RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 JCADQ9P266 1359 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 DEPDC5O75140 1603 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 DEAF1O75398 565 aaPredicted RBP7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 HSD3B2P26439 372 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 CDC25BP30305 580 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 SOX9P48436 509 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 PWP1Q13610 501 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 PRPF40BQ6NWY9 871 aaKnown RBP7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 BHLHE41Q9C0J9 482 aaPredicted RBP7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 ADAM19Q9H013 955 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 CWC22Q9HCG8 908 aaKnown RBP7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 ABCB6Q9NP58 842 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 KCNQ5Q9NR82 932 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 NOP53Q9NZM5 478 aaKnown RBP7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 TRAK1Q9UPV9 953 aa7.97□□□□□ -1.13
STRADBP1-201ENST00000478954 NPHP4O75161 1426 aaPredicted RBP7.96□□□□□ -1.13
STRADBP1-201ENST00000478954 ITSN2Q9NZM3 1697 aa7.96□□□□□ -1.13
STRADBP1-201ENST00000478954 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 KRBA1A5PL33 1030 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 PIK3R2O00459 728 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 GREM1O60565 184 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 ITGB2P05107 769 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 GRIA4P48058 902 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 FAM160A1Q05DH4 1040 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 PTPROQ16827 1216 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 AFAP1Q8N556 730 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 PHC3Q8NDX5 983 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 ANKRD24Q8TF21 1146 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 HNRNPLLQ8WVV9 542 aaKnown RBP7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 RNPC3Q96LT9 517 aaKnown RBP7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 NT5C1AQ9BXI3 368 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 LIN7BQ9HAP6 207 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 PPP4R2Q9NY27 417 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 SOX13Q9UN79 622 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 TLR6Q9Y2C9 796 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 AKAP2Q9Y2D5 859 aa7.96□□□□□ -1.14
STRADBP1-201ENST00000478954 PLCH2O75038 1416 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 NUP153P49790 1475 aaKnown RBP7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 LINC01387J3KSC0 135 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 PTPRAP18433 802 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 CDC27P30260 824 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 SETDB1Q15047 1291 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 GRIK4Q16099 956 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 SPRED3Q2MJR0 410 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 CCNJLQ8IV13 435 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 FMR1NBQ8N0W7 255 aaPredicted RBP7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 ASAP3Q8TDY4 903 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 MUC3BQ9H195 1237 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 UBP1Q9NZI7 540 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 SIRPGQ9P1W8 387 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 PPM1HQ9ULR3 514 aa7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 COL16A1Q07092 1604 aaPredicted RBP7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 ZC3H13Q5T200 1668 aaKnown RBP7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.95□□□□□ -1.14
STRADBP1-201ENST00000478954 KIDINS220Q9ULH0 1771 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 NHSL1Q5SYE7 1610 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 FAM221BA6H8Z2 402 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 TM4SF5O14894 197 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 RAB11FIP3O75154 756 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 PF4P02776 101 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 CELA3AP09093 270 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 RAB33AQ14088 237 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 HGSNATQ68CP4 663 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 TPTE2Q6XPS3 522 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 VN1R5Q7Z5H4 357 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 KCNB2Q92953 911 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 SRPK1Q96SB4 655 aaKnown RBP7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 CARD10Q9BWT7 1032 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 SNTG2Q9NY99 539 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 MYO5CQ9NQX4 1742 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 MLH3Q9UHC1 1453 aa7.94□□□□□ -1.14
STRADBP1-201ENST00000478954 ABCC1P33527 1531 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 ENPP3O14638 875 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 SPATA31C1P0DKV0 1188 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 CRKP46108 304 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 TRIM28Q13263 835 aaKnown RBP7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 RASA3Q14644 834 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 MEX3CQ5U5Q3 659 aaKnown RBP7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 SHISA2Q6UWI4 295 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 DTHD1Q6ZMT9 781 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 SV2BQ7L1I2 683 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 GALNT11Q8NCW6 608 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 PPME1Q9Y570 386 aa7.93□□□□□ -1.14
STRADBP1-201ENST00000478954 SHPRHQ149N8 1683 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 SPDYE3A6NKU9 549 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 CHRNA4P43681 627 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 LIG3P49916 1009 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 PRRT3Q5FWE3 981 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 PCNX4Q63HM2 1172 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 ANKLE2Q86XL3 938 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 BSNDQ8WZ55 320 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 ANAPC16Q96DE5 110 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 TRIM55Q9BYV6 548 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 KANSL2Q9H9L4 492 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 STRIP2Q9ULQ0 834 aa7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 SUPT16HQ9Y5B9 1047 aaKnown RBP7.92□□□□□ -1.14
STRADBP1-201ENST00000478954 A0A096LPE4 126 aa7.91□□□□□ -1.14
STRADBP1-201ENST00000478954 A0A1W2PPZ6 126 aa7.91□□□□□ -1.14
STRADBP1-201ENST00000478954 PLEKHD1A6NEE1 506 aa7.91□□□□□ -1.14
STRADBP1-201ENST00000478954 H3BRJ5 948 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms