RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PA2G4Q9UQ80 394 aaKnown RBP21.9■■□□□ 1.1
NUP50-218ENST00000493456 ALPK3Q96L96 1907 aa21.9■■□□□ 1.1
NUP50-218ENST00000493456 RHBDL3P58872 404 aa21.89■■□□□ 1.09
NUP50-218ENST00000493456 ERICH6Q7L0X2 663 aa21.89■■□□□ 1.09
NUP50-218ENST00000493456 CCDC84Q86UT8 332 aaPredicted RBP21.89■■□□□ 1.09
NUP50-218ENST00000493456 ZNF280CQ8ND82 737 aa21.89■■□□□ 1.09
NUP50-218ENST00000493456 DIS3LQ8TF46 1054 aaKnown RBP21.89■■□□□ 1.09
NUP50-218ENST00000493456 LRCH3Q96II8 777 aa21.89■■□□□ 1.09
NUP50-218ENST00000493456 GDF15Q99988 308 aa21.89■■□□□ 1.09
NUP50-218ENST00000493456 RPTORQ8N122 1335 aa21.88■■□□□ 1.09
NUP50-218ENST00000493456 MECOMQ03112 1051 aa21.88■■□□□ 1.09
NUP50-218ENST00000493456 SPP2Q13103 211 aa21.88■■□□□ 1.09
NUP50-218ENST00000493456 MVPQ14764 893 aaKnown RBP21.88■■□□□ 1.09
NUP50-218ENST00000493456 AKAP2Q9Y2D5 859 aa21.88■■□□□ 1.09
NUP50-218ENST00000493456 UNC80Q8N2C7 3258 aa21.87■■□□□ 1.09
NUP50-218ENST00000493456 TIMM10P62072 90 aa21.87■■□□□ 1.09
NUP50-218ENST00000493456 GSTO1P78417 241 aa21.87■■□□□ 1.09
NUP50-218ENST00000493456 NBPF3Q9H094 633 aa21.87■■□□□ 1.09
NUP50-218ENST00000493456 HMX1Q9NP08 348 aaPredicted RBP21.87■■□□□ 1.09
NUP50-218ENST00000493456 DOCK3Q8IZD9 2030 aa21.87■■□□□ 1.09
NUP50-218ENST00000493456 A0A1B0GUL7 405 aa21.86■■□□□ 1.09
NUP50-218ENST00000493456 HMGCS2P54868 508 aa21.86■■□□□ 1.09
NUP50-218ENST00000493456 SLFN5Q08AF3 891 aa21.86■■□□□ 1.09
NUP50-218ENST00000493456 C7orf61Q8IZ16 206 aa21.86■■□□□ 1.09
NUP50-218ENST00000493456 XAGE2Q96GT9 111 aa21.86■■□□□ 1.09
NUP50-218ENST00000493456 LAMA2P24043 3122 aaKnown RBP21.86■■□□□ 1.09
NUP50-218ENST00000493456 ATAD5Q96QE3 1844 aa21.85■■□□□ 1.09
NUP50-218ENST00000493456 LDHCP07864 332 aa21.85■■□□□ 1.09
NUP50-218ENST00000493456 CAP2P40123 477 aa21.85■■□□□ 1.09
NUP50-218ENST00000493456 SH3D19Q5HYK7 790 aa21.85■■□□□ 1.09
NUP50-218ENST00000493456 ASCC2Q9H1I8 757 aaPredicted RBP21.85■■□□□ 1.09
NUP50-218ENST00000493456 AS3MTQ9HBK9 375 aa21.85■■□□□ 1.09
NUP50-218ENST00000493456 HERC5Q9UII4 1024 aaKnown RBP21.85■■□□□ 1.09
NUP50-218ENST00000493456 GJD2Q9UKL4 321 aa21.85■■□□□ 1.09
NUP50-218ENST00000493456 FAM196BA6NMK8 535 aa21.84■■□□□ 1.09
NUP50-218ENST00000493456 USP17L5A8MUK1 530 aa21.84■■□□□ 1.09
NUP50-218ENST00000493456 ZNF384Q8TF68 577 aa21.84■■□□□ 1.09
NUP50-218ENST00000493456 API5Q9BZZ5 524 aaKnown RBP21.84■■□□□ 1.09
NUP50-218ENST00000493456 MORF4L1Q9UBU8 362 aa21.84■■□□□ 1.09
NUP50-218ENST00000493456 DNAH12Q6ZR08 3092 aa21.84■■□□□ 1.09
NUP50-218ENST00000493456 CT47B1P0C2W7 299 aaPredicted RBP21.83■■□□□ 1.09
NUP50-218ENST00000493456 NSUN4Q96CB9 384 aaKnown RBP21.83■■□□□ 1.09
NUP50-218ENST00000493456 C11orf49Q9H6J7 331 aa21.83■■□□□ 1.09
NUP50-218ENST00000493456 OGDHLQ9ULD0 1010 aa21.83■■□□□ 1.09
NUP50-218ENST00000493456 ZMYND8Q9ULU4 1186 aaPredicted RBP21.83■■□□□ 1.09
NUP50-218ENST00000493456 DDX60LQ5H9U9 1706 aaKnown RBP21.83■■□□□ 1.08
NUP50-218ENST00000493456 MNX1P50219 401 aaPredicted RBP21.82■■□□□ 1.08
NUP50-218ENST00000493456 LRIT3Q3SXY7 679 aa21.82■■□□□ 1.08
NUP50-218ENST00000493456 IRX3P78415 501 aaPredicted RBP21.81■■□□□ 1.08
NUP50-218ENST00000493456 TFCP2Q12800 502 aa21.81■■□□□ 1.08
NUP50-218ENST00000493456 TRIM32Q13049 653 aa21.81■■□□□ 1.08
NUP50-218ENST00000493456 MAP3K21Q5TCX8 1036 aa21.81■■□□□ 1.08
NUP50-218ENST00000493456 SPATA5Q8NB90 893 aa21.81■■□□□ 1.08
NUP50-218ENST00000493456 SOCS4Q8WXH5 440 aa21.81■■□□□ 1.08
NUP50-218ENST00000493456 TRIB2Q92519 343 aa21.81■■□□□ 1.08
NUP50-218ENST00000493456 MEIS3Q99687 375 aa21.81■■□□□ 1.08
NUP50-218ENST00000493456 HMG20BQ9P0W2 317 aa21.81■■□□□ 1.08
NUP50-218ENST00000493456 NOB1Q9ULX3 412 aaKnown RBP21.81■■□□□ 1.08
NUP50-218ENST00000493456 CUL9Q8IWT3 2517 aa21.81■■□□□ 1.08
NUP50-218ENST00000493456 SRGAP3O43295 1099 aa21.8■■□□□ 1.08
NUP50-218ENST00000493456 TDHQ8IZJ6 230 aa21.8■■□□□ 1.08
NUP50-218ENST00000493456 DEFB123Q8N688 67 aa21.8■■□□□ 1.08
NUP50-218ENST00000493456 WDR18Q9BV38 432 aa21.8■■□□□ 1.08
NUP50-218ENST00000493456 PLXNB2O15031 1838 aa21.8■■□□□ 1.08
NUP50-218ENST00000493456 XRCC5P13010 732 aaKnown RBP21.79■■□□□ 1.08
NUP50-218ENST00000493456 ARID4AP29374 1257 aaPredicted RBP21.79■■□□□ 1.08
NUP50-218ENST00000493456 HOXA7P31268 230 aaPredicted RBP21.79■■□□□ 1.08
NUP50-218ENST00000493456 MAGEA10P43363 369 aaPredicted RBP21.79■■□□□ 1.08
NUP50-218ENST00000493456 BACE1P56817 501 aa21.79■■□□□ 1.08
NUP50-218ENST00000493456 MTX1Q13505 466 aa21.79■■□□□ 1.08
NUP50-218ENST00000493456 RRP1BQ14684 758 aaKnown RBP21.79■■□□□ 1.08
NUP50-218ENST00000493456 GORABQ5T7V8 394 aa21.79■■□□□ 1.08
NUP50-218ENST00000493456 TEX11Q8IYF3 940 aa21.79■■□□□ 1.08
NUP50-218ENST00000493456 TRMT44Q8IYL2 757 aaKnown RBP21.79■■□□□ 1.08
NUP50-218ENST00000493456 NEUROD6Q96NK8 337 aa21.79■■□□□ 1.08
NUP50-218ENST00000493456 NUDT12Q9BQG2 462 aa21.79■■□□□ 1.08
NUP50-218ENST00000493456 DHX36Q9H2U1 1008 aaKnown RBP21.79■■□□□ 1.08
NUP50-218ENST00000493456 TMOD4Q9NZQ9 345 aa21.79■■□□□ 1.08
NUP50-218ENST00000493456 RAI14Q9P0K7 980 aa21.79■■□□□ 1.08
NUP50-218ENST00000493456 PI4KBQ9UBF8 816 aa21.79■■□□□ 1.08
NUP50-218ENST00000493456 ASNSP08243 561 aa21.78■■□□□ 1.08
NUP50-218ENST00000493456 GNAI3P08754 354 aa21.78■■□□□ 1.08
NUP50-218ENST00000493456 PRKAR2AP13861 404 aaKnown RBP21.78■■□□□ 1.08
NUP50-218ENST00000493456 MTMR2Q13614 643 aa21.78■■□□□ 1.08
NUP50-218ENST00000493456 PI16Q6UXB8 463 aa21.78■■□□□ 1.08
NUP50-218ENST00000493456 GPRC5AQ8NFJ5 357 aa21.78■■□□□ 1.08
NUP50-218ENST00000493456 NOL10Q9BSC4 688 aaKnown RBP21.78■■□□□ 1.08
NUP50-218ENST00000493456 ZNF316A6NFI3 1004 aaPredicted RBP21.77■■□□□ 1.08
NUP50-218ENST00000493456 SYN1P17600 705 aa21.77■■□□□ 1.08
NUP50-218ENST00000493456 CYP2B6P20813 491 aa21.77■■□□□ 1.08
NUP50-218ENST00000493456 PDE3AQ14432 1141 aa21.77■■□□□ 1.08
NUP50-218ENST00000493456 TBC1D9Q6ZT07 1266 aa21.77■■□□□ 1.08
NUP50-218ENST00000493456 STXBP5LQ9Y2K9 1186 aa21.77■■□□□ 1.08
NUP50-218ENST00000493456 C19orf81C9J6K1 198 aa21.76■■□□□ 1.07
NUP50-218ENST00000493456 PLCG2P16885 1265 aa21.76■■□□□ 1.07
NUP50-218ENST00000493456 MAPK4P31152 587 aa21.76■■□□□ 1.07
NUP50-218ENST00000493456 HERVK_113P62684 666 aa21.76■■□□□ 1.07
NUP50-218ENST00000493456 TRMT2AQ8IZ69 625 aaKnown RBP21.76■■□□□ 1.07
NUP50-218ENST00000493456 GTF3C2Q8WUA4 911 aaPredicted RBP21.76■■□□□ 1.07
NUP50-218ENST00000493456 CDCA7LQ96GN5 454 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms