RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 NECAB3Q96P71 396 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-211ENST00000486519 DDX4Q9NQI0 724 aaKnown RBP19.25■□□□□ 0.67
U2AF1-211ENST00000486519 MORF4L1Q9UBU8 362 aa19.25■□□□□ 0.67
U2AF1-211ENST00000486519 EPHB4P54760 987 aa19.24■□□□□ 0.67
U2AF1-211ENST00000486519 HMGCS2P54868 508 aa19.24■□□□□ 0.67
U2AF1-211ENST00000486519 SPP2Q13103 211 aa19.24■□□□□ 0.67
U2AF1-211ENST00000486519 CAVIN4Q5BKX8 364 aa19.24■□□□□ 0.67
U2AF1-211ENST00000486519 POTEEQ6S8J3 1075 aa19.24■□□□□ 0.67
U2AF1-211ENST00000486519 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
U2AF1-211ENST00000486519 ATP11BQ9Y2G3 1177 aa19.24■□□□□ 0.67
U2AF1-211ENST00000486519 LRRFIP2Q9Y608 721 aaKnown RBP19.24■□□□□ 0.67
U2AF1-211ENST00000486519 MROH5Q6ZUA9 1318 aa19.24■□□□□ 0.67
U2AF1-211ENST00000486519 GRM8O00222 908 aa19.23■□□□□ 0.67
U2AF1-211ENST00000486519 CTNND1O60716 968 aaKnown RBP19.23■□□□□ 0.67
U2AF1-211ENST00000486519 XRCC5P13010 732 aaKnown RBP19.23■□□□□ 0.67
U2AF1-211ENST00000486519 RRP1BQ14684 758 aaKnown RBP19.23■□□□□ 0.67
U2AF1-211ENST00000486519 PROCA1Q8NCQ7 364 aaPredicted RBP19.23■□□□□ 0.67
U2AF1-211ENST00000486519 NUDT12Q9BQG2 462 aa19.23■□□□□ 0.67
U2AF1-211ENST00000486519 PRDM5Q9NQX1 630 aaPredicted RBP19.23■□□□□ 0.67
U2AF1-211ENST00000486519 FLRT1Q9NZU1 646 aa19.23■□□□□ 0.67
U2AF1-211ENST00000486519 REV3LO60673 3130 aa19.23■□□□□ 0.67
U2AF1-211ENST00000486519 NCOR1O75376 2440 aa19.22■□□□□ 0.67
U2AF1-211ENST00000486519 ITGB8P26012 769 aa19.22■□□□□ 0.67
U2AF1-211ENST00000486519 Q3C1V9 767 aa19.22■□□□□ 0.67
U2AF1-211ENST00000486519 METTL24Q5JXM2 366 aa19.22■□□□□ 0.67
U2AF1-211ENST00000486519 KLHDC4Q8TBB5 520 aa19.22■□□□□ 0.67
U2AF1-211ENST00000486519 ASB2Q96Q27 587 aa19.22■□□□□ 0.67
U2AF1-211ENST00000486519 PORCNQ9H237 461 aa19.22■□□□□ 0.67
U2AF1-211ENST00000486519 TRIM43BA6NCK2 446 aa19.21■□□□□ 0.67
U2AF1-211ENST00000486519 RALBP1Q15311 655 aa19.21■□□□□ 0.67
U2AF1-211ENST00000486519 ZSCAN29Q8IWY8 852 aaPredicted RBP19.21■□□□□ 0.67
U2AF1-211ENST00000486519 TRIM43Q96BQ3 446 aaPredicted RBP19.21■□□□□ 0.67
U2AF1-211ENST00000486519 UHRF1Q96T88 793 aaPredicted RBP19.21■□□□□ 0.67
U2AF1-211ENST00000486519 PRKAG2Q9UGJ0 569 aa19.21■□□□□ 0.67
U2AF1-211ENST00000486519 SYNGAP1Q96PV0 1343 aa19.21■□□□□ 0.67
U2AF1-211ENST00000486519 PLXNA1Q9UIW2 1896 aa19.2■□□□□ 0.66
U2AF1-211ENST00000486519 BDP1A6H8Y1 2624 aa19.2■□□□□ 0.66
U2AF1-211ENST00000486519 PDE8BO95263 885 aa19.2■□□□□ 0.66
U2AF1-211ENST00000486519 FGFR2P21802 821 aa19.2■□□□□ 0.66
U2AF1-211ENST00000486519 CALD1Q05682 793 aaKnown RBP19.2■□□□□ 0.66
U2AF1-211ENST00000486519 MORN1Q5T089 497 aa19.2■□□□□ 0.66
U2AF1-211ENST00000486519 P2RX7Q99572 595 aaKnown RBP19.2■□□□□ 0.66
U2AF1-211ENST00000486519 CHMP4AQ9BY43 222 aa19.2■□□□□ 0.66
U2AF1-211ENST00000486519 PDE3AQ14432 1141 aa19.19■□□□□ 0.66
U2AF1-211ENST00000486519 TRIM60Q495X7 471 aa19.19■□□□□ 0.66
U2AF1-211ENST00000486519 SOCS4Q8WXH5 440 aa19.19■□□□□ 0.66
U2AF1-211ENST00000486519 IDI2Q9BXS1 227 aa19.19■□□□□ 0.66
U2AF1-211ENST00000486519 PDLIM7Q9NR12 457 aa19.19■□□□□ 0.66
U2AF1-211ENST00000486519 MYBBP1AQ9BQG0 1328 aaKnown RBP19.19■□□□□ 0.66
U2AF1-211ENST00000486519 MYO9BQ13459 2157 aa19.19■□□□□ 0.66
U2AF1-211ENST00000486519 SIPA1L1O43166 1804 aa19.18■□□□□ 0.66
U2AF1-211ENST00000486519 ENTPD3O75355 529 aa19.18■□□□□ 0.66
U2AF1-211ENST00000486519 GJC2Q5T442 439 aaPredicted RBP19.18■□□□□ 0.66
U2AF1-211ENST00000486519 TRPV1Q8NER1 839 aa19.18■□□□□ 0.66
U2AF1-211ENST00000486519 ATXN2LQ8WWM7 1075 aaKnown RBP19.18■□□□□ 0.66
U2AF1-211ENST00000486519 THEGQ9P2T0 379 aa19.18■□□□□ 0.66
U2AF1-211ENST00000486519 RBPJLQ9UBG7 517 aa19.18■□□□□ 0.66
U2AF1-211ENST00000486519 NDUFB9Q9Y6M9 179 aa19.18■□□□□ 0.66
U2AF1-211ENST00000486519 DNAJB2P25686 324 aa19.17■□□□□ 0.66
U2AF1-211ENST00000486519 PICALMQ13492 652 aa19.17■□□□□ 0.66
U2AF1-211ENST00000486519 SLC39A5Q6ZMH5 540 aa19.17■□□□□ 0.66
U2AF1-211ENST00000486519 GPR142Q7Z601 462 aa19.17■□□□□ 0.66
U2AF1-211ENST00000486519 ZNF280CQ8ND82 737 aa19.17■□□□□ 0.66
U2AF1-211ENST00000486519 WDR66Q8TBY9 1149 aa19.17■□□□□ 0.66
U2AF1-211ENST00000486519 RNPC3Q96LT9 517 aaKnown RBP19.17■□□□□ 0.66
U2AF1-211ENST00000486519 DDX20Q9UHI6 824 aaKnown RBP19.17■□□□□ 0.66
U2AF1-211ENST00000486519 APBA2Q99767 749 aa19.16■□□□□ 0.66
U2AF1-211ENST00000486519 ZNF576Q9H609 170 aa19.16■□□□□ 0.66
U2AF1-211ENST00000486519 XIRP2A4UGR9 3374 aa19.16■□□□□ 0.66
U2AF1-211ENST00000486519 DNM1LO00429 736 aa19.15■□□□□ 0.66
U2AF1-211ENST00000486519 NBPF7P0C2Y1 421 aaPredicted RBP19.15■□□□□ 0.66
U2AF1-211ENST00000486519 RGS2P41220 211 aa19.15■□□□□ 0.66
U2AF1-211ENST00000486519 HERVK_113P62684 666 aa19.15■□□□□ 0.66
U2AF1-211ENST00000486519 ADGRE1Q14246 886 aa19.15■□□□□ 0.66
U2AF1-211ENST00000486519 CCDC85BQ15834 202 aaPredicted RBP19.15■□□□□ 0.66
U2AF1-211ENST00000486519 SHROOM1Q2M3G4 852 aaPredicted RBP19.15■□□□□ 0.66
U2AF1-211ENST00000486519 SH3D19Q5HYK7 790 aa19.15■□□□□ 0.66
U2AF1-211ENST00000486519 ANO1Q5XXA6 986 aa19.15■□□□□ 0.66
U2AF1-211ENST00000486519 ANKRD44Q8N8A2 993 aa19.15■□□□□ 0.66
U2AF1-211ENST00000486519 GPRC5AQ8NFJ5 357 aa19.15■□□□□ 0.66
U2AF1-211ENST00000486519 LPAR1Q92633 364 aa19.15■□□□□ 0.66
U2AF1-211ENST00000486519 BICC1Q9H694 974 aaKnown RBP19.15■□□□□ 0.66
U2AF1-211ENST00000486519 LDHBP07195 334 aaKnown RBP19.14■□□□□ 0.65
U2AF1-211ENST00000486519 ZEB1P37275 1124 aaPredicted RBP19.14■□□□□ 0.65
U2AF1-211ENST00000486519 JAG1P78504 1218 aa19.14■□□□□ 0.65
U2AF1-211ENST00000486519 TRMT44Q8IYL2 757 aaKnown RBP19.14■□□□□ 0.65
U2AF1-211ENST00000486519 C9orf78Q9NZ63 289 aaPredicted RBP19.14■□□□□ 0.65
U2AF1-211ENST00000486519 GAKO14976 1311 aa19.14■□□□□ 0.65
U2AF1-211ENST00000486519 CHD9Q3L8U1 2897 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 CNGA1P29973 690 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 PBX2P40425 430 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 ERVK-9P63128 1117 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 ERVK-24P63145 666 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 IRX3P78415 501 aaPredicted RBP19.13■□□□□ 0.65
U2AF1-211ENST00000486519 PABPC4Q13310 644 aaKnown RBP eCLIP19.13■□□□□ 0.65
U2AF1-211ENST00000486519 MTMR2Q13614 643 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 SNX17Q15036 470 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 LRFN3Q9BTN0 628 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 PRDM12Q9H4Q4 367 aa19.13■□□□□ 0.65
U2AF1-211ENST00000486519 EPHX3Q9H6B9 360 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms