RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, human

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH3-208	ENST00000482460	TTF1	Q15361	905 aa	Predicted RBP	27.67	■■■□□ 2.02
CYTH3-208	ENST00000482460	CERS3	Q8IU89	383 aa		27.67	■■■□□ 2.02
CYTH3-208	ENST00000482460	MAPKAPK5	Q8IW41	473 aa		27.67	■■■□□ 2.02
CYTH3-208	ENST00000482460	MAGEB6	Q8N7X4	407 aa		27.67	■■■□□ 2.02
CYTH3-208	ENST00000482460	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	27.67	■■■□□ 2.02
CYTH3-208	ENST00000482460	PTPN22	Q9Y2R2	807 aa		27.67	■■■□□ 2.02
CYTH3-208	ENST00000482460	PHIP	Q8WWQ0	1821 aa		27.67	■■■□□ 2.02
CYTH3-208	ENST00000482460	FLT1	P17948	1338 aa		27.67	■■■□□ 2.02
CYTH3-208	ENST00000482460		A0A0G2JLL6	359 aa	Predicted RBP	27.66	■■■□□ 2.02
CYTH3-208	ENST00000482460	GPAT2	Q6NUI2	795 aa		27.66	■■■□□ 2.02
CYTH3-208	ENST00000482460	FASTKD5	Q7L8L6	764 aa	Known RBP	27.66	■■■□□ 2.02
CYTH3-208	ENST00000482460	PRRT2	Q7Z6L0	340 aa	Predicted RBP	27.66	■■■□□ 2.02
CYTH3-208	ENST00000482460	C17orf99	Q6UX52	265 aa		27.65	■■■□□ 2.02
CYTH3-208	ENST00000482460	CAP2	P40123	477 aa		27.64	■■■□□ 2.02
CYTH3-208	ENST00000482460	FOXP4	Q8IVH2	680 aa	Predicted RBP	27.64	■■■□□ 2.02
CYTH3-208	ENST00000482460	MIGA1	Q8NAN2	632 aa		27.64	■■■□□ 2.02
CYTH3-208	ENST00000482460	BCL11A	Q9H165	835 aa		27.64	■■■□□ 2.02
CYTH3-208	ENST00000482460	PTPRF	P10586	1907 aa		27.63	■■■□□ 2.01
CYTH3-208	ENST00000482460	KIF22	Q14807	665 aa		27.63	■■■□□ 2.01
CYTH3-208	ENST00000482460	METTL16	Q86W50	562 aa	Known RBP	27.63	■■■□□ 2.01
CYTH3-208	ENST00000482460	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	27.63	■■■□□ 2.01
CYTH3-208	ENST00000482460	PALD1	Q9ULE6	856 aa		27.63	■■■□□ 2.01
CYTH3-208	ENST00000482460	SIPA1L1	O43166	1804 aa		27.62	■■■□□ 2.01
CYTH3-208	ENST00000482460	TRIM75P	A6NK02	468 aa		27.62	■■■□□ 2.01
CYTH3-208	ENST00000482460	LACTB	P83111	547 aa	Predicted RBP	27.62	■■■□□ 2.01
CYTH3-208	ENST00000482460	RRP1B	Q14684	758 aa	Known RBP	27.62	■■■□□ 2.01
CYTH3-208	ENST00000482460	TBC1D2	Q9BYX2	928 aa		27.62	■■■□□ 2.01
CYTH3-208	ENST00000482460	CPA4	Q9UI42	421 aa		27.62	■■■□□ 2.01
CYTH3-208	ENST00000482460	ATAD5	Q96QE3	1844 aa		27.62	■■■□□ 2.01
CYTH3-208	ENST00000482460	GADL1	Q6ZQY3	521 aa		27.61	■■■□□ 2.01
CYTH3-208	ENST00000482460	CCDC84	Q86UT8	332 aa	Predicted RBP	27.61	■■■□□ 2.01
CYTH3-208	ENST00000482460	PARK7	Q99497	189 aa	Known RBP	27.61	■■■□□ 2.01
CYTH3-208	ENST00000482460	LRRCC1	Q9C099	1032 aa		27.61	■■■□□ 2.01
CYTH3-208	ENST00000482460	ADGRA2	Q96PE1	1338 aa		27.61	■■■□□ 2.01
CYTH3-208	ENST00000482460	DNAJC2	Q99543	621 aa	Known RBP	27.6	■■■□□ 2.01
CYTH3-208	ENST00000482460	SAP30BP	Q9UHR5	308 aa	Known RBP	27.6	■■■□□ 2.01
CYTH3-208	ENST00000482460	SLC45A1	Q9Y2W3	748 aa		27.6	■■■□□ 2.01
CYTH3-208	ENST00000482460	HTT	P42858	3142 aa		27.6	■■■□□ 2.01
CYTH3-208	ENST00000482460	MYH1	P12882	1939 aa		27.59	■■■□□ 2.01
CYTH3-208	ENST00000482460	GOLIM4	O00461	696 aa		27.59	■■■□□ 2.01
CYTH3-208	ENST00000482460	HLA-DOA	P06340	250 aa		27.59	■■■□□ 2.01
CYTH3-208	ENST00000482460	ATP5J	P18859	108 aa		27.59	■■■□□ 2.01
CYTH3-208	ENST00000482460	USP5	P45974	858 aa		27.59	■■■□□ 2.01
CYTH3-208	ENST00000482460	SLC9C2	Q5TAH2	1124 aa		27.59	■■■□□ 2.01
CYTH3-208	ENST00000482460	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	27.59	■■■□□ 2.01
CYTH3-208	ENST00000482460	TRIM34	Q9BYJ4	488 aa		27.59	■■■□□ 2.01
CYTH3-208	ENST00000482460	ARHGAP39	Q9C0H5	1083 aa		27.59	■■■□□ 2.01
CYTH3-208	ENST00000482460	USP17L5	A8MUK1	530 aa		27.58	■■■□□ 2.01
CYTH3-208	ENST00000482460	GNRH1	P01148	92 aa		27.58	■■■□□ 2.01
CYTH3-208	ENST00000482460	CYP2C8	P10632	490 aa		27.58	■■■□□ 2.01
CYTH3-208	ENST00000482460	SPP2	Q13103	211 aa		27.58	■■■□□ 2.01
CYTH3-208	ENST00000482460	ZNF280C	Q8ND82	737 aa		27.58	■■■□□ 2.01
CYTH3-208	ENST00000482460	DNAJC18	Q9H819	358 aa		27.58	■■■□□ 2.01
CYTH3-208	ENST00000482460	PDE6A	P16499	860 aa		27.57	■■■□□ 2
CYTH3-208	ENST00000482460	RIOK1	Q9BRS2	568 aa	Known RBP	27.57	■■■□□ 2
CYTH3-208	ENST00000482460	BOLA2	Q9H3K6	86 aa		27.57	■■■□□ 2
CYTH3-208	ENST00000482460	MAGEB6P1	A0A0J9YX57	407 aa		27.56	■■■□□ 2
CYTH3-208	ENST00000482460	ASNS	P08243	561 aa		27.56	■■■□□ 2
CYTH3-208	ENST00000482460	PROCA1	Q8NCQ7	364 aa	Predicted RBP	27.56	■■■□□ 2
CYTH3-208	ENST00000482460	AS3MT	Q9HBK9	375 aa		27.56	■■■□□ 2
CYTH3-208	ENST00000482460	PAG1	Q9NWQ8	432 aa		27.56	■■■□□ 2
CYTH3-208	ENST00000482460	AGTPBP1	Q9UPW5	1226 aa		27.56	■■■□□ 2
CYTH3-208	ENST00000482460	ZSWIM8	A7E2V4	1837 aa		27.55	■■■□□ 2
CYTH3-208	ENST00000482460	SMARCA5	O60264	1052 aa	Predicted RBP	27.55	■■■□□ 2
CYTH3-208	ENST00000482460	BCR	P11274	1271 aa		27.55	■■■□□ 2
CYTH3-208	ENST00000482460	ARMC5	Q96C12	935 aa		27.55	■■■□□ 2
CYTH3-208	ENST00000482460	EDC3	Q96F86	508 aa	Known RBP	27.55	■■■□□ 2
CYTH3-208	ENST00000482460	DCTPP1	Q9H773	170 aa		27.55	■■■□□ 2
CYTH3-208	ENST00000482460	GINM1	Q9NU53	330 aa		27.55	■■■□□ 2
CYTH3-208	ENST00000482460	PTCH2	Q9Y6C5	1203 aa		27.55	■■■□□ 2
CYTH3-208	ENST00000482460	PSMC4	P43686	418 aa		27.54	■■■□□ 2
CYTH3-208	ENST00000482460	PRMT2	P55345	433 aa		27.54	■■■□□ 2
CYTH3-208	ENST00000482460	HAUS7	Q99871	368 aa		27.54	■■■□□ 2
CYTH3-208	ENST00000482460	WDR18	Q9BV38	432 aa		27.54	■■■□□ 2
CYTH3-208	ENST00000482460	ZNF532	Q9HCE3	1301 aa		27.54	■■■□□ 2
CYTH3-208	ENST00000482460	TCRBV5S4A2T	A0A5A2	114 aa		27.53	■■■□□ 2
CYTH3-208	ENST00000482460	SLC4A8	Q2Y0W8	1093 aa		27.53	■■■□□ 2
CYTH3-208	ENST00000482460	SH3D19	Q5HYK7	790 aa		27.53	■■■□□ 2
CYTH3-208	ENST00000482460	TTC6	Q86TZ1	520 aa		27.53	■■■□□ 2
CYTH3-208	ENST00000482460	CTGF	P29279	349 aa		27.52	■■■□□ 2
CYTH3-208	ENST00000482460	HMGCS2	P54868	508 aa		27.52	■■■□□ 2
CYTH3-208	ENST00000482460	RRP1	P56182	461 aa	Known RBP	27.52	■■■□□ 2
CYTH3-208	ENST00000482460	JAG1	P78504	1218 aa		27.52	■■■□□ 2
CYTH3-208	ENST00000482460	TREML2	Q5T2D2	321 aa		27.52	■■■□□ 2
CYTH3-208	ENST00000482460	NBPF11	Q86T75	865 aa		27.52	■■■□□ 2
CYTH3-208	ENST00000482460	TRIM47	Q96LD4	638 aa		27.52	■■■□□ 2
CYTH3-208	ENST00000482460	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.52	■■■□□ 2
CYTH3-208	ENST00000482460	EHD4	Q9H223	541 aa		27.52	■■■□□ 2
CYTH3-208	ENST00000482460	CENPF	P49454	3210 aa		27.51	■■□□□ 1.99
CYTH3-208	ENST00000482460	GDF11	O95390	407 aa		27.51	■■□□□ 1.99
CYTH3-208	ENST00000482460	HOXD10	P28358	340 aa		27.51	■■□□□ 1.99
CYTH3-208	ENST00000482460	SLC9C1	Q4G0N8	1177 aa		27.51	■■□□□ 1.99
CYTH3-208	ENST00000482460	SERPINB13	Q9UIV8	391 aa		27.51	■■□□□ 1.99
CYTH3-208	ENST00000482460	PNMA3	Q9UL41	463 aa		27.51	■■□□□ 1.99
CYTH3-208	ENST00000482460	LOC285556	D6RIA3	1793 aa		27.5	■■□□□ 1.99
CYTH3-208	ENST00000482460	ECM2	O94769	699 aa	Predicted RBP	27.5	■■□□□ 1.99
CYTH3-208	ENST00000482460	FMNL1	O95466	1100 aa	Predicted RBP	27.5	■■□□□ 1.99
CYTH3-208	ENST00000482460	TATDN1	Q6P1N9	297 aa		27.5	■■□□□ 1.99
CYTH3-208	ENST00000482460	SMCR8	Q8TEV9	937 aa	Predicted RBP	27.5	■■□□□ 1.99
CYTH3-208	ENST00000482460	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms