RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CXCL11O14625 94 aa30.39■■■□□ 2.46
HMGN1-217ENST00000489072 CAP1Q01518 475 aa30.39■■■□□ 2.46
HMGN1-217ENST00000489072 SP3Q02447 781 aa30.39■■■□□ 2.46
HMGN1-217ENST00000489072 RRP1BQ14684 758 aaKnown RBP30.39■■■□□ 2.46
HMGN1-217ENST00000489072 CCDC84Q86UT8 332 aaPredicted RBP30.39■■■□□ 2.46
HMGN1-217ENST00000489072 DHX36Q9H2U1 1008 aaKnown RBP30.39■■■□□ 2.46
HMGN1-217ENST00000489072 DCTPP1Q9H773 170 aa30.39■■■□□ 2.46
HMGN1-217ENST00000489072 HPS5Q9UPZ3 1129 aa30.39■■■□□ 2.46
HMGN1-217ENST00000489072 AFG3L2Q9Y4W6 797 aa30.39■■■□□ 2.46
HMGN1-217ENST00000489072 TMED8Q6PL24 325 aaPredicted RBP30.38■■■□□ 2.45
HMGN1-217ENST00000489072 ANKRD23Q86SG2 305 aa30.38■■■□□ 2.45
HMGN1-217ENST00000489072 ERO1AQ96HE7 468 aa30.38■■■□□ 2.45
HMGN1-217ENST00000489072 PI4KBQ9UBF8 816 aa30.38■■■□□ 2.45
HMGN1-217ENST00000489072 PCDHB15Q9Y5E8 787 aa30.38■■■□□ 2.45
HMGN1-217ENST00000489072 PDE6AP16499 860 aa30.37■■■□□ 2.45
HMGN1-217ENST00000489072 ATP5JP18859 108 aa30.37■■■□□ 2.45
HMGN1-217ENST00000489072 OTOP1Q7RTM1 612 aa30.37■■■□□ 2.45
HMGN1-217ENST00000489072 BOLA2Q9H3K6 86 aa30.37■■■□□ 2.45
HMGN1-217ENST00000489072 SAP30BPQ9UHR5 308 aaKnown RBP30.37■■■□□ 2.45
HMGN1-217ENST00000489072 HERC5Q9UII4 1024 aaKnown RBP30.37■■■□□ 2.45
HMGN1-217ENST00000489072 PALD1Q9ULE6 856 aa30.37■■■□□ 2.45
HMGN1-217ENST00000489072 FBXO46Q6PJ61 603 aaPredicted RBP30.36■■■□□ 2.45
HMGN1-217ENST00000489072 DNAJC18Q9H819 358 aa30.36■■■□□ 2.45
HMGN1-217ENST00000489072 TRIM17Q9Y577 477 aa30.36■■■□□ 2.45
HMGN1-217ENST00000489072 A0A0G2JLL6 359 aaPredicted RBP30.35■■■□□ 2.45
HMGN1-217ENST00000489072 PDHXO00330 501 aa30.35■■■□□ 2.45
HMGN1-217ENST00000489072 TLR2O60603 784 aa30.35■■■□□ 2.45
HMGN1-217ENST00000489072 SLC9C2Q5TAH2 1124 aa30.35■■■□□ 2.45
HMGN1-217ENST00000489072 GPAT2Q6NUI2 795 aa30.35■■■□□ 2.45
HMGN1-217ENST00000489072 PRRT2Q7Z6L0 340 aaPredicted RBP30.35■■■□□ 2.45
HMGN1-217ENST00000489072 CERS3Q8IU89 383 aa30.35■■■□□ 2.45
HMGN1-217ENST00000489072 RIOK1Q9BRS2 568 aaKnown RBP30.35■■■□□ 2.45
HMGN1-217ENST00000489072 CAP2P40123 477 aa30.34■■■□□ 2.45
HMGN1-217ENST00000489072 METTL16Q86W50 562 aaKnown RBP30.34■■■□□ 2.45
HMGN1-217ENST00000489072 PAG1Q9NWQ8 432 aa30.34■■■□□ 2.45
HMGN1-217ENST00000489072 ZSWIM8A7E2V4 1837 aa30.33■■■□□ 2.45
HMGN1-217ENST00000489072 TCRBV5S4A2TA0A5A2 114 aa30.33■■■□□ 2.45
HMGN1-217ENST00000489072 SLC4A8Q2Y0W8 1093 aa30.33■■■□□ 2.45
HMGN1-217ENST00000489072 HAUS7Q99871 368 aa30.33■■■□□ 2.45
HMGN1-217ENST00000489072 MYH7P12883 1935 aa30.32■■■□□ 2.44
HMGN1-217ENST00000489072 ZNF532Q9HCE3 1301 aa30.32■■■□□ 2.44
HMGN1-217ENST00000489072 TRIM75PA6NK02 468 aa30.32■■■□□ 2.44
HMGN1-217ENST00000489072 USP5P45974 858 aa30.32■■■□□ 2.44
HMGN1-217ENST00000489072 FOXP4Q8IVH2 680 aaPredicted RBP30.32■■■□□ 2.44
HMGN1-217ENST00000489072 CRBNQ96SW2 442 aa30.32■■■□□ 2.44
HMGN1-217ENST00000489072 DDX60LQ5H9U9 1706 aaKnown RBP30.32■■■□□ 2.44
HMGN1-217ENST00000489072 ADGRA2Q96PE1 1338 aa30.31■■■□□ 2.44
HMGN1-217ENST00000489072 MAGEB6P1A0A0J9YX57 407 aa30.31■■■□□ 2.44
HMGN1-217ENST00000489072 EFCC1Q9HA90 598 aa30.31■■■□□ 2.44
HMGN1-217ENST00000489072 NAV1Q8NEY1 1877 aa30.3■■■□□ 2.44
HMGN1-217ENST00000489072 JAG1P78504 1218 aa30.3■■■□□ 2.44
HMGN1-217ENST00000489072 GADL1Q6ZQY3 521 aa30.3■■■□□ 2.44
HMGN1-217ENST00000489072 FASTKD5Q7L8L6 764 aaKnown RBP30.3■■■□□ 2.44
HMGN1-217ENST00000489072 HLA-DOAP06340 250 aa30.29■■■□□ 2.44
HMGN1-217ENST00000489072 SLFNL1Q499Z3 407 aa30.29■■■□□ 2.44
HMGN1-217ENST00000489072 C17orf99Q6UX52 265 aa30.29■■■□□ 2.44
HMGN1-217ENST00000489072 CRACR2BQ8N4Y2 399 aaPredicted RBP30.29■■■□□ 2.44
HMGN1-217ENST00000489072 CPA4Q9UI42 421 aa30.29■■■□□ 2.44
HMGN1-217ENST00000489072 RGS19P49795 217 aa30.28■■■□□ 2.44
HMGN1-217ENST00000489072 SHROOM1Q2M3G4 852 aaPredicted RBP30.28■■■□□ 2.44
HMGN1-217ENST00000489072 PTPN22Q9Y2R2 807 aa30.28■■■□□ 2.44
HMGN1-217ENST00000489072 CYP2C8P10632 490 aa30.27■■■□□ 2.44
HMGN1-217ENST00000489072 ADD2P35612 726 aa30.27■■■□□ 2.44
HMGN1-217ENST00000489072 TRIM34Q9BYJ4 488 aa30.27■■■□□ 2.44
HMGN1-217ENST00000489072 ARHGAP39Q9C0H5 1083 aa30.27■■■□□ 2.44
HMGN1-217ENST00000489072 ECHDC1Q9NTX5 307 aa30.27■■■□□ 2.44
HMGN1-217ENST00000489072 LOC285556D6RIA3 1793 aa30.27■■■□□ 2.44
HMGN1-217ENST00000489072 CENPFP49454 3210 aa30.26■■■□□ 2.44
HMGN1-217ENST00000489072 USP17L5A8MUK1 530 aa30.26■■■□□ 2.43
HMGN1-217ENST00000489072 CHGBP05060 677 aa30.26■■■□□ 2.43
HMGN1-217ENST00000489072 SOX10P56693 466 aa30.26■■■□□ 2.43
HMGN1-217ENST00000489072 SPP2Q13103 211 aa30.26■■■□□ 2.43
HMGN1-217ENST00000489072 LCORLQ8N3X6 602 aa30.26■■■□□ 2.43
HMGN1-217ENST00000489072 ZNF280CQ8ND82 737 aa30.26■■■□□ 2.43
HMGN1-217ENST00000489072 GDF11O95390 407 aa30.25■■■□□ 2.43
HMGN1-217ENST00000489072 LACTBP83111 547 aaPredicted RBP30.25■■■□□ 2.43
HMGN1-217ENST00000489072 PARK7Q99497 189 aaKnown RBP30.25■■■□□ 2.43
HMGN1-217ENST00000489072 CRNKL1Q9BZJ0 848 aaKnown RBP30.25■■■□□ 2.43
HMGN1-217ENST00000489072 TSHZ3Q63HK5 1081 aa30.24■■■□□ 2.43
HMGN1-217ENST00000489072 TBC1D2Q9BYX2 928 aa30.24■■■□□ 2.43
HMGN1-217ENST00000489072 SLC45A1Q9Y2W3 748 aa30.24■■■□□ 2.43
HMGN1-217ENST00000489072 ASNSP08243 561 aa30.23■■■□□ 2.43
HMGN1-217ENST00000489072 TREML2Q5T2D2 321 aa30.23■■■□□ 2.43
HMGN1-217ENST00000489072 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.23■■■□□ 2.43
HMGN1-217ENST00000489072 EHD4Q9H223 541 aa30.23■■■□□ 2.43
HMGN1-217ENST00000489072 ARMT1Q9H993 441 aa30.23■■■□□ 2.43
HMGN1-217ENST00000489072 AGTPBP1Q9UPW5 1226 aa30.23■■■□□ 2.43
HMGN1-217ENST00000489072 CTGFP29279 349 aa30.22■■■□□ 2.43
HMGN1-217ENST00000489072 PLCD1P51178 756 aa30.22■■■□□ 2.43
HMGN1-217ENST00000489072 SDR42E1Q8WUS8 393 aa30.22■■■□□ 2.43
HMGN1-217ENST00000489072 SERPINB13Q9UIV8 391 aa30.22■■■□□ 2.43
HMGN1-217ENST00000489072 ZBTB21Q9ULJ3 1066 aa30.22■■■□□ 2.43
HMGN1-217ENST00000489072 BCRP11274 1271 aa30.21■■■□□ 2.43
HMGN1-217ENST00000489072 HMGCS2P54868 508 aa30.21■■■□□ 2.43
HMGN1-217ENST00000489072 EVX2Q03828 476 aa30.21■■■□□ 2.43
HMGN1-217ENST00000489072 ARHGEF6Q15052 776 aa30.21■■■□□ 2.43
HMGN1-217ENST00000489072 TATDN1Q6P1N9 297 aa30.21■■■□□ 2.43
HMGN1-217ENST00000489072 TTC6Q86TZ1 520 aa30.21■■■□□ 2.43
HMGN1-217ENST00000489072 PROCA1Q8NCQ7 364 aaPredicted RBP30.21■■■□□ 2.43
HMGN1-217ENST00000489072 WDR18Q9BV38 432 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms