RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 FASTKD5Q7L8L6 764 aaKnown RBP21.21■□□□□ 0.99
ATG3-205ENST00000488910 METTL16Q86W50 562 aaKnown RBP21.21■□□□□ 0.99
ATG3-205ENST00000488910 MIGA1Q8NAN2 632 aa21.21■□□□□ 0.99
ATG3-205ENST00000488910 BOLA2Q9H3K6 86 aa21.21■□□□□ 0.99
ATG3-205ENST00000488910 FOCADQ5VW36 1801 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 CDK5RAP2Q96SN8 1893 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 PDE6AP16499 860 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 CAP2P40123 477 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 USP5P45974 858 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 MOGSQ13724 837 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 ARHGEF6Q15052 776 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 HAUS7Q99871 368 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 TBC1D2Q9BYX2 928 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 PAG1Q9NWQ8 432 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 PCDHB15Q9Y5E8 787 aa21.2■□□□□ 0.98
ATG3-205ENST00000488910 A0A0G2JLL6 359 aaPredicted RBP21.19■□□□□ 0.98
ATG3-205ENST00000488910 FAM196BA6NMK8 535 aa21.19■□□□□ 0.98
ATG3-205ENST00000488910 PDHXO00330 501 aa21.19■□□□□ 0.98
ATG3-205ENST00000488910 SMARCA5O60264 1052 aaPredicted RBP21.19■□□□□ 0.98
ATG3-205ENST00000488910 HLA-DOAP06340 250 aa21.19■□□□□ 0.98
ATG3-205ENST00000488910 PRRT2Q7Z6L0 340 aaPredicted RBP21.19■□□□□ 0.98
ATG3-205ENST00000488910 PALD1Q9ULE6 856 aa21.19■□□□□ 0.98
ATG3-205ENST00000488910 DOCK1Q14185 1865 aa21.19■□□□□ 0.98
ATG3-205ENST00000488910 MAGEB6P1A0A0J9YX57 407 aa21.18■□□□□ 0.98
ATG3-205ENST00000488910 OTOP1Q7RTM1 612 aa21.18■□□□□ 0.98
ATG3-205ENST00000488910 CD99L2Q8TCZ2 262 aa21.18■□□□□ 0.98
ATG3-205ENST00000488910 RIOK1Q9BRS2 568 aaKnown RBP21.18■□□□□ 0.98
ATG3-205ENST00000488910 TRIM34Q9BYJ4 488 aa21.18■□□□□ 0.98
ATG3-205ENST00000488910 HPS5Q9UPZ3 1129 aa21.18■□□□□ 0.98
ATG3-205ENST00000488910 TRIM17Q9Y577 477 aa21.18■□□□□ 0.98
ATG3-205ENST00000488910 CRACR2BQ8N4Y2 399 aaPredicted RBP21.17■□□□□ 0.98
ATG3-205ENST00000488910 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.17■□□□□ 0.98
ATG3-205ENST00000488910 EFCC1Q9HA90 598 aa21.17■□□□□ 0.98
ATG3-205ENST00000488910 ECHDC1Q9NTX5 307 aa21.17■□□□□ 0.98
ATG3-205ENST00000488910 GINM1Q9NU53 330 aa21.17■□□□□ 0.98
ATG3-205ENST00000488910 SAP30BPQ9UHR5 308 aaKnown RBP21.17■□□□□ 0.98
ATG3-205ENST00000488910 ZNF532Q9HCE3 1301 aa21.17■□□□□ 0.98
ATG3-205ENST00000488910 TCRBV5S4A2TA0A5A2 114 aa21.16■□□□□ 0.98
ATG3-205ENST00000488910 GPAT2Q6NUI2 795 aa21.16■□□□□ 0.98
ATG3-205ENST00000488910 EDC3Q96F86 508 aaKnown RBP21.16■□□□□ 0.98
ATG3-205ENST00000488910 GPATCH3Q96I76 525 aa21.16■□□□□ 0.98
ATG3-205ENST00000488910 SLC45A1Q9Y2W3 748 aa21.16■□□□□ 0.98
ATG3-205ENST00000488910 USP17L5A8MUK1 530 aa21.15■□□□□ 0.98
ATG3-205ENST00000488910 RGS19P49795 217 aa21.15■□□□□ 0.98
ATG3-205ENST00000488910 RRP1BQ14684 758 aaKnown RBP21.15■□□□□ 0.98
ATG3-205ENST00000488910 C17orf99Q6UX52 265 aa21.15■□□□□ 0.98
ATG3-205ENST00000488910 TTC6Q86TZ1 520 aa21.15■□□□□ 0.98
ATG3-205ENST00000488910 ZNF280CQ8ND82 737 aa21.15■□□□□ 0.98
ATG3-205ENST00000488910 CRBNQ96SW2 442 aa21.15■□□□□ 0.98
ATG3-205ENST00000488910 CRNKL1Q9BZJ0 848 aaKnown RBP21.15■□□□□ 0.98
ATG3-205ENST00000488910 PHIPQ8WWQ0 1821 aa21.15■□□□□ 0.98
ATG3-205ENST00000488910 MYH1P12882 1939 aa21.14■□□□□ 0.98
ATG3-205ENST00000488910 TRIM75PA6NK02 468 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 ASNSP08243 561 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 ADD2P35612 726 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 AAMPQ13685 434 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 KIF22Q14807 665 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 ZSCAN25Q6NSZ9 544 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 GADL1Q6ZQY3 521 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 PARK7Q99497 189 aaKnown RBP21.14■□□□□ 0.97
ATG3-205ENST00000488910 EHD4Q9H223 541 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 DNAJC18Q9H819 358 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 AS3MTQ9HBK9 375 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.14■□□□□ 0.97
ATG3-205ENST00000488910 PTPN22Q9Y2R2 807 aa21.14■□□□□ 0.97
ATG3-205ENST00000488910 SIPA1L1O43166 1804 aa21.13■□□□□ 0.97
ATG3-205ENST00000488910 SPP2Q13103 211 aa21.13■□□□□ 0.97
ATG3-205ENST00000488910 UBE3CQ15386 1083 aa21.13■□□□□ 0.97
ATG3-205ENST00000488910 SERPINB13Q9UIV8 391 aa21.13■□□□□ 0.97
ATG3-205ENST00000488910 GNRH1P01148 92 aa21.12■□□□□ 0.97
ATG3-205ENST00000488910 LACTBP83111 547 aaPredicted RBP21.12■□□□□ 0.97
ATG3-205ENST00000488910 CCDC84Q86UT8 332 aaPredicted RBP21.12■□□□□ 0.97
ATG3-205ENST00000488910 PROCA1Q8NCQ7 364 aaPredicted RBP21.12■□□□□ 0.97
ATG3-205ENST00000488910 WDR18Q9BV38 432 aa21.12■□□□□ 0.97
ATG3-205ENST00000488910 PTPRFP10586 1907 aa21.12■□□□□ 0.97
ATG3-205ENST00000488910 ATAD5Q96QE3 1844 aa21.11■□□□□ 0.97
ATG3-205ENST00000488910 ADGRA2Q96PE1 1338 aa21.11■□□□□ 0.97
ATG3-205ENST00000488910 TATDN1Q6P1N9 297 aa21.11■□□□□ 0.97
ATG3-205ENST00000488910 CPA4Q9UI42 421 aa21.11■□□□□ 0.97
ATG3-205ENST00000488910 AGTPBP1Q9UPW5 1226 aa21.11■□□□□ 0.97
ATG3-205ENST00000488910 POLR3DP05423 398 aaPredicted RBP21.1■□□□□ 0.97
ATG3-205ENST00000488910 CAP1Q01518 475 aa21.1■□□□□ 0.97
ATG3-205ENST00000488910 SH3D19Q5HYK7 790 aa21.1■□□□□ 0.97
ATG3-205ENST00000488910 LCORLQ8N3X6 602 aa21.1■□□□□ 0.97
ATG3-205ENST00000488910 TTC41PQ6P2S7 1318 aa21.09■□□□□ 0.97
ATG3-205ENST00000488910 CYP2C8P10632 490 aa21.09■□□□□ 0.97
ATG3-205ENST00000488910 PABPC4Q13310 644 aaKnown RBP eCLIP21.09■□□□□ 0.97
ATG3-205ENST00000488910 HDAC1Q13547 482 aaPredicted RBP21.09■□□□□ 0.97
ATG3-205ENST00000488910 SLC4A8Q2Y0W8 1093 aa21.09■□□□□ 0.97
ATG3-205ENST00000488910 DCP1AQ9NPI6 582 aaPredicted RBP21.09■□□□□ 0.97
ATG3-205ENST00000488910 ATP8A2Q9NTI2 1148 aa21.09■□□□□ 0.97
ATG3-205ENST00000488910 MCM9Q9NXL9 1143 aa21.09■□□□□ 0.97
ATG3-205ENST00000488910 PNMA3Q9UL41 463 aa21.09■□□□□ 0.97
ATG3-205ENST00000488910 TAOK2Q9UL54 1235 aa21.09■□□□□ 0.97
ATG3-205ENST00000488910 C19orf81C9J6K1 198 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 GDF11O95390 407 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 BCRP11274 1271 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 PLCD1P51178 756 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 HMGCS2P54868 508 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 PRMT2P55345 433 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms