RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 BLOC1S2Q6QNY1 142 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 CRACR2BQ8N4Y2 399 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-242ENST00000488013 TRPM4Q8TD43 1214 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 CCDC17Q96LX7 622 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 DEFB129Q9H1M3 183 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 MKNK2Q9HBH9 465 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 DDX4Q9NQI0 724 aaKnown RBP13.06□□□□□ -0.32
HDLBP-242ENST00000488013 PALD1Q9ULE6 856 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 PCDHAC2Q9Y5I4 1007 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 WDR19Q8NEZ3 1342 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 ROBO3Q96MS0 1386 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 CHD4Q14839 1912 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 UTRNP46939 3433 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 SHTN1A0MZ66 631 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 E7EWF7 191 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 MCM5P33992 734 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 HAND2P61296 217 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 SART3Q15020 963 aaKnown RBP13.05□□□□□ -0.32
HDLBP-242ENST00000488013 ANKRD1Q15327 319 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 DCAF15Q66K64 600 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 C16orf86Q6ZW13 317 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 DHX32Q7L7V1 743 aaKnown RBP13.05□□□□□ -0.32
HDLBP-242ENST00000488013 METTL16Q86W50 562 aaKnown RBP13.05□□□□□ -0.32
HDLBP-242ENST00000488013 RASEFQ8IZ41 740 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 ZNF444Q8N0Y2 327 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-242ENST00000488013 JAKMIP1Q96N16 626 aaKnown RBP13.05□□□□□ -0.32
HDLBP-242ENST00000488013 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 GGA3Q9NZ52 723 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
HDLBP-242ENST00000488013 MYH13Q9UKX3 1938 aa13.05□□□□□ -0.32
HDLBP-242ENST00000488013 EGFRP00533 1210 aa13.04□□□□□ -0.32
HDLBP-242ENST00000488013 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-242ENST00000488013 CACNB3P54284 484 aa13.04□□□□□ -0.32
HDLBP-242ENST00000488013 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
HDLBP-242ENST00000488013 CDC37L1Q7L3B6 337 aa13.04□□□□□ -0.32
HDLBP-242ENST00000488013 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
HDLBP-242ENST00000488013 TMTC2Q8N394 836 aa13.04□□□□□ -0.32
HDLBP-242ENST00000488013 CHMP4CQ96CF2 233 aa13.04□□□□□ -0.32
HDLBP-242ENST00000488013 GINM1Q9NU53 330 aa13.04□□□□□ -0.32
HDLBP-242ENST00000488013 PSME4Q14997 1843 aa13.04□□□□□ -0.32
HDLBP-242ENST00000488013 ERICH2A1L162 156 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 CASTP20810 708 aaKnown RBP13.03□□□□□ -0.32
HDLBP-242ENST00000488013 NF2P35240 595 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 ANP32AP39687 249 aaKnown RBP13.03□□□□□ -0.32
HDLBP-242ENST00000488013 PLCD1P51178 756 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 MAP3K10Q02779 954 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 GABPAQ06546 454 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 TBC1D10CQ8IV04 446 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 FBXL16Q8N461 479 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 TMEM87BQ96K49 555 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 ALDH8A1Q9H2A2 487 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-242ENST00000488013 TOMM22Q9NS69 142 aa13.03□□□□□ -0.32
HDLBP-242ENST00000488013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDLBP-242ENST00000488013 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
HDLBP-242ENST00000488013 AK9Q5TCS8 1911 aa13.02□□□□□ -0.32
HDLBP-242ENST00000488013 DDTLA6NHG4 134 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-242ENST00000488013 RPS6KB1P23443 525 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 CDK8P49336 464 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 NEK4P51957 841 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 FGD1P98174 961 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-242ENST00000488013 KRT26Q7Z3Y9 468 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 TCP11L1Q9NUJ3 509 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 CNTNAP1P78357 1384 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 CCDC88AQ3V6T2 1871 aa13.02□□□□□ -0.33
HDLBP-242ENST00000488013 CYP2D7A0A087X1C5 515 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 TSPY2A6NKD2 308 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 POTECB2RU33 542 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
HDLBP-242ENST00000488013 TSPY3P0CV98 308 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 TSPY8P0CW00 308 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 CYP2D6P10635 497 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 BECN1Q14457 450 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 SH3BP5LQ7L8J4 393 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 ZFPM1Q8IX07 1006 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 TTC14Q96N46 770 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 KIF2CQ99661 725 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 TMEM39BQ9GZU3 492 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.01□□□□□ -0.33
HDLBP-242ENST00000488013 RRAGCQ9HB90 399 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 PDRG1Q9NUG6 133 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 SBF1O95248 1867 aa13.01□□□□□ -0.33
HDLBP-242ENST00000488013 PPP1R12BO60237 982 aaPredicted RBP13□□□□□ -0.33
HDLBP-242ENST00000488013 KDM4AO75164 1064 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 EXOSC10Q01780 885 aaKnown RBP13□□□□□ -0.33
HDLBP-242ENST00000488013 ADCK5Q3MIX3 580 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 CERKLQ49MI3 558 aaPredicted RBP13□□□□□ -0.33
HDLBP-242ENST00000488013 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
HDLBP-242ENST00000488013 TATDN1Q6P1N9 297 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 STOX1Q6ZVD7 989 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 MB21D2Q8IYB1 491 aaPredicted RBP13□□□□□ -0.33
HDLBP-242ENST00000488013 SNX21Q969T3 373 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 TEPSINQ96N21 525 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 ZNF341Q9BYN7 854 aa13□□□□□ -0.33
HDLBP-242ENST00000488013 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms