RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 EHMT1Q9H9B1 1298 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 WDR37Q9Y2I8 494 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 POGZQ7Z3K3 1410 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 TMCC1O94876 653 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 TBC1D8O95759 1140 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 CCNCP24863 283 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 ANKRD42Q8N9B4 389 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 TRIM58Q8NG06 486 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 R3HDM2Q9Y2K5 976 aaKnown RBP6.97□□□□□ -1.29
CLCN3-204ENST00000504131 PCDHGA3Q9Y5H0 932 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 CAPN1P07384 714 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 POTEIP0CG38 1075 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 KRT5P13647 590 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 CYP11B2P19099 503 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 ANKRD13BQ86YJ7 626 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 RNF10Q8N5U6 811 aaKnown RBP6.97□□□□□ -1.29
CLCN3-204ENST00000504131 EZH1Q92800 747 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-204ENST00000504131 RASAL2Q9UJF2 1139 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 NESP48681 1621 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 GOLGA8MH3BSY2 632 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 ATP2C2O75185 946 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 FLOT1O75955 427 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 ACTN2P35609 894 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 ST13P4Q8IZP2 240 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-204ENST00000504131 NGDNQ8NEJ9 315 aaKnown RBP6.97□□□□□ -1.29
CLCN3-204ENST00000504131 FBF1Q8TES7 1133 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 RUBCNQ92622 972 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 RUNDC3BQ96NL0 473 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 ALS2CR12Q96Q35 445 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 UQCC2Q9BRT2 126 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 DNAI1Q9UI46 699 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 ZNF24P17028 368 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 CHKAP35790 457 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 EIF4A2Q14240 407 aaKnown RBP6.97□□□□□ -1.29
CLCN3-204ENST00000504131 RASIP1Q5U651 963 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 ERP27Q96DN0 273 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 TBC1D2Q9BYX2 928 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 PLCB1Q9NQ66 1216 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 ZBTB21Q9ULJ3 1066 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 SETD5Q9C0A6 1442 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 CUL7Q14999 1698 aa6.97□□□□□ -1.29
CLCN3-204ENST00000504131 CCNG2Q16589 344 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 FERMT3Q86UX7 667 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 MAP7D3Q8IWC1 876 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 CERKQ8TCT0 537 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 CNNM2Q9H8M5 875 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 BATF3Q9NR55 127 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 GSTTP1A0A1W2PQM5 241 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 APOL1O14791 398 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 HSPA8P11142 646 aaKnown RBP6.96□□□□□ -1.29
CLCN3-204ENST00000504131 PTGS2P35354 604 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 ST13P50502 369 aaKnown RBP6.96□□□□□ -1.29
CLCN3-204ENST00000504131 KLC1Q07866 573 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 LONRF1Q17RB8 773 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.96□□□□□ -1.29
CLCN3-204ENST00000504131 SPOCK2Q92563 424 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.96□□□□□ -1.29
CLCN3-204ENST00000504131 PCSK1NQ9UHG2 260 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 TRIM35Q9UPQ4 493 aa6.96□□□□□ -1.29
CLCN3-204ENST00000504131 PBRM1Q86U86 1689 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 WDR46O15213 610 aaKnown RBP6.96□□□□□ -1.3
CLCN3-204ENST00000504131 GUCY1B2O75343 617 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 C15orf59Q2T9L4 293 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-204ENST00000504131 CFAP100Q494V2 611 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 MFN1Q8IWA4 741 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 SLC44A2Q8IWA5 706 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-204ENST00000504131 PARD3BQ8TEW8 1205 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 TEKT4Q8WW24 435 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 PCMTD1Q96MG8 357 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-204ENST00000504131 ARFGAP3Q9NP61 516 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 NRBP1Q9UHY1 535 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 CHIC2Q9UKJ5 165 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 VPS8Q8N3P4 1428 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 VEPH1Q14D04 833 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 ZBTB41Q5SVQ8 909 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 SND1Q7KZF4 910 aaKnown RBP eCLIP6.96□□□□□ -1.33e-6■■□□□ 11.7
CLCN3-204ENST00000504131 RSPH3Q86UC2 560 aa6.96□□□□□ -1.3
CLCN3-204ENST00000504131 RBM46Q8TBY0 533 aaKnown RBP6.96□□□□□ -1.3
CLCN3-204ENST00000504131 SFI1A8K8P3 1242 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 TULP2O00295 520 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 ATP5DP30049 168 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 ALDH3A1P30838 453 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 PAPOLAP51003 745 aaKnown RBP6.95□□□□□ -1.3
CLCN3-204ENST00000504131 WASHC4Q2M389 1173 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 KANK4Q5T7N3 995 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-204ENST00000504131 INTS8Q75QN2 995 aaKnown RBP6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CHPFQ8IZ52 775 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 RFWD2Q8NHY2 731 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 AQRO60306 1485 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLCN3-204ENST00000504131 AKNAQ7Z591 1439 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 DDX5P17844 614 aaKnown RBP6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CATIPQ7Z7H3 387 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 RASEFQ8IZ41 740 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CCDC155Q8N6L0 562 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 SMARCE1Q969G3 411 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 GMEB1Q9Y692 573 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 ABCA10Q8WWZ4 1543 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 TRPA1O75762 1119 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 ADCY5O95622 1261 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms