RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PAK1Q13153 545 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 NAP1L3Q99457 506 aaPredicted RBP21.42■■□□□ 1.02
COL27A1-207ENST00000494090 LZTS2Q9BRK4 669 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 NUP58Q9BVL2 599 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 LMTK3Q96Q04 1460 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 ARHGAP6O43182 974 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 MSL1Q68DK7 614 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 SMC6Q96SB8 1091 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 SELENOSQ9BQE4 189 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 CALCOCO2Q13137 446 aa21.41■■□□□ 1.02
COL27A1-207ENST00000494090 PODXL2Q9NZ53 605 aa21.41■■□□□ 1.02
COL27A1-207ENST00000494090 MXRA7P84157 204 aa21.41■■□□□ 1.02
COL27A1-207ENST00000494090 ADGBQ8N7X0 1667 aa21.41■■□□□ 1.02
COL27A1-207ENST00000494090 JAK2O60674 1132 aa21.41■■□□□ 1.02
COL27A1-207ENST00000494090 GTF3C6Q969F1 213 aa21.41■■□□□ 1.02
COL27A1-207ENST00000494090 ME3Q16798 604 aa21.41■■□□□ 1.02
COL27A1-207ENST00000494090 SEL1L2Q5TEA6 688 aa21.41■■□□□ 1.02
COL27A1-207ENST00000494090 ZBTB21Q9ULJ3 1066 aa21.41■■□□□ 1.02
COL27A1-207ENST00000494090 E7EWF7 191 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 STX10O60499 249 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 SNX16P57768 344 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 RAPGEF1Q13905 1077 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 TMTC1Q8IUR5 882 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 PLEKHG3A1L390 1219 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 SAMD9Q5K651 1589 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 U2AF2P26368 475 aaKnown RBP eCLIP21.4■■□□□ 1.021e-8■■□□□ 12.9
COL27A1-207ENST00000494090 CSGALNACT2Q8N6G5 542 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 IPO4Q8TEX9 1081 aaKnown RBP21.4■■□□□ 1.02
COL27A1-207ENST00000494090 IFT74Q96LB3 600 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 POSTNQ15063 836 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 DCAF17Q5H9S7 520 aaPredicted RBP21.4■■□□□ 1.02
COL27A1-207ENST00000494090 DPH6Q7L8W6 267 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 SMAP1Q8IYB5 467 aaPredicted RBP21.4■■□□□ 1.02
COL27A1-207ENST00000494090 MICALL1Q8N3F8 863 aa21.4■■□□□ 1.02
COL27A1-207ENST00000494090 ALDH3A1P30838 453 aa21.39■■□□□ 1.02
COL27A1-207ENST00000494090 CCDC26Q8TAB7 109 aa21.39■■□□□ 1.02
COL27A1-207ENST00000494090 ZEB2O60315 1214 aa21.39■■□□□ 1.01
COL27A1-207ENST00000494090 CCDC63Q8NA47 563 aa21.39■■□□□ 1.01
COL27A1-207ENST00000494090 FAM169AQ9Y6X4 670 aa21.39■■□□□ 1.01
COL27A1-207ENST00000494090 USP44Q9H0E7 712 aa21.39■■□□□ 1.01
COL27A1-207ENST00000494090 NFE2L3Q9Y4A8 694 aa21.39■■□□□ 1.01
COL27A1-207ENST00000494090 IBTKQ9P2D0 1353 aaPredicted RBP21.39■■□□□ 1.01
COL27A1-207ENST00000494090 GAS8O95995 478 aa21.39■■□□□ 1.01
COL27A1-207ENST00000494090 CPLX4Q7Z7G2 160 aa21.39■■□□□ 1.01
COL27A1-207ENST00000494090 JAG2Q9Y219 1238 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 CALUO43852 315 aaPredicted RBP21.38■■□□□ 1.01
COL27A1-207ENST00000494090 GRM1Q13255 1194 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 TRMT2AQ8IZ69 625 aaKnown RBP21.38■■□□□ 1.01
COL27A1-207ENST00000494090 GPATCH11Q8N954 259 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 MAK16Q9BXY0 300 aaKnown RBP21.38■■□□□ 1.01
COL27A1-207ENST00000494090 ZBTB16Q05516 673 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 BIRC3Q13489 604 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 PPP1R7Q15435 360 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 CARD6Q9BX69 1037 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 MROH5Q6ZUA9 1318 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 A1BGP04217 495 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 KRT25Q7Z3Z0 450 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 C17orf53Q8N3J3 647 aaPredicted RBP21.38■■□□□ 1.01
COL27A1-207ENST00000494090 CCDC87Q9NVE4 849 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 ATP10AO60312 1499 aa21.38■■□□□ 1.01
COL27A1-207ENST00000494090 NEURL1BA8MQ27 555 aa21.37■■□□□ 1.01
COL27A1-207ENST00000494090 CCNT1O60563 726 aaKnown RBP21.37■■□□□ 1.01
COL27A1-207ENST00000494090 CCDC6Q16204 474 aa21.37■■□□□ 1.01
COL27A1-207ENST00000494090 ZNF274Q96GC6 653 aaPredicted RBP21.37■■□□□ 1.01
COL27A1-207ENST00000494090 GPCPD1Q9NPB8 672 aa21.37■■□□□ 1.01
COL27A1-207ENST00000494090 SAP30BPQ9UHR5 308 aaKnown RBP21.37■■□□□ 1.01
COL27A1-207ENST00000494090 ZAP70P43403 619 aa21.37■■□□□ 1.01
COL27A1-207ENST00000494090 PHKBQ93100 1093 aa21.37■■□□□ 1.01
COL27A1-207ENST00000494090 SPATA5Q8NB90 893 aa21.37■■□□□ 1.01
COL27A1-207ENST00000494090 CTDSPL2Q05D32 466 aa21.37■■□□□ 1.01
COL27A1-207ENST00000494090 NDUFB9Q9Y6M9 179 aa21.37■■□□□ 1.01
COL27A1-207ENST00000494090 ADALQ6DHV7 355 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 TBC1D22AQ8WUA7 517 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 KDM5DQ9BY66 1539 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 KDRP35968 1356 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 ZNF532Q9HCE3 1301 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 DNAJC21Q5F1R6 531 aaKnown RBP21.36■■□□□ 1.01
COL27A1-207ENST00000494090 KCNG1Q9UIX4 513 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 CDAN1Q8IWY9 1227 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 TLDC2A0PJX2 215 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 CETN3O15182 167 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 STRN3Q13033 797 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 NOX5Q96PH1 765 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 MYL10Q9BUA6 226 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 ZSWIM6Q9HCJ5 1215 aa21.36■■□□□ 1.01
COL27A1-207ENST00000494090 GPR161Q8N6U8 529 aaKnown RBP21.35■■□□□ 1.01
COL27A1-207ENST00000494090 EIF6P56537 245 aaKnown RBP21.35■■□□□ 1.01
COL27A1-207ENST00000494090 INF2Q27J81 1249 aa21.35■■□□□ 1.01
COL27A1-207ENST00000494090 MAPK8IP1Q9UQF2 711 aa21.35■■□□□ 1.01
COL27A1-207ENST00000494090 ABCA5Q8WWZ7 1642 aa21.35■■□□□ 1.01
COL27A1-207ENST00000494090 NONOQ15233 471 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL27A1-207ENST00000494090 ELF2Q15723 593 aa21.35■■□□□ 1.01
COL27A1-207ENST00000494090 LIN9Q5TKA1 542 aa21.35■■□□□ 1.01
COL27A1-207ENST00000494090 C8orf74Q6P047 294 aa21.35■■□□□ 1.01
COL27A1-207ENST00000494090 ZNF496Q96IT1 587 aaPredicted RBP21.35■■□□□ 1.01
COL27A1-207ENST00000494090 PRDM1O75626 825 aa21.35■■□□□ 1.01
COL27A1-207ENST00000494090 SP4Q02446 784 aa21.35■■□□□ 1.01
COL27A1-207ENST00000494090 AFAP1L1Q8TED9 768 aa21.35■■□□□ 1.01
COL27A1-207ENST00000494090 SECISBP2LQ93073 1101 aaKnown RBP21.35■■□□□ 1.01
COL27A1-207ENST00000494090 IVNS1ABPQ9Y6Y0 642 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms