RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 RASAL3Q86YV0 1011 aa12.99□□□□□ -0.33
ATG4B-219ENST00000479941 AMOTL1Q8IY63 956 aa12.99□□□□□ -0.33
ATG4B-219ENST00000479941 CRACR2BQ8N4Y2 399 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-219ENST00000479941 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
ATG4B-219ENST00000479941 CLMNQ96JQ2 1002 aa12.99□□□□□ -0.33
ATG4B-219ENST00000479941 TRIM34Q9BYJ4 488 aa12.99□□□□□ -0.33
ATG4B-219ENST00000479941 EHD4Q9H223 541 aa12.99□□□□□ -0.33
ATG4B-219ENST00000479941 PHF20L1A8MW92 1017 aa12.98□□□□□ -0.33
ATG4B-219ENST00000479941 PATL2C9JE40 543 aaKnown RBP12.98□□□□□ -0.33
ATG4B-219ENST00000479941 CTNND1O60716 968 aaKnown RBP12.98□□□□□ -0.33
ATG4B-219ENST00000479941 ZBTB48P10074 688 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-219ENST00000479941 INPP5BP32019 993 aa12.98□□□□□ -0.33
ATG4B-219ENST00000479941 MCMDC2Q4G0Z9 681 aa12.98□□□□□ -0.33
ATG4B-219ENST00000479941 NOL9Q5SY16 702 aaKnown RBP12.98□□□□□ -0.33
ATG4B-219ENST00000479941 ZKSCAN4Q969J2 545 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-219ENST00000479941 ELP3Q9H9T3 547 aa12.98□□□□□ -0.33
ATG4B-219ENST00000479941 DIAPH3Q9NSV4 1193 aa12.98□□□□□ -0.33
ATG4B-219ENST00000479941 SERPINB13Q9UIV8 391 aa12.98□□□□□ -0.33
ATG4B-219ENST00000479941 TAOK2Q9UL54 1235 aa12.98□□□□□ -0.33
ATG4B-219ENST00000479941 A0A0D9SFI3 127 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 AOC2O75106 756 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 APPP05067 770 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 SLURP2P0DP57 97 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 PLCD1P51178 756 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 MFAP1P55081 439 aaKnown RBP12.97□□□□□ -0.33
ATG4B-219ENST00000479941 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-219ENST00000479941 SPRYD7Q5W111 196 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 ERO1BQ86YB8 467 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-219ENST00000479941 FAM227BQ96M60 508 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 NACAP1Q9BZK3 213 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 ARPP21Q9UBL0 812 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-219ENST00000479941 SNCAIPQ9Y6H5 919 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 MYH1P12882 1939 aa12.97□□□□□ -0.33
ATG4B-219ENST00000479941 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 FAM196BA6NMK8 535 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 USP17L12C9JPN9 530 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 USP17L21D6R901 530 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 MAP2K1Q02750 393 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-219ENST00000479941 SLC4A8Q2Y0W8 1093 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 SBK1Q52WX2 424 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 C12orf60Q5U649 245 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 SCYL3Q8IZE3 742 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 IFNL3Q8IZI9 196 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 OPTNQ96CV9 577 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 WNK4Q96J92 1243 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 DNAJC18Q9H819 358 aa12.96□□□□□ -0.33
ATG4B-219ENST00000479941 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-219ENST00000479941 OTOFQ9HC10 1997 aa12.96□□□□□ -0.34
ATG4B-219ENST00000479941 NAV1Q8NEY1 1877 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 CAP2P40123 477 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 TDO2P48775 406 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-219ENST00000479941 PPATQ06203 517 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 GABPAQ06546 454 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 BMP2KLQ5H9B9 411 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 TATDN1Q6P1N9 297 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 CTR9Q6PD62 1173 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 CWC27Q6UX04 472 aaKnown RBP12.95□□□□□ -0.34
ATG4B-219ENST00000479941 CCDC129Q6ZRS4 1044 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 EPB41L4AQ9HCS5 686 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-219ENST00000479941 PICK1Q9NRD5 415 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 GINM1Q9NU53 330 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 SWAP70Q9UH65 585 aa12.95□□□□□ -0.34
ATG4B-219ENST00000479941 DDX60LQ5H9U9 1706 aaKnown RBP12.95□□□□□ -0.34
ATG4B-219ENST00000479941 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 MANSC4A6NHS7 340 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-219ENST00000479941 INHBEP58166 350 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 SREBF2Q12772 1141 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 MKRN3Q13064 507 aaKnown RBP12.94□□□□□ -0.34
ATG4B-219ENST00000479941 PPIL2Q13356 520 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 SKAP1Q86WV1 359 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 RUFY2Q8WXA3 655 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 ZIC5Q96T25 663 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 NAPBQ9H115 298 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 SIPA1L1O43166 1804 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 THSD7BQ9C0I4 1608 aa12.94□□□□□ -0.34
ATG4B-219ENST00000479941 RAD50Q92878 1312 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 ASNSP08243 561 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 CYP2D6P10635 497 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 PTPRAP18433 802 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 SHMT1P34896 483 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 GJA5P36382 358 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 GTF2A2P52657 109 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 ALX1Q15699 326 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 CERKLQ49MI3 558 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-219ENST00000479941 ZNF589Q86UQ0 364 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-219ENST00000479941 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 BEGAINQ9BUH8 593 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 TBC1D2Q9BYX2 928 aa12.93□□□□□ -0.34
ATG4B-219ENST00000479941 BAZ2AQ9UIF9 1905 aaKnown RBP12.92□□□□□ -0.34
ATG4B-219ENST00000479941 CYP2D7A0A087X1C5 515 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 MINDY4BA8MYZ0 360 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 IRF6O14896 467 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 FOXP2O15409 715 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 GDF11O95390 407 aa12.92□□□□□ -0.34
ATG4B-219ENST00000479941 HSPD1P10809 573 aaKnown RBP12.92□□□□□ -0.34
ATG4B-219ENST00000479941 CHMLP26374 656 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms