RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 INHBEP58166 350 aa23.29■■□□□ 1.32
LMNA-221ENST00000506981 MAP3K10Q02779 954 aa23.29■■□□□ 1.32
LMNA-221ENST00000506981 ARMT1Q9H993 441 aa23.29■■□□□ 1.32
LMNA-221ENST00000506981 PICK1Q9NRD5 415 aa23.29■■□□□ 1.32
LMNA-221ENST00000506981 SAGE1Q9NXZ1 904 aa23.29■■□□□ 1.32
LMNA-221ENST00000506981 PALD1Q9ULE6 856 aa23.29■■□□□ 1.32
LMNA-221ENST00000506981 PTPRFP10586 1907 aa23.29■■□□□ 1.32
LMNA-221ENST00000506981 RNF113AO15541 343 aaKnown RBP23.28■■□□□ 1.32
LMNA-221ENST00000506981 GJA5P36382 358 aa23.28■■□□□ 1.32
LMNA-221ENST00000506981 TM4SF4P48230 202 aa23.28■■□□□ 1.32
LMNA-221ENST00000506981 SCYL3Q8IZE3 742 aa23.28■■□□□ 1.32
LMNA-221ENST00000506981 CNKSR2Q8WXI2 1034 aa23.28■■□□□ 1.32
LMNA-221ENST00000506981 APPBP2Q92624 585 aa23.28■■□□□ 1.32
LMNA-221ENST00000506981 DDRGK1Q96HY6 314 aa23.28■■□□□ 1.32
LMNA-221ENST00000506981 CASP8AP2Q9UKL3 1982 aa23.28■■□□□ 1.32
LMNA-221ENST00000506981 FAM196BA6NMK8 535 aa23.27■■□□□ 1.32
LMNA-221ENST00000506981 PHF20L1A8MW92 1017 aa23.27■■□□□ 1.32
LMNA-221ENST00000506981 CTNND1O60716 968 aaKnown RBP23.27■■□□□ 1.32
LMNA-221ENST00000506981 GTF2A2P52657 109 aa23.27■■□□□ 1.32
LMNA-221ENST00000506981 PPATQ06203 517 aa23.27■■□□□ 1.32
LMNA-221ENST00000506981 PPIL2Q13356 520 aa23.27■■□□□ 1.32
LMNA-221ENST00000506981 SLFNL1Q499Z3 407 aa23.27■■□□□ 1.32
LMNA-221ENST00000506981 TTC6Q86TZ1 520 aa23.27■■□□□ 1.32
LMNA-221ENST00000506981 FOXP4Q8IVH2 680 aaPredicted RBP23.27■■□□□ 1.32
LMNA-221ENST00000506981 TRPA1O75762 1119 aa23.26■■□□□ 1.31
LMNA-221ENST00000506981 POLR3DP05423 398 aaPredicted RBP23.26■■□□□ 1.31
LMNA-221ENST00000506981 CENPBP07199 599 aaPredicted RBP23.26■■□□□ 1.31
LMNA-221ENST00000506981 HSPA8P11142 646 aaKnown RBP23.26■■□□□ 1.31
LMNA-221ENST00000506981 LBX1P52954 281 aa23.26■■□□□ 1.31
LMNA-221ENST00000506981 SLC4A8Q2Y0W8 1093 aa23.26■■□□□ 1.31
LMNA-221ENST00000506981 OTUD7BQ6GQQ9 843 aa23.26■■□□□ 1.31
LMNA-221ENST00000506981 SDR42E1Q8WUS8 393 aa23.26■■□□□ 1.31
LMNA-221ENST00000506981 EVI5LQ96CN4 794 aa23.26■■□□□ 1.31
LMNA-221ENST00000506981 RNF186Q9NXI6 227 aa23.26■■□□□ 1.31
LMNA-221ENST00000506981 TSKSQ9UJT2 592 aa23.26■■□□□ 1.31
LMNA-221ENST00000506981 ALDH1A1P00352 501 aa23.25■■□□□ 1.31
LMNA-221ENST00000506981 CHGBP05060 677 aa23.25■■□□□ 1.31
LMNA-221ENST00000506981 NEFLP07196 543 aa23.25■■□□□ 1.31
LMNA-221ENST00000506981 AMOTL1Q8IY63 956 aa23.25■■□□□ 1.31
LMNA-221ENST00000506981 ATP8A2Q9NTI2 1148 aa23.25■■□□□ 1.31
LMNA-221ENST00000506981 MCM9Q9NXL9 1143 aa23.25■■□□□ 1.31
LMNA-221ENST00000506981 SLURP2P0DP57 97 aa23.24■■□□□ 1.31
LMNA-221ENST00000506981 SNAPC2Q13487 334 aa23.24■■□□□ 1.31
LMNA-221ENST00000506981 PUS7LQ9H0K6 701 aaKnown RBP23.24■■□□□ 1.31
LMNA-221ENST00000506981 CCL15-CCL14A0A0B4J2E2 113 aa23.23■■□□□ 1.31
LMNA-221ENST00000506981 TRIM6-TRIM34B2RNG4 842 aa23.23■■□□□ 1.31
LMNA-221ENST00000506981 CCL15Q16663 113 aa23.23■■□□□ 1.31
LMNA-221ENST00000506981 IFNL1Q8IU54 200 aa23.23■■□□□ 1.31
LMNA-221ENST00000506981 PLEKHM2Q8IWE5 1019 aa23.23■■□□□ 1.31
LMNA-221ENST00000506981 EHD4Q9H223 541 aa23.23■■□□□ 1.31
LMNA-221ENST00000506981 DCP1AQ9NPI6 582 aaPredicted RBP23.23■■□□□ 1.31
LMNA-221ENST00000506981 PRDM10Q9NQV6 1147 aa23.23■■□□□ 1.31
LMNA-221ENST00000506981 SERPINB13Q9UIV8 391 aa23.23■■□□□ 1.31
LMNA-221ENST00000506981 SLC4A4Q9Y6R1 1079 aa23.23■■□□□ 1.31
LMNA-221ENST00000506981 IRF6O14896 467 aa23.22■■□□□ 1.31
LMNA-221ENST00000506981 CETPP11597 493 aa23.22■■□□□ 1.31
LMNA-221ENST00000506981 OSBPL3Q9H4L5 887 aa23.22■■□□□ 1.31
LMNA-221ENST00000506981 PRKAB2O43741 272 aa23.21■■□□□ 1.31
LMNA-221ENST00000506981 PTPRAP18433 802 aa23.21■■□□□ 1.31
LMNA-221ENST00000506981 CAP2P40123 477 aa23.21■■□□□ 1.31
LMNA-221ENST00000506981 METTL16Q86W50 562 aaKnown RBP23.21■■□□□ 1.31
LMNA-221ENST00000506981 OSBP2Q969R2 916 aa23.21■■□□□ 1.31
LMNA-221ENST00000506981 TESPA1A2RU30 521 aaPredicted RBP23.2■■□□□ 1.3
LMNA-221ENST00000506981 GPAA1O43292 621 aa23.2■■□□□ 1.3
LMNA-221ENST00000506981 GNAT2P19087 354 aa23.2■■□□□ 1.3
LMNA-221ENST00000506981 RILPL2Q969X0 211 aa23.2■■□□□ 1.3
LMNA-221ENST00000506981 MS4A4AQ96JQ5 239 aa23.2■■□□□ 1.3
LMNA-221ENST00000506981 DNAJC18Q9H819 358 aa23.2■■□□□ 1.3
LMNA-221ENST00000506981 ZHX2Q9Y6X8 837 aa23.2■■□□□ 1.3
LMNA-221ENST00000506981 IGF2BP3O00425 579 aaKnown RBP eCLIP23.19■■□□□ 1.3
LMNA-221ENST00000506981 ASNSP08243 561 aa23.19■■□□□ 1.3
LMNA-221ENST00000506981 BRI3BPQ8WY22 251 aa23.19■■□□□ 1.3
LMNA-221ENST00000506981 STRBPQ96SI9 672 aaKnown RBP23.19■■□□□ 1.3
LMNA-221ENST00000506981 TBC1D2Q9BYX2 928 aa23.19■■□□□ 1.3
LMNA-221ENST00000506981 KCNH4Q9UQ05 1017 aa23.19■■□□□ 1.3
LMNA-221ENST00000506981 M0R2C6 588 aa23.18■■□□□ 1.3
LMNA-221ENST00000506981 CXCL11O14625 94 aa23.18■■□□□ 1.3
LMNA-221ENST00000506981 ZMYM1Q5SVZ6 1142 aa23.18■■□□□ 1.3
LMNA-221ENST00000506981 TICAM2Q86XR7 235 aa23.18■■□□□ 1.3
LMNA-221ENST00000506981 AS3MTQ9HBK9 375 aa23.18■■□□□ 1.3
LMNA-221ENST00000506981 GINM1Q9NU53 330 aa23.18■■□□□ 1.3
LMNA-221ENST00000506981 LOC285556D6RIA3 1793 aa23.17■■□□□ 1.3
LMNA-221ENST00000506981 TBC1D8O95759 1140 aa23.17■■□□□ 1.3
LMNA-221ENST00000506981 PLCD1P51178 756 aa23.17■■□□□ 1.3
LMNA-221ENST00000506981 ARPP21Q9UBL0 812 aaPredicted RBP23.17■■□□□ 1.3
LMNA-221ENST00000506981 USP17L5A8MUK1 530 aa23.16■■□□□ 1.3
LMNA-221ENST00000506981 GDF11O95390 407 aa23.16■■□□□ 1.3
LMNA-221ENST00000506981 APPP05067 770 aa23.16■■□□□ 1.3
LMNA-221ENST00000506981 GIMAP6Q6P9H5 292 aa23.16■■□□□ 1.3
LMNA-221ENST00000506981 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.16■■□□□ 1.3
LMNA-221ENST00000506981 TAOK2Q9UL54 1235 aa23.16■■□□□ 1.3
LMNA-221ENST00000506981 TRIM75PA6NK02 468 aa23.15■■□□□ 1.3
LMNA-221ENST00000506981 USP17L12C9JPN9 530 aa23.15■■□□□ 1.3
LMNA-221ENST00000506981 USP17L21D6R901 530 aa23.15■■□□□ 1.3
LMNA-221ENST00000506981 CYP2D6P10635 497 aa23.15■■□□□ 1.3
LMNA-221ENST00000506981 TDO2P48775 406 aa23.15■■□□□ 1.3
LMNA-221ENST00000506981 RRP1BQ14684 758 aaKnown RBP23.15■■□□□ 1.3
LMNA-221ENST00000506981 TAF1CQ15572 869 aaPredicted RBP23.15■■□□□ 1.3
LMNA-221ENST00000506981 TATDN1Q6P1N9 297 aa23.15■■□□□ 1.3
LMNA-221ENST00000506981 SEC62Q99442 399 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms