RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 PROCA1Q8NCQ7 364 aaPredicted RBP9.09□□□□□ -0.95
CPNE1-226ENST00000486021 SMCR8Q8TEV9 937 aaPredicted RBP9.09□□□□□ -0.95
CPNE1-226ENST00000486021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.09□□□□□ -0.95
CPNE1-226ENST00000486021 GTF3C2Q8WUA4 911 aaPredicted RBP9.09□□□□□ -0.95
CPNE1-226ENST00000486021 GPATCH3Q96I76 525 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.09□□□□□ -0.952e-7■■■■□ 22.1
CPNE1-226ENST00000486021 AATFQ9NY61 560 aaKnown RBP eCLIP9.09□□□□□ -0.95
CPNE1-226ENST00000486021 TMOD4Q9NZQ9 345 aa9.09□□□□□ -0.95
CPNE1-226ENST00000486021 A0A0G2JLL6 359 aaPredicted RBP9.08□□□□□ -0.96
CPNE1-226ENST00000486021 IDH1O75874 414 aaKnown RBP9.08□□□□□ -0.96
CPNE1-226ENST00000486021 GCLCP48506 637 aaPredicted RBP9.08□□□□□ -0.96
CPNE1-226ENST00000486021 SOX10P56693 466 aa9.08□□□□□ -0.96
CPNE1-226ENST00000486021 PRRT2Q7Z6L0 340 aaPredicted RBP9.08□□□□□ -0.96
CPNE1-226ENST00000486021 AACSQ86V21 672 aa9.08□□□□□ -0.96
CPNE1-226ENST00000486021 RHPN1Q8TCX5 695 aa9.08□□□□□ -0.96
CPNE1-226ENST00000486021 RAET1EQ8TD07 263 aa9.08□□□□□ -0.96
CPNE1-226ENST00000486021 DBNDD2Q9BQY9 259 aa9.08□□□□□ -0.96
CPNE1-226ENST00000486021 CABP5Q9NP86 173 aa9.08□□□□□ -0.96
CPNE1-226ENST00000486021 AFG3L2Q9Y4W6 797 aa9.08□□□□□ -0.96
CPNE1-226ENST00000486021 LOC285556D6RIA3 1793 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 NAV1Q8NEY1 1877 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 DDTLA6NHG4 134 aaPredicted RBP9.07□□□□□ -0.96
CPNE1-226ENST00000486021 PHF20L1A8MW92 1017 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 CYP7A1P22680 504 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 CAP2P40123 477 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 ZAP70P43403 619 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 PSMC4P43686 418 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 RHBDL3P58872 404 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 C17orf99Q6UX52 265 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 TBC1D9Q6ZT07 1266 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 CCAR1Q8IX12 1150 aaKnown RBP9.07□□□□□ -0.96
CPNE1-226ENST00000486021 ZNF280CQ8ND82 737 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 TGFBRAP1Q8WUH2 860 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 CNKSR2Q8WXI2 1034 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 COA7Q96BR5 231 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 ARMC5Q96C12 935 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 CCDC8Q9H0W5 538 aaPredicted RBP9.07□□□□□ -0.96
CPNE1-226ENST00000486021 C1orf115Q9H7X2 142 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 AGTPBP1Q9UPW5 1226 aa9.07□□□□□ -0.96
CPNE1-226ENST00000486021 CYP2E1P05181 493 aaPredicted RBP9.06□□□□□ -0.96
CPNE1-226ENST00000486021 USP14P54578 494 aa9.06□□□□□ -0.96
CPNE1-226ENST00000486021 CDAN1Q8IWY9 1227 aa9.06□□□□□ -0.96
CPNE1-226ENST00000486021 PANK1Q8TE04 598 aa9.06□□□□□ -0.96
CPNE1-226ENST00000486021 CRNKL1Q9BZJ0 848 aaKnown RBP9.06□□□□□ -0.96
CPNE1-226ENST00000486021 R3HDMLQ9H3Y0 253 aa9.06□□□□□ -0.96
CPNE1-226ENST00000486021 SNRKQ9NRH2 765 aa9.06□□□□□ -0.96
CPNE1-226ENST00000486021 BIN2Q9UBW5 565 aaPredicted RBP9.06□□□□□ -0.96
CPNE1-226ENST00000486021 TNNQ9UQP3 1299 aa9.06□□□□□ -0.96
CPNE1-226ENST00000486021 EXOC6BQ9Y2D4 811 aa9.06□□□□□ -0.96
CPNE1-226ENST00000486021 RFX7Q2KHR2 1363 aa9.06□□□□□ -0.96
CPNE1-226ENST00000486021 MYPNQ86TC9 1320 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 MAGEB6P1A0A0J9YX57 407 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 TRIM75PA6NK02 468 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 USP17L10C9JJH3 530 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 POLR3DP05423 398 aaPredicted RBP9.05□□□□□ -0.96
CPNE1-226ENST00000486021 RLBP1P12271 317 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 GRK4P32298 578 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 IRX3P78415 501 aaPredicted RBP9.05□□□□□ -0.96
CPNE1-226ENST00000486021 PRPF38BQ5VTL8 546 aaKnown RBP9.05□□□□□ -0.96
CPNE1-226ENST00000486021 MAGEB6Q8N7X4 407 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 SH3RF3Q8TEJ3 882 aaPredicted RBP9.05□□□□□ -0.96
CPNE1-226ENST00000486021 EAF2Q96CJ1 260 aaPredicted RBP9.05□□□□□ -0.96
CPNE1-226ENST00000486021 WDR18Q9BV38 432 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 LRRCC1Q9C099 1032 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 CWC22Q9HCG8 908 aaKnown RBP9.05□□□□□ -0.96
CPNE1-226ENST00000486021 DDX4Q9NQI0 724 aaKnown RBP9.05□□□□□ -0.96
CPNE1-226ENST00000486021 ZBTB40Q9NUA8 1239 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 SRRDQ9UH36 339 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 SERPINB13Q9UIV8 391 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 DBNLQ9UJU6 430 aaKnown RBP9.05□□□□□ -0.96
CPNE1-226ENST00000486021 COG6Q9Y2V7 657 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 FLT1P17948 1338 aa9.05□□□□□ -0.96
CPNE1-226ENST00000486021 TNPO2O14787 897 aaKnown RBP9.04□□□□□ -0.96
CPNE1-226ENST00000486021 GLRX3O76003 335 aaKnown RBP9.04□□□□□ -0.96
CPNE1-226ENST00000486021 SPP2Q13103 211 aa9.04□□□□□ -0.96
CPNE1-226ENST00000486021 FAM110CQ1W6H9 321 aa9.04□□□□□ -0.96
CPNE1-226ENST00000486021 SH3D19Q5HYK7 790 aa9.04□□□□□ -0.96
CPNE1-226ENST00000486021 SLC9C2Q5TAH2 1124 aa9.04□□□□□ -0.96
CPNE1-226ENST00000486021 PI16Q6UXB8 463 aa9.04□□□□□ -0.96
CPNE1-226ENST00000486021 MAPKAPK5Q8IW41 473 aa9.04□□□□□ -0.96
CPNE1-226ENST00000486021 ZFPM1Q8IX07 1006 aa9.04□□□□□ -0.96
CPNE1-226ENST00000486021 TRMT44Q8IYL2 757 aaKnown RBP9.04□□□□□ -0.96
CPNE1-226ENST00000486021 EHD4Q9H223 541 aa9.04□□□□□ -0.96
CPNE1-226ENST00000486021 CPA4Q9UI42 421 aa9.04□□□□□ -0.96
CPNE1-226ENST00000486021 BACE1P56817 501 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 CCNA1P78396 465 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 AAMPQ13685 434 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 CERKLQ49MI3 558 aaPredicted RBP9.03□□□□□ -0.96
CPNE1-226ENST00000486021 USP17L2Q6R6M4 530 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 SH3BP5LQ7L8J4 393 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 METTL16Q86W50 562 aaKnown RBP9.03□□□□□ -0.96
CPNE1-226ENST00000486021 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 ZNF333Q96JL9 665 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 DNAJC2Q99543 621 aaKnown RBP9.03□□□□□ -0.96
CPNE1-226ENST00000486021 FEZ1Q99689 392 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 HTATIP2Q9BUP3 242 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 SH2D4AQ9H788 454 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 ZNF287Q9HBT7 754 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms