RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	HERC5	Q9UII4	1024 aa	Known RBP	13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	TTC41P	Q6P2S7	1318 aa		13.41	□□□□□ -0.26
GGA1-222	ENST00000489772	HLA-DOA	P06340	250 aa		13.41	□□□□□ -0.26
GGA1-222	ENST00000489772	ZSCAN25	Q6NSZ9	544 aa		13.41	□□□□□ -0.26
GGA1-222	ENST00000489772	EXOC6	Q8TAG9	804 aa		13.41	□□□□□ -0.26
GGA1-222	ENST00000489772	SP7	Q8TDD2	431 aa	Predicted RBP	13.41	□□□□□ -0.26
GGA1-222	ENST00000489772	PTPN18	Q99952	460 aa		13.41	□□□□□ -0.26
GGA1-222	ENST00000489772	RIOK1	Q9BRS2	568 aa	Known RBP	13.41	□□□□□ -0.26
GGA1-222	ENST00000489772	MAST2	Q6P0Q8	1798 aa		13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	TCRBV5S4A2T	A0A5A2	114 aa		13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	ERC2	O15083	957 aa		13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	SLURP2	P0DP57	97 aa		13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	ADD2	P35612	726 aa		13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	NOM1	Q5C9Z4	860 aa	Known RBP	13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	TSHZ3	Q63HK5	1081 aa		13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	BRI3BP	Q8WY22	251 aa		13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	SAP30BP	Q9UHR5	308 aa	Known RBP	13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	PALD1	Q9ULE6	856 aa		13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	ZHX2	Q9Y6X8	837 aa		13.4	□□□□□ -0.26
GGA1-222	ENST00000489772	FAM196B	A6NMK8	535 aa		13.39	□□□□□ -0.27
GGA1-222	ENST00000489772	GPR25	O00155	361 aa		13.39	□□□□□ -0.27
GGA1-222	ENST00000489772	PTPRA	P18433	802 aa		13.39	□□□□□ -0.27
GGA1-222	ENST00000489772	UBE3C	Q15386	1083 aa		13.39	□□□□□ -0.27
GGA1-222	ENST00000489772	IFFO2	Q5TF58	517 aa		13.39	□□□□□ -0.27
GGA1-222	ENST00000489772	KCNH4	Q9UQ05	1017 aa		13.39	□□□□□ -0.27
GGA1-222	ENST00000489772	CXCL11	O14625	94 aa		13.38	□□□□□ -0.27
GGA1-222	ENST00000489772	GLRX3	O76003	335 aa	Known RBP	13.38	□□□□□ -0.27
GGA1-222	ENST00000489772	MX1	P20591	662 aa		13.38	□□□□□ -0.27
GGA1-222	ENST00000489772	TTC6	Q86TZ1	520 aa		13.38	□□□□□ -0.27
GGA1-222	ENST00000489772	METTL16	Q86W50	562 aa	Known RBP	13.38	□□□□□ -0.27
GGA1-222	ENST00000489772	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.38	□□□□□ -0.27
GGA1-222	ENST00000489772	CRHR2	Q13324	411 aa		13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	FAM43A	Q8N2R8	423 aa		13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	LCORL	Q8N3X6	602 aa		13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	KBTBD3	Q8NAB2	608 aa		13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	R3HDML	Q9H3Y0	253 aa		13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	ARMT1	Q9H993	441 aa		13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	ZFYVE28	Q9HCC9	887 aa		13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	ZCCHC17	Q9NP64	241 aa	Known RBP	13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	AFG3L2	Q9Y4W6	797 aa		13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	OTOF	Q9HC10	1997 aa		13.37	□□□□□ -0.27
GGA1-222	ENST00000489772	BTBD19	C9JJ37	291 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	FKTN	O75072	461 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	MBD4	O95243	580 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	POLR3D	P05423	398 aa	Predicted RBP	13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	CAP2	P40123	477 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	TAF1C	Q15572	869 aa	Predicted RBP	13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	SLC4A8	Q2Y0W8	1093 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	SLFNL1	Q499Z3	407 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	FASTKD5	Q7L8L6	764 aa	Known RBP	13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	SMC5	Q8IY18	1101 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	PI4K2B	Q8TCG2	481 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	TBC1D2	Q9BYX2	928 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	EHD4	Q9H223	541 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	MCM9	Q9NXL9	1143 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	SERPINB13	Q9UIV8	391 aa		13.36	□□□□□ -0.27
GGA1-222	ENST00000489772	TRIM75P	A6NK02	468 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	RNF113A	O15541	343 aa	Known RBP	13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	IGHD	P01880	384 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	ZFY	P08048	801 aa	Predicted RBP	13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	DGKZ	Q13574	1117 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	B4GALNT3	Q6L9W6	998 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	CTU1	Q7Z7A3	348 aa	Known RBP	13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	ANKRD23	Q86SG2	305 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	SDR42E1	Q8WUS8	393 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	DDRGK1	Q96HY6	314 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	DNAJC18	Q9H819	358 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	ATP8A2	Q9NTI2	1148 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772	GINM1	Q9NU53	330 aa		13.35	□□□□□ -0.27
GGA1-222	ENST00000489772		A0A0G2JLL6	359 aa	Predicted RBP	13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	USP17L5	A8MUK1	530 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	CHGB	P05060	677 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	ASNS	P08243	561 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	IRX6	P78412	446 aa	Predicted RBP	13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	RRP1B	Q14684	758 aa	Known RBP	13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	ZNF280C	Q8ND82	737 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	LNPK	Q9C0E8	428 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	MCOLN1	Q9GZU1	580 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	PUS7L	Q9H0K6	701 aa	Known RBP	13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	AS3MT	Q9HBK9	375 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	STAP2	Q9UGK3	403 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	SALL3	Q9BXA9	1300 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	DOCK2	Q92608	1830 aa		13.34	□□□□□ -0.27
GGA1-222	ENST00000489772	PDHX	O00330	501 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	PRKAB2	O43741	272 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	PLCD1	P51178	756 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	PDE1A	P54750	535 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	SPP2	Q13103	211 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	MOGS	Q13724	837 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	TATDN1	Q6P1N9	297 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	CCDC84	Q86UT8	332 aa	Predicted RBP	13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	CHD1L	Q86WJ1	897 aa		13.33	□□□□□ -0.27

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