RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 STAP2Q9UGK3 403 aa13.65□□□□□ -0.22
HDLBP-237ENST00000479169 DDX60LQ5H9U9 1706 aaKnown RBP13.64□□□□□ -0.23
HDLBP-237ENST00000479169 GPR75-ASB3A0A0A6YYF3 556 aa13.64□□□□□ -0.23
HDLBP-237ENST00000479169 SPP2Q13103 211 aa13.64□□□□□ -0.23
HDLBP-237ENST00000479169 RRP1BQ14684 758 aaKnown RBP13.64□□□□□ -0.23
HDLBP-237ENST00000479169 FAM110CQ1W6H9 321 aa13.64□□□□□ -0.23
HDLBP-237ENST00000479169 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
HDLBP-237ENST00000479169 COA7Q96BR5 231 aa13.64□□□□□ -0.23
HDLBP-237ENST00000479169 LRCH3Q96II8 777 aa13.64□□□□□ -0.23
HDLBP-237ENST00000479169 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDLBP-237ENST00000479169 TBC1D12O60347 775 aa13.63□□□□□ -0.23
HDLBP-237ENST00000479169 HMGCS2P54868 508 aa13.63□□□□□ -0.23
HDLBP-237ENST00000479169 TRIM32Q13049 653 aa13.63□□□□□ -0.23
HDLBP-237ENST00000479169 MVPQ14764 893 aaKnown RBP13.63□□□□□ -0.23
HDLBP-237ENST00000479169 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
HDLBP-237ENST00000479169 PROCA1Q8NCQ7 364 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-237ENST00000479169 HMG20BQ9P0W2 317 aa13.63□□□□□ -0.23
HDLBP-237ENST00000479169 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
HDLBP-237ENST00000479169 FOCADQ5VW36 1801 aa13.62□□□□□ -0.23
HDLBP-237ENST00000479169 DNAH12Q6ZR08 3092 aa13.62□□□□□ -0.23
HDLBP-237ENST00000479169 NECAB2Q7Z6G3 386 aa13.62□□□□□ -0.23
HDLBP-237ENST00000479169 C7orf61Q8IZ16 206 aa13.62□□□□□ -0.23
HDLBP-237ENST00000479169 ZNF280CQ8ND82 737 aa13.62□□□□□ -0.23
HDLBP-237ENST00000479169 NEUROD6Q96NK8 337 aa13.62□□□□□ -0.23
HDLBP-237ENST00000479169 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
HDLBP-237ENST00000479169 OSBPL5Q9H0X9 879 aaPredicted RBP13.62□□□□□ -0.23
HDLBP-237ENST00000479169 ASCC2Q9H1I8 757 aaPredicted RBP13.62□□□□□ -0.23
HDLBP-237ENST00000479169 CUL9Q8IWT3 2517 aa13.62□□□□□ -0.23
HDLBP-237ENST00000479169 COL2A1P02458 1487 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-237ENST00000479169 MAST2Q6P0Q8 1798 aa13.61□□□□□ -0.23
HDLBP-237ENST00000479169 A0A1W2PPC1 479 aa13.61□□□□□ -0.23
HDLBP-237ENST00000479169 SRGAP3O43295 1099 aa13.61□□□□□ -0.23
HDLBP-237ENST00000479169 PEX10O60683 326 aa13.61□□□□□ -0.23
HDLBP-237ENST00000479169 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
HDLBP-237ENST00000479169 HMGCRP04035 888 aa13.61□□□□□ -0.23
HDLBP-237ENST00000479169 CAP2P40123 477 aa13.61□□□□□ -0.23
HDLBP-237ENST00000479169 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
HDLBP-237ENST00000479169 SPATA5Q8NB90 893 aa13.61□□□□□ -0.23
HDLBP-237ENST00000479169 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
HDLBP-237ENST00000479169 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
HDLBP-237ENST00000479169 ZMYND8Q9ULU4 1186 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-237ENST00000479169 AKAP2Q9Y2D5 859 aa13.61□□□□□ -0.23
HDLBP-237ENST00000479169 LAMA2P24043 3122 aaKnown RBP13.6□□□□□ -0.23
HDLBP-237ENST00000479169 GCLCP48506 637 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-237ENST00000479169 TEX11Q8IYF3 940 aa13.6□□□□□ -0.23
HDLBP-237ENST00000479169 SH3RF3Q8TEJ3 882 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-237ENST00000479169 RAI14Q9P0K7 980 aa13.6□□□□□ -0.23
HDLBP-237ENST00000479169 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
HDLBP-237ENST00000479169 USP17L5A8MUK1 530 aa13.59□□□□□ -0.23
HDLBP-237ENST00000479169 LDHCP07864 332 aa13.59□□□□□ -0.23
HDLBP-237ENST00000479169 CAPN2P17655 700 aa13.59□□□□□ -0.23
HDLBP-237ENST00000479169 MCAMP43121 646 aa13.59□□□□□ -0.23
HDLBP-237ENST00000479169 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-237ENST00000479169 GSTO1P78417 241 aa13.59□□□□□ -0.23
HDLBP-237ENST00000479169 SHROOM1Q2M3G4 852 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-237ENST00000479169 GORABQ5T7V8 394 aa13.59□□□□□ -0.23
HDLBP-237ENST00000479169 SLC17A8Q8NDX2 589 aa13.59□□□□□ -0.23
HDLBP-237ENST00000479169 GDF15Q99988 308 aa13.59□□□□□ -0.23
HDLBP-237ENST00000479169 HMX1Q9NP08 348 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-237ENST00000479169 FRMPD3Q5JV73 1810 aa13.59□□□□□ -0.23
HDLBP-237ENST00000479169 SYN1P17600 705 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 ARID4AP29374 1257 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-237ENST00000479169 JAG1P78504 1218 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 PABPC4Q13310 644 aaKnown RBP eCLIP13.58□□□□□ -0.24
HDLBP-237ENST00000479169 MTX1Q13505 466 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 MTMR2Q13614 643 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 SH3D19Q5HYK7 790 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 ANKLE1Q8NAG6 615 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 TRIB2Q92519 343 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 TBC1D2Q9BYX2 928 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 MYH1P12882 1939 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 RPTORQ8N122 1335 aa13.58□□□□□ -0.24
HDLBP-237ENST00000479169 DLL1O00548 723 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 MAP4K4O95819 1239 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-237ENST00000479169 GNAI3P08754 354 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 CT47B1P0C2W7 299 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-237ENST00000479169 CYP2B6P20813 491 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 RARSP54136 660 aaKnown RBP13.57□□□□□ -0.24
HDLBP-237ENST00000479169 IRX3P78415 501 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-237ENST00000479169 DNAJC18Q9H819 358 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 TXNRD2Q9NNW7 524 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 LRP2BPQ9P2M1 347 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 MORF4L1Q9UBU8 362 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 TNNQ9UQP3 1299 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 UNC80Q8N2C7 3258 aa13.57□□□□□ -0.24
HDLBP-237ENST00000479169 PNMA6EA0A0J9YXQ4 647 aa13.56□□□□□ -0.24
HDLBP-237ENST00000479169 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
HDLBP-237ENST00000479169 MAPKAPK5Q8IW41 473 aa13.56□□□□□ -0.24
HDLBP-237ENST00000479169 TGFBRAP1Q8WUH2 860 aa13.56□□□□□ -0.24
HDLBP-237ENST00000479169 P2RX7Q99572 595 aaKnown RBP13.56□□□□□ -0.24
HDLBP-237ENST00000479169 WDR18Q9BV38 432 aa13.56□□□□□ -0.24
HDLBP-237ENST00000479169 NBPF3Q9H094 633 aa13.56□□□□□ -0.24
HDLBP-237ENST00000479169 C11orf49Q9H6J7 331 aa13.56□□□□□ -0.24
HDLBP-237ENST00000479169 AS3MTQ9HBK9 375 aa13.56□□□□□ -0.24
HDLBP-237ENST00000479169 AATFQ9NY61 560 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDLBP-237ENST00000479169 PI4KBQ9UBF8 816 aa13.56□□□□□ -0.24
HDLBP-237ENST00000479169 HERC5Q9UII4 1024 aaKnown RBP13.56□□□□□ -0.24
HDLBP-237ENST00000479169 PFASO15067 1338 aa13.56□□□□□ -0.24
HDLBP-237ENST00000479169 GDF11O95390 407 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms