RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 RAI14Q9P0K7 980 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 TRPC5Q9UL62 973 aaPredicted RBP17.12■□□□□ 0.33
CHTOP-206ENST00000495554 EP400Q96L91 3159 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 NID2Q14112 1375 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
CHTOP-206ENST00000495554 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.333e-20■■■■□ 24.3
CHTOP-206ENST00000495554 CDC25BP30305 580 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
CHTOP-206ENST00000495554 NFIXQ14938 502 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 AXDND1Q5T1B0 1012 aaPredicted RBP17.12■□□□□ 0.33
CHTOP-206ENST00000495554 TMTC2Q8N394 836 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 WASF1Q92558 559 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 CACNA1SQ13698 1873 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 PTGS1P23219 599 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 JMYQ8N9B5 988 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 TOMM22Q9NS69 142 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 ERICH2A1L162 156 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-206ENST00000495554 IFNAR1P17181 557 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 RRP12Q5JTH9 1297 aaKnown RBP17.11■□□□□ 0.33
CHTOP-206ENST00000495554 CCDC186Q7Z3E2 898 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 TXNRD3Q86VQ6 643 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 SDR42E1Q8WUS8 393 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 KIAA1468Q9P260 1216 aa17.11■□□□□ 0.33
CHTOP-206ENST00000495554 PPP6R2O75170 966 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 WTAPQ15007 396 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 SLC51AQ86UW1 340 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 C17orf53Q8N3J3 647 aaPredicted RBP17.1■□□□□ 0.33
CHTOP-206ENST00000495554 TFCP2L1Q9NZI6 479 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 KCNG1Q9UIX4 513 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 PYCARDQ9ULZ3 195 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 IRS2Q9Y4H2 1338 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 UQCRHLA0A096LP55 91 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 MAGEB6P1A0A0J9YX57 407 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 ZNF202O95125 648 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 UQCRHP07919 91 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 RCAN1P53805 252 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 PPARAQ07869 468 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
CHTOP-206ENST00000495554 MRFAP1L1Q96HT8 127 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 SLC26A6Q9BXS9 759 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 CLIP2Q9UDT6 1046 aa17.1■□□□□ 0.33
CHTOP-206ENST00000495554 CCDC196A0A1B0GTZ2 297 aa17.09■□□□□ 0.33
CHTOP-206ENST00000495554 DYNLL1P63167 89 aaKnown RBP17.09■□□□□ 0.33
CHTOP-206ENST00000495554 DHX40Q8IX18 779 aaKnown RBP17.09■□□□□ 0.33
CHTOP-206ENST00000495554 ANAPC4Q9UJX5 808 aa17.09■□□□□ 0.33
CHTOP-206ENST00000495554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.09■□□□□ 0.33
CHTOP-206ENST00000495554 SEMA3EO15041 775 aa17.09■□□□□ 0.33
CHTOP-206ENST00000495554 HIBADHP31937 336 aaKnown RBP17.09■□□□□ 0.33
CHTOP-206ENST00000495554 TRIM22Q8IYM9 498 aa17.09■□□□□ 0.33
CHTOP-206ENST00000495554 PRIMPOLQ96LW4 560 aa17.09■□□□□ 0.33
CHTOP-206ENST00000495554 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
CHTOP-206ENST00000495554 CHD4Q14839 1912 aa17.08■□□□□ 0.33
CHTOP-206ENST00000495554 WDHD1O75717 1129 aaPredicted RBP17.08■□□□□ 0.33
CHTOP-206ENST00000495554 PFKFB1P16118 471 aa17.08■□□□□ 0.33
CHTOP-206ENST00000495554 MARCKSP29966 332 aaPredicted RBP17.08■□□□□ 0.33
CHTOP-206ENST00000495554 RTN1Q16799 776 aa17.08■□□□□ 0.33
CHTOP-206ENST00000495554 ERCC4Q92889 916 aaPredicted RBP17.08■□□□□ 0.33
CHTOP-206ENST00000495554 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.33
CHTOP-206ENST00000495554 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.33
CHTOP-206ENST00000495554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
CHTOP-206ENST00000495554 SLC3A2P08195 630 aaKnown RBP17.08■□□□□ 0.32
CHTOP-206ENST00000495554 PTPAQ15257 358 aa17.08■□□□□ 0.32
CHTOP-206ENST00000495554 NSUN4Q96CB9 384 aaKnown RBP17.08■□□□□ 0.32
CHTOP-206ENST00000495554 TIGD1Q96MW7 591 aa17.08■□□□□ 0.32
CHTOP-206ENST00000495554 MAP3K14Q99558 947 aa17.08■□□□□ 0.32
CHTOP-206ENST00000495554 ZKSCAN3Q9BRR0 538 aa17.08■□□□□ 0.32
CHTOP-206ENST00000495554 UBAC1Q9BSL1 405 aa17.08■□□□□ 0.32
CHTOP-206ENST00000495554 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.08■□□□□ 0.32
CHTOP-206ENST00000495554 NRBP1Q9UHY1 535 aa17.08■□□□□ 0.32
CHTOP-206ENST00000495554 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
CHTOP-206ENST00000495554 STK11IPQ8N1F8 1099 aa17.07■□□□□ 0.32
CHTOP-206ENST00000495554 ESR2Q92731 530 aa17.07■□□□□ 0.32
CHTOP-206ENST00000495554 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.325e-7■■□□□ 12
CHTOP-206ENST00000495554 BPIFA3Q9BQP9 254 aa17.07■□□□□ 0.32
CHTOP-206ENST00000495554 PDS5AQ29RF7 1337 aaKnown RBP17.07■□□□□ 0.32
CHTOP-206ENST00000495554 A0A087WWV3 80 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 MINDY4BA8MYZ0 360 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 DYNC1I1O14576 645 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 ADRA2BP18089 450 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 SYKP43405 635 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 MECOMQ03112 1051 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 PPP2R5BQ15173 497 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 NOSTRINQ8IVI9 506 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 AOPEPQ8N6M6 819 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 FANCBQ8NB91 859 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 HPSEQ9Y251 543 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 MROH7-TTC4A0A0A0MT08 1334 aa17.06■□□□□ 0.32
CHTOP-206ENST00000495554 FAM237AA0A1B0GTK4 181 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 DEXIO95424 95 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 MMP1P03956 469 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 GYS1P13807 737 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 PRR5LQ6MZQ0 368 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 ZNF654Q8IZM8 581 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 CRACR2BQ8N4Y2 399 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-206ENST00000495554 BRIP1Q9BX63 1249 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 UBE2Q2LH0YL09 131 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 ZBTB22O15209 634 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms