RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 SBK1Q52WX2 424 aa15.86■□□□□ 0.13
PRDM2-213ENST00000503842 MAPKAPK5Q8IW41 473 aa15.86■□□□□ 0.13
PRDM2-213ENST00000503842 DDRGK1Q96HY6 314 aa15.86■□□□□ 0.13
PRDM2-213ENST00000503842 TDRD3Q9H7E2 651 aaKnown RBP15.86■□□□□ 0.13
PRDM2-213ENST00000503842 DDX4Q9NQI0 724 aaKnown RBP15.86■□□□□ 0.13
PRDM2-213ENST00000503842 BOLA1Q9Y3E2 137 aa15.86■□□□□ 0.13
PRDM2-213ENST00000503842 SNX14Q9Y5W7 946 aa15.86■□□□□ 0.13
PRDM2-213ENST00000503842 TAF6LQ9Y6J9 622 aa15.86■□□□□ 0.13
PRDM2-213ENST00000503842 NFIAQ12857 509 aa15.85■□□□□ 0.13
PRDM2-213ENST00000503842 IMMTQ16891 758 aaKnown RBP15.85■□□□□ 0.13
PRDM2-213ENST00000503842 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
PRDM2-213ENST00000503842 CTR9Q6PD62 1173 aa15.85■□□□□ 0.13
PRDM2-213ENST00000503842 SAMD7Q7Z3H4 446 aa15.85■□□□□ 0.13
PRDM2-213ENST00000503842 NBPF3Q9H094 633 aa15.85■□□□□ 0.13
PRDM2-213ENST00000503842 ARPP21Q9UBL0 812 aaPredicted RBP15.85■□□□□ 0.13
PRDM2-213ENST00000503842 ZNF70Q9UC06 446 aaPredicted RBP15.85■□□□□ 0.13
PRDM2-213ENST00000503842 FAM198AQ9UFP1 575 aa15.85■□□□□ 0.13
PRDM2-213ENST00000503842 USP17L12C9JPN9 530 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 USP17L21D6R901 530 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 ZKSCAN1P17029 563 aaPredicted RBP15.84■□□□□ 0.13
PRDM2-213ENST00000503842 EPS15P42566 896 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 CACNB3P54284 484 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 HAND2P61296 217 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 NBPF9Q3BBW0 867 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 TBC1D10BQ4KMP7 808 aaPredicted RBP15.84■□□□□ 0.13
PRDM2-213ENST00000503842 FKBP1CQ5VVH2 108 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 TRPM4Q8TD43 1214 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 OSBPL5Q9H0X9 879 aaPredicted RBP15.84■□□□□ 0.13
PRDM2-213ENST00000503842 MCM9Q9NXL9 1143 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 ANAPC4Q9UJX5 808 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 MYH1P12882 1939 aa15.84■□□□□ 0.13
PRDM2-213ENST00000503842 LAMB1P07942 1786 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 CLRN2A0PK11 232 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 ZNF213O14771 459 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 CYP2D6P10635 497 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 LMOD1P29536 600 aaPredicted RBP15.83■□□□□ 0.12
PRDM2-213ENST00000503842 PPARAQ07869 468 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 PICALMQ13492 652 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 RBM26Q5T8P6 1007 aaKnown RBP15.83■□□□□ 0.12
PRDM2-213ENST00000503842 C12orf60Q5U649 245 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 STOX1Q6ZVD7 989 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 TBC1D10CQ8IV04 446 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 TMOD2Q9NZR1 351 aa15.83■□□□□ 0.12
PRDM2-213ENST00000503842 COL2A1P02458 1487 aaPredicted RBP15.83■□□□□ 0.12
PRDM2-213ENST00000503842 CYP2D7A0A087X1C5 515 aa15.82■□□□□ 0.12
PRDM2-213ENST00000503842 SMIM22K7EJ46 135 aa15.82■□□□□ 0.12
PRDM2-213ENST00000503842 MYO1BO43795 1136 aa15.82■□□□□ 0.12
PRDM2-213ENST00000503842 ENTPD3O75355 529 aa15.82■□□□□ 0.12
PRDM2-213ENST00000503842 KRT32Q14532 448 aa15.82■□□□□ 0.12
PRDM2-213ENST00000503842 ADCK5Q3MIX3 580 aa15.82■□□□□ 0.12
PRDM2-213ENST00000503842 TM6SF1Q9BZW5 370 aa15.82■□□□□ 0.12
PRDM2-213ENST00000503842 ADARB2Q9NS39 739 aaKnown RBP15.82■□□□□ 0.12
PRDM2-213ENST00000503842 SAP30BPQ9UHR5 308 aaKnown RBP15.82■□□□□ 0.12
PRDM2-213ENST00000503842 ROBO3Q96MS0 1386 aa15.82■□□□□ 0.12
PRDM2-213ENST00000503842 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
PRDM2-213ENST00000503842 UTRNP46939 3433 aa15.81■□□□□ 0.12
PRDM2-213ENST00000503842 MINDY4BA8MYZ0 360 aa15.81■□□□□ 0.12
PRDM2-213ENST00000503842 E7EWF7 191 aa15.81■□□□□ 0.12
PRDM2-213ENST00000503842 HIRAP54198 1017 aaPredicted RBP15.81■□□□□ 0.12
PRDM2-213ENST00000503842 CNTNAP1P78357 1384 aa15.81■□□□□ 0.12
PRDM2-213ENST00000503842 CTDSPL2Q05D32 466 aa15.81■□□□□ 0.12
PRDM2-213ENST00000503842 ZFPM1Q8IX07 1006 aa15.81■□□□□ 0.12
PRDM2-213ENST00000503842 STAG1Q8WVM7 1258 aa15.81■□□□□ 0.12
PRDM2-213ENST00000503842 RBM19Q9Y4C8 960 aaKnown RBP15.81■□□□□ 0.12
PRDM2-213ENST00000503842 TACC3Q9Y6A5 838 aa15.81■□□□□ 0.12
PRDM2-213ENST00000503842 SCN4AP35499 1836 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 ATRNL1Q5VV63 1379 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 ASTN2O75129 1339 aaPredicted RBP15.8■□□□□ 0.12
PRDM2-213ENST00000503842 POLR3DP05423 398 aaPredicted RBP15.8■□□□□ 0.12
PRDM2-213ENST00000503842 FGRP09769 529 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 PLCD1P51178 756 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 TCP10Q12799 353 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 RABEP1Q15276 862 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 AKNAD1Q5T1N1 836 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 SH3BP5LQ7L8J4 393 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 FAM83AQ86UY5 434 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 AMOTL1Q8IY63 956 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 JAKMIP1Q96N16 626 aaKnown RBP15.8■□□□□ 0.12
PRDM2-213ENST00000503842 VEZTQ9HBM0 779 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 HACL1Q9UJ83 578 aa15.8■□□□□ 0.12
PRDM2-213ENST00000503842 POTECB2RU33 542 aa15.79■□□□□ 0.12
PRDM2-213ENST00000503842 TCP10L2B9ZVM9 353 aa15.79■□□□□ 0.12
PRDM2-213ENST00000503842 PCP11498 1178 aaKnown RBP15.79■□□□□ 0.12
PRDM2-213ENST00000503842 PSMA5P28066 241 aa15.79■□□□□ 0.12
PRDM2-213ENST00000503842 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
PRDM2-213ENST00000503842 TTC6Q86TZ1 520 aa15.79■□□□□ 0.12
PRDM2-213ENST00000503842 FAM151AQ8WW52 585 aa15.79■□□□□ 0.12
PRDM2-213ENST00000503842 DHX36Q9H2U1 1008 aaKnown RBP15.79■□□□□ 0.12
PRDM2-213ENST00000503842 ZSWIM6Q9HCJ5 1215 aa15.79■□□□□ 0.12
PRDM2-213ENST00000503842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.79■□□□□ 0.12
PRDM2-213ENST00000503842 SIPA1L1O43166 1804 aa15.78■□□□□ 0.12
PRDM2-213ENST00000503842 NEDD4P46934 1319 aa15.78■□□□□ 0.12
PRDM2-213ENST00000503842 IQCA1LA6NCM1 817 aa15.78■□□□□ 0.12
PRDM2-213ENST00000503842 DDTLA6NHG4 134 aaPredicted RBP15.78■□□□□ 0.12
PRDM2-213ENST00000503842 EPHX2P34913 555 aa15.78■□□□□ 0.12
PRDM2-213ENST00000503842 GABPAQ06546 454 aa15.78■□□□□ 0.12
PRDM2-213ENST00000503842 NEK1Q96PY6 1258 aa15.78■□□□□ 0.12
PRDM2-213ENST00000503842 RNF41Q9H4P4 317 aaPredicted RBP15.78■□□□□ 0.12
PRDM2-213ENST00000503842 TAF1DQ9H5J8 278 aaPredicted RBP15.78■□□□□ 0.12
PRDM2-213ENST00000503842 PGAP2Q9UHJ9 254 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms