RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 COG6Q9Y2V7 657 aa17.93■□□□□ 0.46
ATG4B-223ENST00000493618 PDE4DIPQ5VU43 2346 aa17.93■□□□□ 0.46
ATG4B-223ENST00000493618 APBB1O00213 710 aa17.92■□□□□ 0.46
ATG4B-223ENST00000493618 TBC1D12O60347 775 aa17.92■□□□□ 0.46
ATG4B-223ENST00000493618 BAG3O95817 575 aa17.92■□□□□ 0.46
ATG4B-223ENST00000493618 MAP4K4O95819 1239 aaPredicted RBP17.92■□□□□ 0.46
ATG4B-223ENST00000493618 DYNLL1P63167 89 aaKnown RBP17.92■□□□□ 0.46
ATG4B-223ENST00000493618 AACSQ86V21 672 aa17.92■□□□□ 0.46
ATG4B-223ENST00000493618 SH3TC2Q8TF17 1288 aa17.92■□□□□ 0.46
ATG4B-223ENST00000493618 TGFBRAP1Q8WUH2 860 aa17.92■□□□□ 0.46
ATG4B-223ENST00000493618 ZNF512BQ96KM6 892 aaPredicted RBP17.92■□□□□ 0.46
ATG4B-223ENST00000493618 PARK7Q99497 189 aaKnown RBP17.92■□□□□ 0.46
ATG4B-223ENST00000493618 IL1RAPL2Q9NP60 686 aa17.92■□□□□ 0.46
ATG4B-223ENST00000493618 EN2P19622 333 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-223ENST00000493618 PSMC4P43686 418 aa17.91■□□□□ 0.46
ATG4B-223ENST00000493618 SLC4A8Q2Y0W8 1093 aa17.91■□□□□ 0.46
ATG4B-223ENST00000493618 FASTKD5Q7L8L6 764 aaKnown RBP17.91■□□□□ 0.46
ATG4B-223ENST00000493618 ZNF333Q96JL9 665 aa17.91■□□□□ 0.46
ATG4B-223ENST00000493618 TRIM47Q96LD4 638 aa17.91■□□□□ 0.46
ATG4B-223ENST00000493618 SAP30BPQ9UHR5 308 aaKnown RBP17.91■□□□□ 0.46
ATG4B-223ENST00000493618 BRCA2P51587 3418 aa17.91■□□□□ 0.46
ATG4B-223ENST00000493618 IDH1O75874 414 aaKnown RBP17.9■□□□□ 0.46
ATG4B-223ENST00000493618 FMNL1O95466 1100 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-223ENST00000493618 MS4A1P11836 297 aa17.9■□□□□ 0.46
ATG4B-223ENST00000493618 CYP7A1P22680 504 aa17.9■□□□□ 0.46
ATG4B-223ENST00000493618 ERC1Q8IUD2 1116 aa17.9■□□□□ 0.46
ATG4B-223ENST00000493618 ANTXR1Q9H6X2 564 aa17.9■□□□□ 0.46
ATG4B-223ENST00000493618 FLT1P17948 1338 aa17.9■□□□□ 0.46
ATG4B-223ENST00000493618 NAV1Q8NEY1 1877 aa17.9■□□□□ 0.46
ATG4B-223ENST00000493618 PLCG2P16885 1265 aa17.89■□□□□ 0.45
ATG4B-223ENST00000493618 OSBPP22059 807 aa17.89■□□□□ 0.45
ATG4B-223ENST00000493618 PPP4CP60510 307 aa17.89■□□□□ 0.45
ATG4B-223ENST00000493618 TREML2Q5T2D2 321 aa17.89■□□□□ 0.45
ATG4B-223ENST00000493618 NBPF11Q86T75 865 aa17.89■□□□□ 0.45
ATG4B-223ENST00000493618 MAGEB6Q8N7X4 407 aa17.89■□□□□ 0.45
ATG4B-223ENST00000493618 MIGA1Q8NAN2 632 aa17.89■□□□□ 0.45
ATG4B-223ENST00000493618 BCRP11274 1271 aa17.88■□□□□ 0.45
ATG4B-223ENST00000493618 CAP2P40123 477 aa17.88■□□□□ 0.45
ATG4B-223ENST00000493618 SPP2Q13103 211 aa17.88■□□□□ 0.45
ATG4B-223ENST00000493618 SHROOM1Q2M3G4 852 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-223ENST00000493618 RHPN1Q8TCX5 695 aa17.88■□□□□ 0.45
ATG4B-223ENST00000493618 TMEM106CQ9BVX2 250 aa17.88■□□□□ 0.45
ATG4B-223ENST00000493618 PI4KBQ9UBF8 816 aa17.88■□□□□ 0.45
ATG4B-223ENST00000493618 RCAN3Q9UKA8 241 aa17.88■□□□□ 0.45
ATG4B-223ENST00000493618 PALD1Q9ULE6 856 aa17.88■□□□□ 0.45
ATG4B-223ENST00000493618 GNRH1P01148 92 aa17.87■□□□□ 0.45
ATG4B-223ENST00000493618 SIRT2Q8IXJ6 389 aa17.87■□□□□ 0.45
ATG4B-223ENST00000493618 SRRDQ9UH36 339 aa17.87■□□□□ 0.45
ATG4B-223ENST00000493618 HERC5Q9UII4 1024 aaKnown RBP17.87■□□□□ 0.45
ATG4B-223ENST00000493618 DDX19BQ9UMR2 479 aa17.87■□□□□ 0.45
ATG4B-223ENST00000493618 MKI67P46013 3256 aaKnown RBP17.87■□□□□ 0.45
ATG4B-223ENST00000493618 MYPNQ86TC9 1320 aa17.87■□□□□ 0.45
ATG4B-223ENST00000493618 DOCK3Q8IZD9 2030 aa17.87■□□□□ 0.45
ATG4B-223ENST00000493618 KIAA0100Q14667 2235 aaKnown RBP17.87■□□□□ 0.45
ATG4B-223ENST00000493618 MYH7P12883 1935 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 HMGCS2P54868 508 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 JAG1P78504 1218 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 C20orf194Q5TEA3 1177 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 CRACR2BQ8N4Y2 399 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-223ENST00000493618 ZNF280CQ8ND82 737 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 RAET1EQ8TD07 263 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 TRIM34Q9BYJ4 488 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 DHX36Q9H2U1 1008 aaKnown RBP17.86■□□□□ 0.45
ATG4B-223ENST00000493618 DNAJC18Q9H819 358 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 ZBTB40Q9NUA8 1239 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 PCDH10Q9P2E7 1040 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 AGTPBP1Q9UPW5 1226 aa17.86■□□□□ 0.45
ATG4B-223ENST00000493618 DDX60LQ5H9U9 1706 aaKnown RBP17.86■□□□□ 0.45
ATG4B-223ENST00000493618 USP17L5A8MUK1 530 aa17.85■□□□□ 0.45
ATG4B-223ENST00000493618 GDF11O95390 407 aa17.85■□□□□ 0.45
ATG4B-223ENST00000493618 PRMT2P55345 433 aa17.85■□□□□ 0.45
ATG4B-223ENST00000493618 FCGRTP55899 365 aa17.85■□□□□ 0.45
ATG4B-223ENST00000493618 PRKCZQ05513 592 aa17.85■□□□□ 0.45
ATG4B-223ENST00000493618 PRPF38BQ5VTL8 546 aaKnown RBP17.85■□□□□ 0.45
ATG4B-223ENST00000493618 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-223ENST00000493618 SMCR8Q8TEV9 937 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-223ENST00000493618 GABRQQ9UN88 632 aa17.85■□□□□ 0.45
ATG4B-223ENST00000493618 SLC45A1Q9Y2W3 748 aa17.85■□□□□ 0.45
ATG4B-223ENST00000493618 MYH8P13535 1937 aa17.84■□□□□ 0.45
ATG4B-223ENST00000493618 HOXD10P28358 340 aa17.84■□□□□ 0.45
ATG4B-223ENST00000493618 USP5P45974 858 aa17.84■□□□□ 0.45
ATG4B-223ENST00000493618 MAP3K12Q12852 859 aa17.84■□□□□ 0.45
ATG4B-223ENST00000493618 MTFR1Q15390 333 aa17.84■□□□□ 0.45
ATG4B-223ENST00000493618 ANKRD13CQ8N6S4 541 aa17.84■□□□□ 0.45
ATG4B-223ENST00000493618 HMMRO75330 724 aa17.83■□□□□ 0.44
ATG4B-223ENST00000493618 CLASRPQ8N2M8 674 aaKnown RBP17.83■□□□□ 0.44
ATG4B-223ENST00000493618 PROCA1Q8NCQ7 364 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-223ENST00000493618 KIF1BPQ96EK5 621 aa17.83■□□□□ 0.44
ATG4B-223ENST00000493618 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
ATG4B-223ENST00000493618 AS3MTQ9HBK9 375 aa17.83■□□□□ 0.44
ATG4B-223ENST00000493618 HLA-DOAP06340 250 aa17.82■□□□□ 0.44
ATG4B-223ENST00000493618 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
ATG4B-223ENST00000493618 GRK4P32298 578 aa17.82■□□□□ 0.44
ATG4B-223ENST00000493618 MTMR2Q13614 643 aa17.82■□□□□ 0.44
ATG4B-223ENST00000493618 FOXP4Q8IVH2 680 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-223ENST00000493618 TBC1D2Q9BYX2 928 aa17.82■□□□□ 0.44
ATG4B-223ENST00000493618 BIN2Q9UBW5 565 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-223ENST00000493618 BAZ2AQ9UIF9 1905 aaKnown RBP17.82■□□□□ 0.44
ATG4B-223ENST00000493618 PLXNB2O15031 1838 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms