RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 PHF20L1A8MW92 1017 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 GPAA1O43292 621 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 GSPT1P15170 499 aaKnown RBP16.34■□□□□ 0.21
FDPS-219ENST00000495308 GJA5P36382 358 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
FDPS-219ENST00000495308 MAP3K10Q02779 954 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 EVX2Q03828 476 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 ZMYM1Q5SVZ6 1142 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 TTC22Q5TAA0 569 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 OPTNQ96CV9 577 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 WNK4Q96J92 1243 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 STRBPQ96SI9 672 aaKnown RBP16.34■□□□□ 0.21
FDPS-219ENST00000495308 DNAJC18Q9H819 358 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
FDPS-219ENST00000495308 MCM9Q9NXL9 1143 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 ZNF112Q9UJU3 913 aa16.34■□□□□ 0.21
FDPS-219ENST00000495308 PTPRFP10586 1907 aa16.33■□□□□ 0.21
FDPS-219ENST00000495308 HLA-DOAP06340 250 aa16.33■□□□□ 0.2
FDPS-219ENST00000495308 CYP2D6P10635 497 aa16.33■□□□□ 0.2
FDPS-219ENST00000495308 MAP2K2P36507 400 aa16.33■□□□□ 0.2
FDPS-219ENST00000495308 SPRYD7Q5W111 196 aa16.33■□□□□ 0.2
FDPS-219ENST00000495308 CCDC129Q6ZRS4 1044 aa16.33■□□□□ 0.2
FDPS-219ENST00000495308 FAM227BQ96M60 508 aa16.33■□□□□ 0.2
FDPS-219ENST00000495308 PI4KBQ9UBF8 816 aa16.33■□□□□ 0.2
FDPS-219ENST00000495308 A0A0D9SFI3 127 aa16.32■□□□□ 0.2
FDPS-219ENST00000495308 TBC1D12O60347 775 aa16.32■□□□□ 0.2
FDPS-219ENST00000495308 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
FDPS-219ENST00000495308 PLCD1P51178 756 aa16.32■□□□□ 0.2
FDPS-219ENST00000495308 CRACR2BQ8N4Y2 399 aaPredicted RBP16.32■□□□□ 0.2
FDPS-219ENST00000495308 OTUD5Q96G74 571 aa16.32■□□□□ 0.2
FDPS-219ENST00000495308 TRIM34Q9BYJ4 488 aa16.32■□□□□ 0.2
FDPS-219ENST00000495308 ATP8A2Q9NTI2 1148 aa16.32■□□□□ 0.2
FDPS-219ENST00000495308 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.32■□□□□ 0.2
FDPS-219ENST00000495308 HERC5Q9UII4 1024 aaKnown RBP16.32■□□□□ 0.2
FDPS-219ENST00000495308 CYP2D7A0A087X1C5 515 aa16.31■□□□□ 0.2
FDPS-219ENST00000495308 NMIQ13287 307 aaPredicted RBP16.31■□□□□ 0.2
FDPS-219ENST00000495308 RRP1BQ14684 758 aaKnown RBP16.31■□□□□ 0.2
FDPS-219ENST00000495308 NOL9Q5SY16 702 aaKnown RBP16.31■□□□□ 0.2
FDPS-219ENST00000495308 SPDYE5A6NIY4 337 aa16.3■□□□□ 0.2
FDPS-219ENST00000495308 GSG1L2A8MUP6 293 aa16.3■□□□□ 0.2
FDPS-219ENST00000495308 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
FDPS-219ENST00000495308 HSPA1AP0DMV8 641 aaKnown RBP16.3■□□□□ 0.2
FDPS-219ENST00000495308 HSPA1BP0DMV9 641 aaKnown RBP16.3■□□□□ 0.2
FDPS-219ENST00000495308 ZBTB48P10074 688 aaPredicted RBP16.3■□□□□ 0.2
FDPS-219ENST00000495308 SDSP20132 328 aa16.3■□□□□ 0.2
FDPS-219ENST00000495308 TTC6Q86TZ1 520 aa16.3■□□□□ 0.2
FDPS-219ENST00000495308 METTL16Q86W50 562 aaKnown RBP16.3■□□□□ 0.2
FDPS-219ENST00000495308 SCYL3Q8IZE3 742 aa16.3■□□□□ 0.2
FDPS-219ENST00000495308 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
FDPS-219ENST00000495308 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
FDPS-219ENST00000495308 SERPINB13Q9UIV8 391 aa16.3■□□□□ 0.2
FDPS-219ENST00000495308 CTNND1O60716 968 aaKnown RBP16.29■□□□□ 0.2
FDPS-219ENST00000495308 GDF11O95390 407 aa16.29■□□□□ 0.2
FDPS-219ENST00000495308 MAP2K1Q02750 393 aaPredicted RBP16.29■□□□□ 0.2
FDPS-219ENST00000495308 SHROOM1Q2M3G4 852 aaPredicted RBP16.29■□□□□ 0.2
FDPS-219ENST00000495308 ERICH6BQ5W0A0 696 aa16.29■□□□□ 0.2
FDPS-219ENST00000495308 CCDC84Q86UT8 332 aaPredicted RBP16.29■□□□□ 0.2
FDPS-219ENST00000495308 ERO1BQ86YB8 467 aa16.29■□□□□ 0.2
FDPS-219ENST00000495308 FOXP4Q8IVH2 680 aaPredicted RBP16.29■□□□□ 0.2
FDPS-219ENST00000495308 DDRGK1Q96HY6 314 aa16.29■□□□□ 0.2
FDPS-219ENST00000495308 EHD4Q9H223 541 aa16.29■□□□□ 0.2
FDPS-219ENST00000495308 HELLSQ9NRZ9 838 aa16.29■□□□□ 0.2
FDPS-219ENST00000495308 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
FDPS-219ENST00000495308 USP17L21D6R901 530 aa16.28■□□□□ 0.2
FDPS-219ENST00000495308 APPP05067 770 aa16.28■□□□□ 0.2
FDPS-219ENST00000495308 GNAT2P19087 354 aa16.28■□□□□ 0.2
FDPS-219ENST00000495308 JAG1P78504 1218 aa16.28■□□□□ 0.2
FDPS-219ENST00000495308 CTR9Q6PD62 1173 aa16.28■□□□□ 0.2
FDPS-219ENST00000495308 ZNF589Q86UQ0 364 aaPredicted RBP16.28■□□□□ 0.2
FDPS-219ENST00000495308 PICK1Q9NRD5 415 aa16.28■□□□□ 0.2
FDPS-219ENST00000495308 WBP1LQ9NX94 342 aa16.28■□□□□ 0.2
FDPS-219ENST00000495308 LAMA4Q16363 1823 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
FDPS-219ENST00000495308 IRF6O14896 467 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 FOXP2O15409 715 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 PTPRAP18433 802 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 SHMT1P34896 483 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 CAP2P40123 477 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 TDO2P48775 406 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 PPATQ06203 517 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 PPIL2Q13356 520 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 MCMDC2Q4G0Z9 681 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 VPS53Q5VIR6 699 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.2
FDPS-219ENST00000495308 TICAM2Q86XR7 235 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 AMOTL1Q8IY63 956 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 SLC44A5Q8NCS7 719 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 DYNLL2Q96FJ2 89 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.2
FDPS-219ENST00000495308 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
FDPS-219ENST00000495308 MANSC4A6NHS7 340 aaPredicted RBP16.26■□□□□ 0.19
FDPS-219ENST00000495308 FOXN1O15353 648 aa16.26■□□□□ 0.19
FDPS-219ENST00000495308 GABPAQ06546 454 aa16.26■□□□□ 0.19
FDPS-219ENST00000495308 SREBF2Q12772 1141 aa16.26■□□□□ 0.19
FDPS-219ENST00000495308 TATDN1Q6P1N9 297 aa16.26■□□□□ 0.19
FDPS-219ENST00000495308 GIMAP6Q6P9H5 292 aa16.26■□□□□ 0.19
FDPS-219ENST00000495308 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
FDPS-219ENST00000495308 TSKSQ9UJT2 592 aa16.26■□□□□ 0.19
FDPS-219ENST00000495308 LOC285556D6RIA3 1793 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms