RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 TAOK2Q9UL54 1235 aa19.17■□□□□ 0.66
LMNB2-203ENST00000490554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.17■□□□□ 0.66
LMNB2-203ENST00000490554 A0A1W2PPC1 479 aa19.16■□□□□ 0.66
LMNB2-203ENST00000490554 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
LMNB2-203ENST00000490554 MAP4K4O95819 1239 aaPredicted RBP19.16■□□□□ 0.66
LMNB2-203ENST00000490554 MTX1Q13505 466 aa19.16■□□□□ 0.66
LMNB2-203ENST00000490554 ZNF280CQ8ND82 737 aa19.16■□□□□ 0.66
LMNB2-203ENST00000490554 NSUN4Q96CB9 384 aaKnown RBP19.16■□□□□ 0.66
LMNB2-203ENST00000490554 HMG20BQ9P0W2 317 aa19.16■□□□□ 0.66
LMNB2-203ENST00000490554 COL2A1P02458 1487 aaPredicted RBP19.16■□□□□ 0.66
LMNB2-203ENST00000490554 LDHCP07864 332 aa19.15■□□□□ 0.66
LMNB2-203ENST00000490554 GCLCP48506 637 aaPredicted RBP19.15■□□□□ 0.66
LMNB2-203ENST00000490554 GSTO1P78417 241 aa19.15■□□□□ 0.66
LMNB2-203ENST00000490554 PI16Q6UXB8 463 aa19.15■□□□□ 0.66
LMNB2-203ENST00000490554 SPATA5Q8NB90 893 aa19.15■□□□□ 0.66
LMNB2-203ENST00000490554 PAWRQ96IZ0 340 aaKnown RBP19.15■□□□□ 0.66
LMNB2-203ENST00000490554 TBC1D2Q9BYX2 928 aa19.15■□□□□ 0.66
LMNB2-203ENST00000490554 GNAI3P08754 354 aa19.14■□□□□ 0.65
LMNB2-203ENST00000490554 CAP2P40123 477 aa19.14■□□□□ 0.65
LMNB2-203ENST00000490554 HMGCS2P54868 508 aa19.14■□□□□ 0.65
LMNB2-203ENST00000490554 RRP1BQ14684 758 aaKnown RBP19.14■□□□□ 0.65
LMNB2-203ENST00000490554 TBC1D9Q6ZT07 1266 aa19.14■□□□□ 0.65
LMNB2-203ENST00000490554 NEUROD6Q96NK8 337 aa19.14■□□□□ 0.65
LMNB2-203ENST00000490554 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.14■□□□□ 0.659e-6■■■■■ 32.4
LMNB2-203ENST00000490554 HMGCRP04035 888 aa19.13■□□□□ 0.65
LMNB2-203ENST00000490554 PABPC4Q13310 644 aaKnown RBP eCLIP19.13■□□□□ 0.65
LMNB2-203ENST00000490554 SH3D19Q5HYK7 790 aa19.13■□□□□ 0.65
LMNB2-203ENST00000490554 NECAB2Q7Z6G3 386 aa19.13■□□□□ 0.65
LMNB2-203ENST00000490554 DIS3LQ8TF46 1054 aaKnown RBP19.13■□□□□ 0.65
LMNB2-203ENST00000490554 ARHGAP45Q92619 1136 aa19.13■□□□□ 0.65
LMNB2-203ENST00000490554 ASCC2Q9H1I8 757 aaPredicted RBP19.13■□□□□ 0.65
LMNB2-203ENST00000490554 GJD2Q9UKL4 321 aa19.13■□□□□ 0.65
LMNB2-203ENST00000490554 DOCK3Q8IZD9 2030 aa19.12■□□□□ 0.65
LMNB2-203ENST00000490554 USP17L5A8MUK1 530 aa19.12■□□□□ 0.65
LMNB2-203ENST00000490554 ARID4AP29374 1257 aaPredicted RBP19.12■□□□□ 0.65
LMNB2-203ENST00000490554 RARSP54136 660 aaKnown RBP19.12■□□□□ 0.65
LMNB2-203ENST00000490554 RAI14Q9P0K7 980 aa19.12■□□□□ 0.65
LMNB2-203ENST00000490554 STAP2Q9UGK3 403 aa19.12■□□□□ 0.65
LMNB2-203ENST00000490554 SOX1O00570 391 aaPredicted RBP19.11■□□□□ 0.65
LMNB2-203ENST00000490554 GORABQ5T7V8 394 aa19.11■□□□□ 0.65
LMNB2-203ENST00000490554 ANKLE1Q8NAG6 615 aa19.11■□□□□ 0.65
LMNB2-203ENST00000490554 HERC5Q9UII4 1024 aaKnown RBP19.11■□□□□ 0.65
LMNB2-203ENST00000490554 RPTORQ8N122 1335 aa19.1■□□□□ 0.65
LMNB2-203ENST00000490554 MCAMP43121 646 aa19.1■□□□□ 0.65
LMNB2-203ENST00000490554 TRIM32Q13049 653 aa19.1■□□□□ 0.65
LMNB2-203ENST00000490554 TEX11Q8IYF3 940 aa19.1■□□□□ 0.65
LMNB2-203ENST00000490554 AS3MTQ9HBK9 375 aa19.1■□□□□ 0.65
LMNB2-203ENST00000490554 MORF4L1Q9UBU8 362 aa19.1■□□□□ 0.65
LMNB2-203ENST00000490554 LOC285556D6RIA3 1793 aa19.1■□□□□ 0.65
LMNB2-203ENST00000490554 SH3RF3Q8TEJ3 882 aaPredicted RBP19.09■□□□□ 0.65
LMNB2-203ENST00000490554 LRCH3Q96II8 777 aa19.09■□□□□ 0.65
LMNB2-203ENST00000490554 GDF15Q99988 308 aa19.09■□□□□ 0.65
LMNB2-203ENST00000490554 WDR18Q9BV38 432 aa19.09■□□□□ 0.65
LMNB2-203ENST00000490554 HMX1Q9NP08 348 aaPredicted RBP19.09■□□□□ 0.65
LMNB2-203ENST00000490554 LRP2BPQ9P2M1 347 aa19.09■□□□□ 0.65
LMNB2-203ENST00000490554 PI4KBQ9UBF8 816 aa19.09■□□□□ 0.65
LMNB2-203ENST00000490554 MNX1P50219 401 aaPredicted RBP19.08■□□□□ 0.64
LMNB2-203ENST00000490554 NBPF3Q9H094 633 aa19.08■□□□□ 0.64
LMNB2-203ENST00000490554 DHX36Q9H2U1 1008 aaKnown RBP19.08■□□□□ 0.64
LMNB2-203ENST00000490554 PNMA6EA0A0J9YXQ4 647 aa19.07■□□□□ 0.64
LMNB2-203ENST00000490554 UQCRFS1P1P0C7P4 283 aa19.07■□□□□ 0.64
LMNB2-203ENST00000490554 HOXA7P31268 230 aaPredicted RBP19.07■□□□□ 0.64
LMNB2-203ENST00000490554 BMP8BP34820 402 aa19.07■□□□□ 0.64
LMNB2-203ENST00000490554 BACE1P56817 501 aa19.07■□□□□ 0.64
LMNB2-203ENST00000490554 G3BP1Q13283 466 aaKnown RBP eCLIP19.07■□□□□ 0.647e-7■■□□□ 13.4
LMNB2-203ENST00000490554 MTMR2Q13614 643 aa19.07■□□□□ 0.64
LMNB2-203ENST00000490554 C7orf61Q8IZ16 206 aa19.07■□□□□ 0.64
LMNB2-203ENST00000490554 TRIB2Q92519 343 aa19.07■□□□□ 0.64
LMNB2-203ENST00000490554 LAMA3Q16787 3333 aa19.06■□□□□ 0.64
LMNB2-203ENST00000490554 GNAI2P04899 355 aa19.06■□□□□ 0.64
LMNB2-203ENST00000490554 ASNSP08243 561 aa19.06■□□□□ 0.64
LMNB2-203ENST00000490554 IRX3P78415 501 aaPredicted RBP19.06■□□□□ 0.64
LMNB2-203ENST00000490554 JAG1P78504 1218 aa19.06■□□□□ 0.64
LMNB2-203ENST00000490554 MAP3K21Q5TCX8 1036 aa19.06■□□□□ 0.64
LMNB2-203ENST00000490554 METTL16Q86W50 562 aaKnown RBP19.06■□□□□ 0.64
LMNB2-203ENST00000490554 P2RX7Q99572 595 aaKnown RBP19.06■□□□□ 0.64
LMNB2-203ENST00000490554 NOL10Q9BSC4 688 aaKnown RBP19.06■□□□□ 0.64
LMNB2-203ENST00000490554 DNAJC18Q9H819 358 aa19.06■□□□□ 0.64
LMNB2-203ENST00000490554 AATFQ9NY61 560 aaKnown RBP eCLIP19.06■□□□□ 0.64
LMNB2-203ENST00000490554 OGDHLQ9ULD0 1010 aa19.06■□□□□ 0.64
LMNB2-203ENST00000490554 ZMYND8Q9ULU4 1186 aaPredicted RBP19.06■□□□□ 0.64
LMNB2-203ENST00000490554 BAG3O95817 575 aa19.05■□□□□ 0.64
LMNB2-203ENST00000490554 PPP4CP60510 307 aa19.05■□□□□ 0.64
LMNB2-203ENST00000490554 NAA16Q6N069 864 aaPredicted RBP19.05■□□□□ 0.64
LMNB2-203ENST00000490554 FOXP4Q8IVH2 680 aaPredicted RBP19.05■□□□□ 0.64
LMNB2-203ENST00000490554 SLC17A8Q8NDX2 589 aa19.05■□□□□ 0.64
LMNB2-203ENST00000490554 C11orf49Q9H6J7 331 aa19.05■□□□□ 0.64
LMNB2-203ENST00000490554 TXNRD2Q9NNW7 524 aa19.05■□□□□ 0.64
LMNB2-203ENST00000490554 TMOD4Q9NZQ9 345 aa19.05■□□□□ 0.64
LMNB2-203ENST00000490554 ALPK3Q96L96 1907 aa19.05■□□□□ 0.64
LMNB2-203ENST00000490554 C19orf81C9J6K1 198 aa19.04■□□□□ 0.64
LMNB2-203ENST00000490554 PEX10O60683 326 aa19.04■□□□□ 0.64
LMNB2-203ENST00000490554 XRCC5P13010 732 aaKnown RBP19.04■□□□□ 0.64
LMNB2-203ENST00000490554 TRIM27P14373 513 aa19.04■□□□□ 0.64
LMNB2-203ENST00000490554 PLCG2P16885 1265 aa19.04■□□□□ 0.64
LMNB2-203ENST00000490554 CYP2B6P20813 491 aa19.04■□□□□ 0.64
LMNB2-203ENST00000490554 HERVK_113P62684 666 aa19.04■□□□□ 0.64
LMNB2-203ENST00000490554 MAPKAPK5Q8IW41 473 aa19.04■□□□□ 0.64
LMNB2-203ENST00000490554 GPRC5AQ8NFJ5 357 aa19.04■□□□□ 0.64
LMNB2-203ENST00000490554 TGFBRAP1Q8WUH2 860 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms