RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 PPP6R2O75170 966 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 NAPAP54920 295 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 RGS22Q8NE09 1264 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 NAP1L4Q99733 375 aaKnown RBP8.38□□□□□ -1.07
NPHP3-208ENST00000490993 EHMT1Q9H9B1 1298 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 PNPLA7Q6ZV29 1317 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 BBOX1O75936 387 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 ADD1P35611 737 aaKnown RBP8.38□□□□□ -1.07
NPHP3-208ENST00000490993 UBASH3AP57075 661 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 GPS2Q13227 327 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 SF3B3Q15393 1217 aaKnown RBP8.38□□□□□ -1.07
NPHP3-208ENST00000490993 SYNE4Q8N205 404 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 IQUBQ8NA54 791 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 MARCH10Q8NA82 808 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-208ENST00000490993 CUL5Q93034 780 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 PAXBP1Q9Y5B6 917 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 CAMTA1Q9Y6Y1 1673 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 PDE6BP35913 854 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 FAM114A1Q8IWE2 563 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 LCORLQ8N3X6 602 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 KIF18AQ8NI77 898 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 MYL10Q9BUA6 226 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 RNF26Q9BY78 433 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-208ENST00000490993 FOXP1Q9H334 677 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-208ENST00000490993 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
NPHP3-208ENST00000490993 NR1I2O75469 434 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 IFNAR1P17181 557 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 GRAPQ13588 217 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 GRAPLQ8TC17 118 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-208ENST00000490993 CNTNAP4Q9C0A0 1308 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 STK36Q9NRP7 1315 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 STAT6P42226 847 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 ZNF75DP51815 510 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 MYL5Q02045 173 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 SDR42E1Q8WUS8 393 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 TIGD1Q96MW7 591 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 TSG101Q99816 390 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 PCDHA7Q9UN72 937 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 PARP4Q9UKK3 1724 aaKnown RBP8.37□□□□□ -1.07
NPHP3-208ENST00000490993 ZNF76P36508 570 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 SLC39A14Q15043 492 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 GALNT17Q6IS24 598 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 KLHL10Q6JEL2 608 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 CCAR2Q8N163 923 aaKnown RBP8.37□□□□□ -1.07
NPHP3-208ENST00000490993 HDAC9Q9UKV0 1011 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 MINPP1Q9UNW1 487 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 SLC4A8Q2Y0W8 1093 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 NLGN1Q8N2Q7 840 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 CHAMP1Q96JM3 812 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 LUC7LQ9NQ29 371 aaKnown RBP8.37□□□□□ -1.07
NPHP3-208ENST00000490993 IMPACTQ9P2X3 320 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 PRDM1O75626 825 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 TNNT1P13805 278 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 RBM6P78332 1123 aaKnown RBP8.37□□□□□ -1.07
NPHP3-208ENST00000490993 KIF23Q02241 960 aaPredicted RBP8.37□□□□□ -1.07
NPHP3-208ENST00000490993 PICALMQ13492 652 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 MLKLQ8NB16 471 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 ZNF397Q8NF99 534 aaPredicted RBP8.37□□□□□ -1.07
NPHP3-208ENST00000490993 GLT8D2Q9H1C3 349 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 VAT1LQ9HCJ6 419 aa8.37□□□□□ -1.07
NPHP3-208ENST00000490993 TFAP4Q01664 338 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 TTC38Q5R3I4 469 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 DTHD1Q6ZMT9 781 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 DHX58Q96C10 678 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 KIAA1468Q9P260 1216 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 DYNC1I1O14576 645 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 NTSR2O95665 410 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 PPP1R2P41236 205 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 FKBP15Q5T1M5 1219 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 DPP8Q6V1X1 898 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-208ENST00000490993 SUPT20HQ8NEM7 779 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 ZSWIM5Q9P217 1185 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 JAG2Q9Y219 1238 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 MRC1P22897 1456 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 PLCD1P51178 756 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 TERF1P54274 439 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 SCARF1Q14162 830 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 INTS5Q6P9B9 1019 aaKnown RBP8.36□□□□□ -1.07
NPHP3-208ENST00000490993 QTRT2Q9H974 415 aaKnown RBP8.36□□□□□ -1.07
NPHP3-208ENST00000490993 RRAGDQ9NQL2 400 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-208ENST00000490993 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.36□□□□□ -1.07
NPHP3-208ENST00000490993 RIMBP2O15034 1052 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 CLSTN1O94985 981 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 SKILP12757 684 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 PFKFB1P16118 471 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 ISM2Q6H9L7 571 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 STOX1Q6ZVD7 989 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 LINC00301Q8NCQ3 95 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 USP54Q70EL1 1684 aa8.36□□□□□ -1.07
NPHP3-208ENST00000490993 A0A0U1RQG5 324 aaPredicted RBP8.35□□□□□ -1.07
NPHP3-208ENST00000490993 ZNF500O60304 480 aaPredicted RBP8.35□□□□□ -1.07
NPHP3-208ENST00000490993 SERPINB2P05120 415 aa8.35□□□□□ -1.07
NPHP3-208ENST00000490993 AFMP43652 599 aa8.35□□□□□ -1.07
NPHP3-208ENST00000490993 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
NPHP3-208ENST00000490993 RRAGBQ5VZM2 374 aa8.35□□□□□ -1.07
NPHP3-208ENST00000490993 TBC1D9BQ66K14 1250 aa8.35□□□□□ -1.07
NPHP3-208ENST00000490993 KRT25Q7Z3Z0 450 aa8.35□□□□□ -1.07
NPHP3-208ENST00000490993 SGMS1Q86VZ5 419 aa8.35□□□□□ -1.07
NPHP3-208ENST00000490993 TBC1D10CQ8IV04 446 aa8.35□□□□□ -1.07
NPHP3-208ENST00000490993 GOLGA6L1Q8N7Z2 621 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms