RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 RAB11FIP3O75154 756 aa20.68■□□□□ 0.9
CDKN2A-209ENST00000498628 SLC9C1Q4G0N8 1177 aa20.68■□□□□ 0.9
CDKN2A-209ENST00000498628 CRACR2BQ8N4Y2 399 aaPredicted RBP20.68■□□□□ 0.9
CDKN2A-209ENST00000498628 TGFBRAP1Q8WUH2 860 aa20.68■□□□□ 0.9
CDKN2A-209ENST00000498628 ARMC5Q96C12 935 aa20.68■□□□□ 0.9
CDKN2A-209ENST00000498628 AS3MTQ9HBK9 375 aa20.68■□□□□ 0.9
CDKN2A-209ENST00000498628 TRIM75PA6NK02 468 aa20.67■□□□□ 0.9
CDKN2A-209ENST00000498628 HLA-DOAP06340 250 aa20.67■□□□□ 0.9
CDKN2A-209ENST00000498628 IFIT2P09913 472 aaKnown RBP20.67■□□□□ 0.9
CDKN2A-209ENST00000498628 MOGSQ13724 837 aa20.67■□□□□ 0.9
CDKN2A-209ENST00000498628 GPAT2Q6NUI2 795 aa20.67■□□□□ 0.9
CDKN2A-209ENST00000498628 MAPKAPK5Q8IW41 473 aa20.67■□□□□ 0.9
CDKN2A-209ENST00000498628 IL1RAPL2Q9NP60 686 aa20.67■□□□□ 0.9
CDKN2A-209ENST00000498628 FMNL1O95466 1100 aaPredicted RBP20.66■□□□□ 0.9
CDKN2A-209ENST00000498628 CAP2P40123 477 aa20.66■□□□□ 0.9
CDKN2A-209ENST00000498628 PSMC4P43686 418 aa20.66■□□□□ 0.9
CDKN2A-209ENST00000498628 PABPC4Q13310 644 aaKnown RBP eCLIP20.66■□□□□ 0.9
CDKN2A-209ENST00000498628 PDE3AQ14432 1141 aa20.66■□□□□ 0.9
CDKN2A-209ENST00000498628 PNMA3Q9UL41 463 aa20.66■□□□□ 0.9
CDKN2A-209ENST00000498628 PTCH2Q9Y6C5 1203 aa20.66■□□□□ 0.9
CDKN2A-209ENST00000498628 FLT1P17948 1338 aa20.65■□□□□ 0.9
CDKN2A-209ENST00000498628 FAM196BA6NMK8 535 aa20.65■□□□□ 0.9
CDKN2A-209ENST00000498628 USP17L5A8MUK1 530 aa20.65■□□□□ 0.9
CDKN2A-209ENST00000498628 APBB1O00213 710 aa20.65■□□□□ 0.9
CDKN2A-209ENST00000498628 USP5P45974 858 aa20.65■□□□□ 0.9
CDKN2A-209ENST00000498628 MAGEB6Q8N7X4 407 aa20.65■□□□□ 0.9
CDKN2A-209ENST00000498628 ZNF280CQ8ND82 737 aa20.65■□□□□ 0.9
CDKN2A-209ENST00000498628 GINM1Q9NU53 330 aa20.65■□□□□ 0.9
CDKN2A-209ENST00000498628 MAST2Q6P0Q8 1798 aa20.64■□□□□ 0.9
CDKN2A-209ENST00000498628 SLURP2P0DP57 97 aa20.64■□□□□ 0.89
CDKN2A-209ENST00000498628 ADGRA1Q86SQ6 560 aa20.64■□□□□ 0.89
CDKN2A-209ENST00000498628 PROCA1Q8NCQ7 364 aaPredicted RBP20.64■□□□□ 0.89
CDKN2A-209ENST00000498628 SMCR8Q8TEV9 937 aaPredicted RBP20.64■□□□□ 0.89
CDKN2A-209ENST00000498628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.64■□□□□ 0.89
CDKN2A-209ENST00000498628 ARHGAP39Q9C0H5 1083 aa20.64■□□□□ 0.89
CDKN2A-209ENST00000498628 AGTPBP1Q9UPW5 1226 aa20.64■□□□□ 0.89
CDKN2A-209ENST00000498628 ASNSP08243 561 aa20.63■□□□□ 0.89
CDKN2A-209ENST00000498628 CYP2C8P10632 490 aa20.63■□□□□ 0.89
CDKN2A-209ENST00000498628 FCGRTP55899 365 aa20.63■□□□□ 0.89
CDKN2A-209ENST00000498628 CAP1Q01518 475 aa20.63■□□□□ 0.89
CDKN2A-209ENST00000498628 SPP2Q13103 211 aa20.63■□□□□ 0.89
CDKN2A-209ENST00000498628 SRRDQ9UH36 339 aa20.63■□□□□ 0.89
CDKN2A-209ENST00000498628 DOCK1Q14185 1865 aa20.62■□□□□ 0.89
CDKN2A-209ENST00000498628 ADGRA2Q96PE1 1338 aa20.62■□□□□ 0.89
CDKN2A-209ENST00000498628 BCRP11274 1271 aa20.62■□□□□ 0.89
CDKN2A-209ENST00000498628 OSBPP22059 807 aa20.62■□□□□ 0.89
CDKN2A-209ENST00000498628 DYNLL1P63167 89 aaKnown RBP20.62■□□□□ 0.89
CDKN2A-209ENST00000498628 SLC4A8Q2Y0W8 1093 aa20.62■□□□□ 0.89
CDKN2A-209ENST00000498628 RAET1EQ8TD07 263 aa20.62■□□□□ 0.89
CDKN2A-209ENST00000498628 ZNF333Q96JL9 665 aa20.62■□□□□ 0.89
CDKN2A-209ENST00000498628 TTC6Q86TZ1 520 aa20.61■□□□□ 0.89
CDKN2A-209ENST00000498628 METTL16Q86W50 562 aaKnown RBP20.61■□□□□ 0.89
CDKN2A-209ENST00000498628 MIGA1Q8NAN2 632 aa20.61■□□□□ 0.89
CDKN2A-209ENST00000498628 BCL11AQ9H165 835 aa20.61■□□□□ 0.89
CDKN2A-209ENST00000498628 ANTXR1Q9H6X2 564 aa20.61■□□□□ 0.89
CDKN2A-209ENST00000498628 PALD1Q9ULE6 856 aa20.61■□□□□ 0.89
CDKN2A-209ENST00000498628 ECM2O94769 699 aaPredicted RBP20.6■□□□□ 0.89
CDKN2A-209ENST00000498628 CCDC84Q86UT8 332 aaPredicted RBP20.6■□□□□ 0.89
CDKN2A-209ENST00000498628 SIRT2Q8IXJ6 389 aa20.6■□□□□ 0.89
CDKN2A-209ENST00000498628 TRIM47Q96LD4 638 aa20.6■□□□□ 0.89
CDKN2A-209ENST00000498628 WDR18Q9BV38 432 aa20.6■□□□□ 0.89
CDKN2A-209ENST00000498628 TMOD4Q9NZQ9 345 aa20.6■□□□□ 0.89
CDKN2A-209ENST00000498628 SAP30BPQ9UHR5 308 aaKnown RBP20.6■□□□□ 0.89
CDKN2A-209ENST00000498628 NDUFB9Q9Y6M9 179 aa20.6■□□□□ 0.89
CDKN2A-209ENST00000498628 MYPNQ86TC9 1320 aa20.59■□□□□ 0.89
CDKN2A-209ENST00000498628 MAGEB6P1A0A0J9YX57 407 aa20.59■□□□□ 0.89
CDKN2A-209ENST00000498628 SLC9C2Q5TAH2 1124 aa20.59■□□□□ 0.89
CDKN2A-209ENST00000498628 DNAJC2Q99543 621 aaKnown RBP20.59■□□□□ 0.89
CDKN2A-209ENST00000498628 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.59■□□□□ 0.89
CDKN2A-209ENST00000498628 POTEFA5A3E0 1075 aa20.58■□□□□ 0.89
CDKN2A-209ENST00000498628 C19orf81C9J6K1 198 aa20.58■□□□□ 0.89
CDKN2A-209ENST00000498628 GCLCP48506 637 aaPredicted RBP20.58■□□□□ 0.89
CDKN2A-209ENST00000498628 HMGCS2P54868 508 aa20.58■□□□□ 0.89
CDKN2A-209ENST00000498628 SH3D19Q5HYK7 790 aa20.58■□□□□ 0.89
CDKN2A-209ENST00000498628 GOLIM4O00461 696 aa20.57■□□□□ 0.88
CDKN2A-209ENST00000498628 GRK4P32298 578 aa20.57■□□□□ 0.88
CDKN2A-209ENST00000498628 BACE1P56817 501 aa20.57■□□□□ 0.88
CDKN2A-209ENST00000498628 SH3TC2Q8TF17 1288 aa20.57■□□□□ 0.88
CDKN2A-209ENST00000498628 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
CDKN2A-209ENST00000498628 LRRCC1Q9C099 1032 aa20.57■□□□□ 0.88
CDKN2A-209ENST00000498628 SERPINB13Q9UIV8 391 aa20.57■□□□□ 0.88
CDKN2A-209ENST00000498628 USP17L10C9JJH3 530 aa20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 PDE6AP16499 860 aa20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 UBXN2AP68543 259 aa20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 RRP1BQ14684 758 aaKnown RBP20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 TREML2Q5T2D2 321 aa20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 PRPF38BQ5VTL8 546 aaKnown RBP20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 COA7Q96BR5 231 aa20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 EHD4Q9H223 541 aa20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 BIN2Q9UBW5 565 aaPredicted RBP20.56■□□□□ 0.88
CDKN2A-209ENST00000498628 TNPO2O14787 897 aaKnown RBP20.55■□□□□ 0.88
CDKN2A-209ENST00000498628 GDF11O95390 407 aa20.55■□□□□ 0.88
CDKN2A-209ENST00000498628 POLR3DP05423 398 aaPredicted RBP20.55■□□□□ 0.88
CDKN2A-209ENST00000498628 ATP5JP18859 108 aa20.55■□□□□ 0.88
CDKN2A-209ENST00000498628 EN2P19622 333 aaPredicted RBP20.55■□□□□ 0.88
CDKN2A-209ENST00000498628 CTGFP29279 349 aa20.55■□□□□ 0.88
CDKN2A-209ENST00000498628 FAM110CQ1W6H9 321 aa20.55■□□□□ 0.88
CDKN2A-209ENST00000498628 ANKRD13CQ8N6S4 541 aa20.55■□□□□ 0.88
CDKN2A-209ENST00000498628 SLAIN1Q8ND83 568 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms