RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 RDH13Q8NBN7 331 aa7.49□□□□□ -1.21
SF3A3-208ENST00000489537 WDR66Q8TBY9 1149 aa7.49□□□□□ -1.21
SF3A3-208ENST00000489537 RPGRQ92834 1020 aaKnown RBP7.49□□□□□ -1.21
SF3A3-208ENST00000489537 TMEM87BQ96K49 555 aa7.49□□□□□ -1.21
SF3A3-208ENST00000489537 CCDC85AQ96PX6 553 aaPredicted RBP7.49□□□□□ -1.21
SF3A3-208ENST00000489537 LRP2BPQ9P2M1 347 aa7.49□□□□□ -1.21
SF3A3-208ENST00000489537 FAM177BA6PVY3 158 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 PATL2C9JE40 543 aaKnown RBP7.48□□□□□ -1.21
SF3A3-208ENST00000489537 GPAA1O43292 621 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 STX6O43752 255 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 BAG4O95429 457 aaKnown RBP7.48□□□□□ -1.21
SF3A3-208ENST00000489537 ADH1BP00325 375 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 CYP21A2P08686 494 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 SLC10A3P09131 477 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 PDE6AP16499 860 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 ADORA1P30542 326 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 HIBADHP31937 336 aaKnown RBP7.48□□□□□ -1.21
SF3A3-208ENST00000489537 EVCP57679 992 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 GRAPQ13588 217 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 GRIPAP1Q4V328 841 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 CCDC178Q5BJE1 867 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 SYNE3Q6ZMZ3 975 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 ZNF804AQ7Z570 1209 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 ZNF589Q86UQ0 364 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-208ENST00000489537 SULF1Q8IWU6 871 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 AMOTL1Q8IY63 956 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 GRAPLQ8TC17 118 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-208ENST00000489537 ANP32BQ92688 251 aaKnown RBP7.48□□□□□ -1.21
SF3A3-208ENST00000489537 CRAMP1Q96RY5 1269 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 NOL10Q9BSC4 688 aaKnown RBP7.48□□□□□ -1.21
SF3A3-208ENST00000489537 AGXT2Q9BYV1 514 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 NAPBQ9H115 298 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 IL25Q9H293 177 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 ZSCAN16Q9H4T2 348 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-208ENST00000489537 MINPP1Q9UNW1 487 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 BCS1LQ9Y276 419 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-208ENST00000489537 XDHP47989 1333 aa7.48□□□□□ -1.21
SF3A3-208ENST00000489537 CCDC196A0A1B0GTZ2 297 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 ERICH2A1L162 156 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 RNF223E7ERA6 249 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 TLL1O43897 1013 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 PFKFB2O60825 505 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 APPP05067 770 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 ZSCAN22P10073 491 aaPredicted RBP7.47□□□□□ -1.21
SF3A3-208ENST00000489537 ATP2B4P23634 1241 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 ALDH1B1P30837 517 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 HOXA10P31260 410 aaPredicted RBP7.47□□□□□ -1.21
SF3A3-208ENST00000489537 PHKA1P46020 1223 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 EXOSC10Q01780 885 aaKnown RBP7.47□□□□□ -1.21
SF3A3-208ENST00000489537 RASGRF1Q13972 1273 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 LARP1BQ659C4 914 aaKnown RBP7.47□□□□□ -1.21
SF3A3-208ENST00000489537 TRAF7Q6Q0C0 670 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 BICDL1Q6ZP65 573 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 FBXO33Q7Z6M2 555 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 SLC51AQ86UW1 340 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 SYNE4Q8N205 404 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 ANKLE1Q8NAG6 615 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 FAM184AQ8NB25 1140 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 TBC1D22AQ8WUA7 517 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 OSBP2Q969R2 916 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 SCAND2PQ9GZW5 306 aaPredicted RBP7.47□□□□□ -1.21
SF3A3-208ENST00000489537 ZNF287Q9HBT7 754 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 NMRK2Q9NPI5 230 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 SEC31BQ9NQW1 1179 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 DDX49Q9Y6V7 483 aaKnown RBP7.47□□□□□ -1.21
SF3A3-208ENST00000489537 ZNF532Q9HCE3 1301 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 SALL1Q9NSC2 1324 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 NRXN2Q9P2S2 1712 aa7.47□□□□□ -1.21
SF3A3-208ENST00000489537 DUOX1Q9NRD9 1551 aa7.46□□□□□ -1.21
SF3A3-208ENST00000489537 KLRG2A4D1S0 409 aaPredicted RBP7.46□□□□□ -1.22
SF3A3-208ENST00000489537 GOLGA6L3A6NEY3 463 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 E7EWF7 191 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 BAG3O95817 575 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 FGAP02671 866 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 SERPINB2P05120 415 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 PDE6BP35913 854 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 SLC19A1P41440 591 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 TGFB2P61812 414 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 RASSF7Q02833 373 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 ADCK5Q3MIX3 580 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 CRY2Q49AN0 593 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 NAA16Q6N069 864 aaPredicted RBP7.46□□□□□ -1.22
SF3A3-208ENST00000489537 Q6ZUG5 572 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 ARHGAP27Q6ZUM4 889 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 TMEM87AQ8NBN3 555 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 WASF1Q92558 559 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 GTF3C6Q969F1 213 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 EDC3Q96F86 508 aaKnown RBP7.46□□□□□ -1.22
SF3A3-208ENST00000489537 STRBPQ96SI9 672 aaKnown RBP7.46□□□□□ -1.22
SF3A3-208ENST00000489537 BRIP1Q9BX63 1249 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 ANKIB1Q9P2G1 1089 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 CFAP45Q9UL16 551 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 SUGT1Q9Y2Z0 365 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 ANKRD31Q8N7Z5 1873 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 ARAP2Q8WZ64 1704 aa7.46□□□□□ -1.22
SF3A3-208ENST00000489537 PCNTO95613 3336 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 MAGEB6P1A0A0J9YX57 407 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 H3BQV1 296 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 CPLX1O14810 134 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms