RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 LAMA3Q16787 3333 aa18.15■□□□□ 0.5
SEC61A1-207ENST00000498837 FOCADQ5VW36 1801 aa18.15■□□□□ 0.5
SEC61A1-207ENST00000498837 SOX1O00570 391 aaPredicted RBP18.15■□□□□ 0.5
SEC61A1-207ENST00000498837 SPP2Q13103 211 aa18.15■□□□□ 0.5
SEC61A1-207ENST00000498837 FAM110CQ1W6H9 321 aa18.15■□□□□ 0.5
SEC61A1-207ENST00000498837 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
SEC61A1-207ENST00000498837 PROCA1Q8NCQ7 364 aaPredicted RBP18.15■□□□□ 0.5
SEC61A1-207ENST00000498837 DIS3LQ8TF46 1054 aaKnown RBP18.15■□□□□ 0.5
SEC61A1-207ENST00000498837 STAP2Q9UGK3 403 aa18.15■□□□□ 0.5
SEC61A1-207ENST00000498837 RRP1BQ14684 758 aaKnown RBP18.14■□□□□ 0.49
SEC61A1-207ENST00000498837 PI16Q6UXB8 463 aa18.14■□□□□ 0.49
SEC61A1-207ENST00000498837 TBC1D9Q6ZT07 1266 aa18.14■□□□□ 0.49
SEC61A1-207ENST00000498837 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.14■□□□□ 0.49
SEC61A1-207ENST00000498837 OSBPL5Q9H0X9 879 aaPredicted RBP18.14■□□□□ 0.49
SEC61A1-207ENST00000498837 HMG20BQ9P0W2 317 aa18.14■□□□□ 0.49
SEC61A1-207ENST00000498837 PNMA3Q9UL41 463 aa18.14■□□□□ 0.49
SEC61A1-207ENST00000498837 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.49
SEC61A1-207ENST00000498837 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
SEC61A1-207ENST00000498837 CAPN2P17655 700 aa18.13■□□□□ 0.49
SEC61A1-207ENST00000498837 HMGCS2P54868 508 aa18.13■□□□□ 0.49
SEC61A1-207ENST00000498837 MVPQ14764 893 aaKnown RBP18.13■□□□□ 0.49
SEC61A1-207ENST00000498837 ZNF280CQ8ND82 737 aa18.13■□□□□ 0.49
SEC61A1-207ENST00000498837 LRCH3Q96II8 777 aa18.13■□□□□ 0.49
SEC61A1-207ENST00000498837 NEUROD6Q96NK8 337 aa18.13■□□□□ 0.49
SEC61A1-207ENST00000498837 API5Q9BZZ5 524 aaKnown RBP18.13■□□□□ 0.49
SEC61A1-207ENST00000498837 AKAP2Q9Y2D5 859 aa18.13■□□□□ 0.49
SEC61A1-207ENST00000498837 A0A1W2PPC1 479 aa18.12■□□□□ 0.49
SEC61A1-207ENST00000498837 SRGAP3O43295 1099 aa18.12■□□□□ 0.49
SEC61A1-207ENST00000498837 TRIM32Q13049 653 aa18.12■□□□□ 0.49
SEC61A1-207ENST00000498837 NSUN4Q96CB9 384 aaKnown RBP18.12■□□□□ 0.49
SEC61A1-207ENST00000498837 GJD2Q9UKL4 321 aa18.12■□□□□ 0.49
SEC61A1-207ENST00000498837 LDHCP07864 332 aa18.11■□□□□ 0.49
SEC61A1-207ENST00000498837 CAP2P40123 477 aa18.11■□□□□ 0.49
SEC61A1-207ENST00000498837 GCLCP48506 637 aaPredicted RBP18.11■□□□□ 0.49
SEC61A1-207ENST00000498837 NECAB2Q7Z6G3 386 aa18.11■□□□□ 0.49
SEC61A1-207ENST00000498837 SPATA5Q8NB90 893 aa18.11■□□□□ 0.49
SEC61A1-207ENST00000498837 ASCC2Q9H1I8 757 aaPredicted RBP18.11■□□□□ 0.49
SEC61A1-207ENST00000498837 COL2A1P02458 1487 aaPredicted RBP18.11■□□□□ 0.49
SEC61A1-207ENST00000498837 MYH1P12882 1939 aa18.11■□□□□ 0.49
SEC61A1-207ENST00000498837 USP17L5A8MUK1 530 aa18.1■□□□□ 0.49
SEC61A1-207ENST00000498837 HMGCRP04035 888 aa18.1■□□□□ 0.49
SEC61A1-207ENST00000498837 GSTO1P78417 241 aa18.1■□□□□ 0.49
SEC61A1-207ENST00000498837 SLC17A8Q8NDX2 589 aa18.1■□□□□ 0.49
SEC61A1-207ENST00000498837 RAI14Q9P0K7 980 aa18.1■□□□□ 0.49
SEC61A1-207ENST00000498837 A0A0C4DFX4 3053 aa18.1■□□□□ 0.49
SEC61A1-207ENST00000498837 RPTORQ8N122 1335 aa18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 PEX10O60683 326 aa18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 MAP4K4O95819 1239 aaPredicted RBP18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 MNX1P50219 401 aaPredicted RBP18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 PABPC4Q13310 644 aaKnown RBP eCLIP18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 MTX1Q13505 466 aa18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 SH3D19Q5HYK7 790 aa18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 GORABQ5T7V8 394 aa18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 TEX11Q8IYF3 940 aa18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 C7orf61Q8IZ16 206 aa18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 TBC1D2Q9BYX2 928 aa18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 ZMYND8Q9ULU4 1186 aaPredicted RBP18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 MAST2Q6P0Q8 1798 aa18.09■□□□□ 0.49
SEC61A1-207ENST00000498837 FRMPD3Q5JV73 1810 aa18.08■□□□□ 0.48
SEC61A1-207ENST00000498837 GNAI3P08754 354 aa18.08■□□□□ 0.48
SEC61A1-207ENST00000498837 CT47B1P0C2W7 299 aaPredicted RBP18.08■□□□□ 0.48
SEC61A1-207ENST00000498837 ARID4AP29374 1257 aaPredicted RBP18.08■□□□□ 0.48
SEC61A1-207ENST00000498837 MCAMP43121 646 aa18.08■□□□□ 0.48
SEC61A1-207ENST00000498837 ANKLE1Q8NAG6 615 aa18.08■□□□□ 0.48
SEC61A1-207ENST00000498837 SH3RF3Q8TEJ3 882 aaPredicted RBP18.08■□□□□ 0.48
SEC61A1-207ENST00000498837 GDF15Q99988 308 aa18.08■□□□□ 0.48
SEC61A1-207ENST00000498837 HMX1Q9NP08 348 aaPredicted RBP18.08■□□□□ 0.48
SEC61A1-207ENST00000498837 JAG1P78504 1218 aa18.07■□□□□ 0.48
SEC61A1-207ENST00000498837 TRIB2Q92519 343 aa18.07■□□□□ 0.48
SEC61A1-207ENST00000498837 P2RX7Q99572 595 aaKnown RBP18.07■□□□□ 0.48
SEC61A1-207ENST00000498837 AS3MTQ9HBK9 375 aa18.07■□□□□ 0.48
SEC61A1-207ENST00000498837 MORF4L1Q9UBU8 362 aa18.07■□□□□ 0.48
SEC61A1-207ENST00000498837 HERC5Q9UII4 1024 aaKnown RBP18.07■□□□□ 0.48
SEC61A1-207ENST00000498837 CUL9Q8IWT3 2517 aa18.07■□□□□ 0.48
SEC61A1-207ENST00000498837 DLL1O00548 723 aa18.06■□□□□ 0.48
SEC61A1-207ENST00000498837 CYP2B6P20813 491 aa18.06■□□□□ 0.48
SEC61A1-207ENST00000498837 BMP8BP34820 402 aa18.06■□□□□ 0.48
SEC61A1-207ENST00000498837 RARSP54136 660 aaKnown RBP18.06■□□□□ 0.48
SEC61A1-207ENST00000498837 MTMR2Q13614 643 aa18.06■□□□□ 0.48
SEC61A1-207ENST00000498837 NBPF3Q9H094 633 aa18.06■□□□□ 0.48
SEC61A1-207ENST00000498837 LRP2BPQ9P2M1 347 aa18.06■□□□□ 0.48
SEC61A1-207ENST00000498837 PNMA6EA0A0J9YXQ4 647 aa18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 SYN1P17600 705 aa18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 IRX3P78415 501 aaPredicted RBP18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 SHROOM1Q2M3G4 852 aaPredicted RBP18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 WDR18Q9BV38 432 aa18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 TXNRD2Q9NNW7 524 aa18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 SNRKQ9NRH2 765 aa18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 AATFQ9NY61 560 aaKnown RBP eCLIP18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 PI4KBQ9UBF8 816 aa18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 DNAH12Q6ZR08 3092 aa18.05■□□□□ 0.48
SEC61A1-207ENST00000498837 HOXA7P31268 230 aaPredicted RBP18.04■□□□□ 0.48
SEC61A1-207ENST00000498837 BACE1P56817 501 aa18.04■□□□□ 0.48
SEC61A1-207ENST00000498837 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
SEC61A1-207ENST00000498837 C11orf49Q9H6J7 331 aa18.04■□□□□ 0.48
SEC61A1-207ENST00000498837 DNAJC18Q9H819 358 aa18.04■□□□□ 0.48
SEC61A1-207ENST00000498837 OGDHLQ9ULD0 1010 aa18.04■□□□□ 0.48
SEC61A1-207ENST00000498837 TNNQ9UQP3 1299 aa18.04■□□□□ 0.48
SEC61A1-207ENST00000498837 ASNSP08243 561 aa18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 UQCRFS1P1P0C7P4 283 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms