RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 MMP1P03956 469 aa14.96□□□□□ -0.01
PTPN7-217ENST00000495688 UQCRFS1P1P0C7P4 283 aa14.96□□□□□ -0.01
PTPN7-217ENST00000495688 TOP1P11387 765 aaKnown RBP14.96□□□□□ -0.01
PTPN7-217ENST00000495688 AKNAD1Q5T1N1 836 aa14.96□□□□□ -0.01
PTPN7-217ENST00000495688 TRIM65Q6PJ69 517 aa14.96□□□□□ -0.01
PTPN7-217ENST00000495688 MFSD6Q6ZSS7 791 aa14.96□□□□□ -0.01
PTPN7-217ENST00000495688 OXER1Q8TDS5 423 aa14.96□□□□□ -0.01
PTPN7-217ENST00000495688 IFNAR1P17181 557 aa14.96□□□□□ -0.02
PTPN7-217ENST00000495688 KCNJ6P48051 423 aa14.96□□□□□ -0.02
PTPN7-217ENST00000495688 DZIP3Q86Y13 1208 aaKnown RBP14.96□□□□□ -0.02
PTPN7-217ENST00000495688 TMX1Q9H3N1 280 aa14.96□□□□□ -0.02
PTPN7-217ENST00000495688 SLAIN2Q9P270 581 aa14.96□□□□□ -0.02
PTPN7-217ENST00000495688 IQSEC3Q9UPP2 1182 aaPredicted RBP14.96□□□□□ -0.02
PTPN7-217ENST00000495688 NRDCO43847 1150 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 TDO2P48775 406 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 BCAMP50895 628 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 MAP3K12Q12852 859 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 ALX1Q15699 326 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 NUP133Q8WUM0 1156 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 SERTAD1Q9UHV2 236 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 MAN1B1Q9UKM7 699 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.95□□□□□ -0.022e-6■■■■□ 20
PTPN7-217ENST00000495688 SLIT2O94813 1529 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 TMEM139Q8IV31 216 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 REXO1L1PQ8IX06 675 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 FBXO2Q9UK22 296 aaPredicted RBP14.95□□□□□ -0.02
PTPN7-217ENST00000495688 SLC4A4Q9Y6R1 1079 aa14.95□□□□□ -0.02
PTPN7-217ENST00000495688 XIRP1Q702N8 1843 aaKnown RBP14.94□□□□□ -0.02
PTPN7-217ENST00000495688 POSTNQ15063 836 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 RTN1Q16799 776 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 MED15Q96RN5 788 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 NFE2L3Q9Y4A8 694 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 CHD4Q14839 1912 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 NUP98P52948 1817 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 ITGB4P16144 1822 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 hCG_1642624A0A1W2PR95 340 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 FAM205CA6NFA0 338 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 CBFA2T2O43439 604 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 RGS22Q8NE09 1264 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 BTG4Q9NY30 223 aa14.94□□□□□ -0.02
PTPN7-217ENST00000495688 STK36Q9NRP7 1315 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 PTPREP23469 700 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 ADKP55263 362 aaKnown RBP14.93□□□□□ -0.02
PTPN7-217ENST00000495688 WTAPQ15007 396 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 SHISA4Q96DD7 197 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 LRP6O75581 1613 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 MROH5Q6ZUA9 1318 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 URI1O94763 535 aaPredicted RBP14.93□□□□□ -0.02
PTPN7-217ENST00000495688 SLC5A1P13866 664 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 SAFBQ15424 915 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTPN7-217ENST00000495688 ARHGAP29Q52LW3 1261 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 SUSD4Q5VX71 490 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 KRT222Q8N1A0 295 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 CRACR2BQ8N4Y2 399 aaPredicted RBP14.93□□□□□ -0.02
PTPN7-217ENST00000495688 SDR42E1Q8WUS8 393 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 CABP5Q9NP86 173 aa14.93□□□□□ -0.02
PTPN7-217ENST00000495688 SAMSN1Q9NSI8 373 aaKnown RBP14.93□□□□□ -0.02
PTPN7-217ENST00000495688 WTIPA6NIX2 430 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-217ENST00000495688 H2AFXP16104 143 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-217ENST00000495688 ZNF771Q7L3S4 317 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-217ENST00000495688 ADGRA1Q86SQ6 560 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 TRIM22Q8IYM9 498 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 MPHOSPH8Q99549 860 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 KRT23Q9C075 422 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 CNNM2Q9H8M5 875 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 VWA3AA6NCI4 1184 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 SLFN14P0C7P3 912 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 CASP1P29466 404 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 CLCN6P51797 869 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 ZNF34Q8IZ26 560 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 EPC1Q9H2F5 836 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 PPP2R2CQ9Y2T4 447 aa14.92□□□□□ -0.02
PTPN7-217ENST00000495688 MINDY4BA8MYZ0 360 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 CDK11BP21127 795 aaKnown RBP14.91□□□□□ -0.02
PTPN7-217ENST00000495688 EARS2Q5JPH6 523 aaKnown RBP14.91□□□□□ -0.02
PTPN7-217ENST00000495688 TOGARAM2Q6ZUX3 1019 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 STAG1Q8WVM7 1258 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 CSRNP2Q9H175 543 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 FAM53CQ9NYF3 392 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 ANKRD36CQ5JPF3 1778 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 A0A0G2JS52 829 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 BCL9O00512 1426 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 RILPL1Q5EBL4 403 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 ZNF654Q8IZM8 581 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 TC2NQ8N9U0 490 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 FANCBQ8NB91 859 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 WDR24Q96S15 920 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 CARD6Q9BX69 1037 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 PHLPP2Q6ZVD8 1323 aa14.91□□□□□ -0.02
PTPN7-217ENST00000495688 A0A087X0B3 334 aa14.9□□□□□ -0.02
PTPN7-217ENST00000495688 PRDM1O75626 825 aa14.9□□□□□ -0.02
PTPN7-217ENST00000495688 ZNF18P17022 549 aa14.9□□□□□ -0.02
PTPN7-217ENST00000495688 SARSP49591 514 aaKnown RBP14.9□□□□□ -0.02
PTPN7-217ENST00000495688 TBX2Q13207 712 aaPredicted RBP14.9□□□□□ -0.02
PTPN7-217ENST00000495688 WASF1Q92558 559 aa14.9□□□□□ -0.02
PTPN7-217ENST00000495688 SMARCE1Q969G3 411 aa14.9□□□□□ -0.02
PTPN7-217ENST00000495688 BAG1Q99933 345 aaPredicted RBP14.9□□□□□ -0.02
PTPN7-217ENST00000495688 FOXP1Q9H334 677 aaPredicted RBP14.9□□□□□ -0.02
PTPN7-217ENST00000495688 LRP2BPQ9P2M1 347 aa14.9□□□□□ -0.02
PTPN7-217ENST00000495688 PARP3Q9Y6F1 533 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms