RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
COL16A1-211ENST00000479100 MCM9Q9NXL9 1143 aa18.25■□□□□ 0.51
COL16A1-211ENST00000479100 A0A0D9SFI3 127 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 USP2O75604 605 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 APPP05067 770 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 POLR3DP05423 398 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 HLA-DOAP06340 250 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 IREB2P48200 963 aaKnown RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 MCMDC2Q4G0Z9 681 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 CWC27Q6UX04 472 aaKnown RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 TRIM34Q9BYJ4 488 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 DHX36Q9H2U1 1008 aaKnown RBP18.24■□□□□ 0.51
COL16A1-211ENST00000479100 ATP8A2Q9NTI2 1148 aa18.24■□□□□ 0.51
COL16A1-211ENST00000479100 SLURP2P0DP57 97 aa18.23■□□□□ 0.51
COL16A1-211ENST00000479100 GNAT2P19087 354 aa18.23■□□□□ 0.51
COL16A1-211ENST00000479100 MAP3K11Q16584 847 aa18.23■□□□□ 0.51
COL16A1-211ENST00000479100 ZNF341Q9BYN7 854 aa18.23■□□□□ 0.51
COL16A1-211ENST00000479100 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-211ENST00000479100 ATRNL1Q5VV63 1379 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 FAM196BA6NMK8 535 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 TM4SF4P48230 202 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 DGKZQ13574 1117 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 TTC6Q86TZ1 520 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 CRACR2BQ8N4Y2 399 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-211ENST00000479100 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL16A1-211ENST00000479100 PI4KBQ9UBF8 816 aa18.22■□□□□ 0.51
COL16A1-211ENST00000479100 CDK5RAP2Q96SN8 1893 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 CCDC85CA6NKD9 419 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 GSG1L2A8MUP6 293 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 CYP2D6P10635 497 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 TDO2P48775 406 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 RGS19P49795 217 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 BMP2KLQ5H9B9 411 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 AMOTL1Q8IY63 956 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 WRNIP1Q96S55 665 aa18.21■□□□□ 0.51
COL16A1-211ENST00000479100 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-211ENST00000479100 PATL2C9JE40 543 aaKnown RBP18.2■□□□□ 0.5
COL16A1-211ENST00000479100 CHMLP26374 656 aa18.2■□□□□ 0.5
COL16A1-211ENST00000479100 MFAP1P55081 439 aaKnown RBP18.2■□□□□ 0.5
COL16A1-211ENST00000479100 MAP3K9P80192 1104 aa18.2■□□□□ 0.5
COL16A1-211ENST00000479100 NACAP1Q9BZK3 213 aa18.2■□□□□ 0.5
COL16A1-211ENST00000479100 CASP8AP2Q9UKL3 1982 aa18.2■□□□□ 0.5
COL16A1-211ENST00000479100 CYP2D7A0A087X1C5 515 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 USP17L12C9JPN9 530 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 USP17L21D6R901 530 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 PLCD1P51178 756 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 ZNF589Q86UQ0 364 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-211ENST00000479100 FOXP4Q8IVH2 680 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-211ENST00000479100 ANKRD13AQ8IZ07 590 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 ZKSCAN4Q969J2 545 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-211ENST00000479100 SLC10A4Q96EP9 437 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 CLMNQ96JQ2 1002 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 CSADQ9Y600 493 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 CCDC171Q6TFL3 1326 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 FOCADQ5VW36 1801 aa18.19■□□□□ 0.5
COL16A1-211ENST00000479100 MYH1P12882 1939 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 MINDY4BA8MYZ0 360 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 INPP5BP32019 993 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 GIMAP6Q6P9H5 292 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 IFNL3Q8IZI9 196 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.5
COL16A1-211ENST00000479100 NAPBQ9H115 298 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 ELP3Q9H9T3 547 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 EPB41L4AQ9HCS5 686 aaPredicted RBP18.18■□□□□ 0.5
COL16A1-211ENST00000479100 HERC5Q9UII4 1024 aaKnown RBP18.18■□□□□ 0.5
COL16A1-211ENST00000479100 NAV1Q8NEY1 1877 aa18.18■□□□□ 0.5
COL16A1-211ENST00000479100 TBC1D12O60347 775 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 EVX2Q03828 476 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 MKRN3Q13064 507 aaKnown RBP18.17■□□□□ 0.5
COL16A1-211ENST00000479100 VGLL4Q14135 290 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 CTR9Q6PD62 1173 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.17■□□□□ 0.5
COL16A1-211ENST00000479100 STK11IPQ8N1F8 1099 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 CFHR5Q9BXR6 569 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 SERPINB13Q9UIV8 391 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 ZNF112Q9UJU3 913 aa18.17■□□□□ 0.5
COL16A1-211ENST00000479100 UNCXA6NJT0 531 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 TBC1D8O95759 1140 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 NOM1Q5C9Z4 860 aaKnown RBP18.16■□□□□ 0.5
COL16A1-211ENST00000479100 C12orf60Q5U649 245 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 DYNLL2Q96FJ2 89 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 EHD4Q9H223 541 aa18.16■□□□□ 0.5
COL16A1-211ENST00000479100 ARPP21Q9UBL0 812 aaPredicted RBP18.16■□□□□ 0.5
COL16A1-211ENST00000479100 PHF20L1A8MW92 1017 aa18.15■□□□□ 0.5
COL16A1-211ENST00000479100 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
COL16A1-211ENST00000479100 CTU1Q7Z7A3 348 aaKnown RBP18.15■□□□□ 0.5
COL16A1-211ENST00000479100 ZNF296Q8WUU4 475 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-211ENST00000479100 DNAJC18Q9H819 358 aa18.15■□□□□ 0.5
COL16A1-211ENST00000479100 BAZ2AQ9UIF9 1905 aaKnown RBP18.15■□□□□ 0.5
COL16A1-211ENST00000479100 SMIM22K7EJ46 135 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 CDC45O75419 566 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 SREBF2Q12772 1141 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 SBK1Q52WX2 424 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 CASC1Q6TDU7 716 aa18.14■□□□□ 0.49
COL16A1-211ENST00000479100 METTL16Q86W50 562 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms