-206ENST00000507471 ANKLE1Q8NAG6 615 aa17.06■□□□□ 0.32
TSPAN17-206ENST00000507471 SH3RF3Q8TEJ3 882 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-206ENST00000507471 LRCH3Q96II8 777 aa17.06■□□□□ 0.32
TSPAN17-206ENST00000507471 AS3MTQ9HBK9 375 aa17.06■□□□□ 0.32
TSPAN17-206ENST00000507471 MORF4L1Q9UBU8 362 aa17.06■□□□□ 0.32
TSPAN17-206ENST00000507471 DDX60LQ5H9U9 1706 aaKnown RBP17.06■□□□□ 0.32
TSPAN17-206ENST00000507471 PNMA6EA0A0J9YXQ4 647 aa17.05■□□□□ 0.32
TSPAN17-206ENST00000507471 MTMR2Q13614 643 aa17.05■□□□□ 0.32
TSPAN17-206ENST00000507471 TRIB2Q92519 343 aa17.05■□□□□ 0.32
TSPAN17-206ENST00000507471 HMX1Q9NP08 348 aaPredicted RBP17.05■□□□□ 0.32
TSPAN17-206ENST00000507471 LRP2BPQ9P2M1 347 aa17.05■□□□□ 0.32
TSPAN17-206ENST00000507471 PI4KBQ9UBF8 816 aa17.05■□□□□ 0.32
TSPAN17-206ENST00000507471 CDK5RAP2Q96SN8 1893 aa17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 UQCRFS1P1P0C7P4 283 aa17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 JAG1P78504 1218 aa17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 C7orf61Q8IZ16 206 aa17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 GDF15Q99988 308 aa17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 WDR18Q9BV38 432 aa17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 DNAJC18Q9H819 358 aa17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 FOCADQ5VW36 1801 aa17.04■□□□□ 0.32
TSPAN17-206ENST00000507471 PEX10O60683 326 aa17.03■□□□□ 0.32
TSPAN17-206ENST00000507471 BACE1P56817 501 aa17.03■□□□□ 0.32
TSPAN17-206ENST00000507471 IRX3P78415 501 aaPredicted RBP17.03■□□□□ 0.32
TSPAN17-206ENST00000507471 NOL10Q9BSC4 688 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-206ENST00000507471 NBPF3Q9H094 633 aa17.03■□□□□ 0.32
TSPAN17-206ENST00000507471 AATFQ9NY61 560 aaKnown RBP eCLIP17.03■□□□□ 0.32
TSPAN17-206ENST00000507471 TNNQ9UQP3 1299 aa17.03■□□□□ 0.32
TSPAN17-206ENST00000507471 GNAI2P04899 355 aa17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 ASNSP08243 561 aa17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 CYP2B6P20813 491 aa17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 HOXA7P31268 230 aaPredicted RBP17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 BMP8BP34820 402 aa17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 SHROOM1Q2M3G4 852 aaPredicted RBP17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 NAA16Q6N069 864 aaPredicted RBP17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 P2RX7Q99572 595 aaKnown RBP17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 TXNRD2Q9NNW7 524 aa17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 SNRKQ9NRH2 765 aa17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 TMOD4Q9NZQ9 345 aa17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 OGDHLQ9ULD0 1010 aa17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 ZMYND8Q9ULU4 1186 aaPredicted RBP17.02■□□□□ 0.32
TSPAN17-206ENST00000507471 FLT1P17948 1338 aa17.01■□□□□ 0.31
TSPAN17-206ENST00000507471 BAG3O95817 575 aa17.01■□□□□ 0.31
TSPAN17-206ENST00000507471 TRIM27P14373 513 aa17.01■□□□□ 0.31
TSPAN17-206ENST00000507471 HERVK_113P62684 666 aa17.01■□□□□ 0.31
TSPAN17-206ENST00000507471 MAP3K21Q5TCX8 1036 aa17.01■□□□□ 0.31
TSPAN17-206ENST00000507471 ADGRA1Q86SQ6 560 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms