RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 DDX17Q92841 729 aaKnown RBP8.77□□□□□ -1.01
LRCH3-215ENST00000476664 FAM126AQ9BYI3 521 aaPredicted RBP8.77□□□□□ -1.01
LRCH3-215ENST00000476664 ZNF700Q9H0M5 742 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 ZDHHC3Q9NYG2 299 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 PNMA2Q9UL42 364 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 PTCH1Q13635 1447 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 NCOA3Q9Y6Q9 1424 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 ARHGAP35Q9NRY4 1499 aa8.77□□□□□ -1.01
LRCH3-215ENST00000476664 DHX29Q7Z478 1369 aaKnown RBP8.76□□□□□ -1.01
LRCH3-215ENST00000476664 TMEM2Q9UHN6 1383 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 CCDC163A0A0D9SF12 145 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 CCDC189A1A4V9 331 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 CPEP16870 476 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 SKOR1P84550 965 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 LONRF2Q1L5Z9 754 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 GNASQ5JWF2 1037 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 TTBK2Q6IQ55 1244 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 REXO1Q8N1G1 1221 aaKnown RBP8.76□□□□□ -1.01
LRCH3-215ENST00000476664 MYO1HQ8N1T3 1032 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 RBBP8NLQ8NC74 664 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-215ENST00000476664 C19orf44Q9H6X5 657 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 SPON1Q9HCB6 807 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 ZNRF3Q9ULT6 936 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 USP20Q9Y2K6 914 aa8.76□□□□□ -1.01
LRCH3-215ENST00000476664 RGPD1P0DJD0 1748 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 MEN1O00255 615 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 IFRD1O00458 451 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-215ENST00000476664 TLR3O15455 904 aaKnown RBP8.75□□□□□ -1.01
LRCH3-215ENST00000476664 PDE8AO60658 829 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 HSPA6P17066 643 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 TATP17735 454 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-215ENST00000476664 LSM11P83369 360 aaKnown RBP eCLIP8.75□□□□□ -1.01
LRCH3-215ENST00000476664 MPP2Q14168 576 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 PPP2R5EQ16537 467 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 C21orf62-AS1Q17RA5 79 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 SYCP2LQ5T4T6 812 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 TTC39BQ5VTQ0 682 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-215ENST00000476664 ATL2Q8NHH9 583 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 TNKS2Q9H2K2 1166 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 ABCB6Q9NP58 842 aa8.75□□□□□ -1.01
LRCH3-215ENST00000476664 LAS1LQ9Y4W2 734 aaKnown RBP8.75□□□□□ -1.01
LRCH3-215ENST00000476664 MARF1Q9Y4F3 1742 aaKnown RBP8.74□□□□□ -1.01
LRCH3-215ENST00000476664 A0A087X0B3 334 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 IRS4O14654 1257 aaPredicted RBP8.74□□□□□ -1.01
LRCH3-215ENST00000476664 RFPL3O75679 317 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 SCGB1D2O95969 90 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 CELA3AP09093 270 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 TFE3P19532 575 aaPredicted RBP8.74□□□□□ -1.01
LRCH3-215ENST00000476664 PLA2G4AP47712 749 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 GUCY2FP51841 1108 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 MCL1Q07820 350 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 FOXD4L6Q3SYB3 417 aaPredicted RBP8.74□□□□□ -1.01
LRCH3-215ENST00000476664 FOXD4L3Q6VB84 417 aaPredicted RBP8.74□□□□□ -1.01
LRCH3-215ENST00000476664 BTLAQ7Z6A9 289 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 NLRP13Q86W25 1043 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 LSRQ86X29 649 aaPredicted RBP8.74□□□□□ -1.01
LRCH3-215ENST00000476664 CHPFQ8IZ52 775 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 NME8Q8N427 588 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 C19orf47Q8N9M1 422 aaKnown RBP8.74□□□□□ -1.01
LRCH3-215ENST00000476664 GATAD2BQ8WXI9 593 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 NAP1L4Q99733 375 aaKnown RBP8.74□□□□□ -1.01
LRCH3-215ENST00000476664 LIN7BQ9HAP6 207 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 MAPRE3Q9UPY8 281 aa8.74□□□□□ -1.01
LRCH3-215ENST00000476664 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.74□□□□□ -1.01
LRCH3-215ENST00000476664 PIK3C2BO00750 1634 aa8.73□□□□□ -1.01
LRCH3-215ENST00000476664 SHTN1A0MZ66 631 aa8.73□□□□□ -1.01
LRCH3-215ENST00000476664 XYLBO75191 536 aa8.73□□□□□ -1.01
LRCH3-215ENST00000476664 EZH2Q15910 746 aaKnown RBP8.73□□□□□ -1.01
LRCH3-215ENST00000476664 KRT27Q7Z3Y8 459 aa8.73□□□□□ -1.01
LRCH3-215ENST00000476664 ZNF280CQ8ND82 737 aa8.73□□□□□ -1.01
LRCH3-215ENST00000476664 C7orf43Q8WVR3 580 aa8.73□□□□□ -1.01
LRCH3-215ENST00000476664 SLC39A13Q96H72 371 aa8.73□□□□□ -1.01
LRCH3-215ENST00000476664 C11orf16Q9NQ32 467 aa8.73□□□□□ -1.01
LRCH3-215ENST00000476664 LRRIQ1Q96JM4 1722 aa8.73□□□□□ -1.01
LRCH3-215ENST00000476664 E2F8A0AVK6 867 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 F13A1P00488 732 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 PTGIRP43119 386 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 PABPC4Q13310 644 aaKnown RBP eCLIP8.72□□□□□ -1.01
LRCH3-215ENST00000476664 AKAP4Q5JQC9 854 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 EEPD1Q7L9B9 569 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 RNF180Q86T96 592 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 FAM178BQ8IXR5 827 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 HSH2DQ96JZ2 352 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 MIR1-1HGQ9H1L0 117 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 SFMBT1Q9UHJ3 866 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 TLL2Q9Y6L7 1015 aa8.72□□□□□ -1.01
LRCH3-215ENST00000476664 KIAA1107Q9UPP5 1409 aa8.71□□□□□ -1.01
LRCH3-215ENST00000476664 TNS1Q9HBL0 1735 aaKnown RBP8.71□□□□□ -1.01
LRCH3-215ENST00000476664 GOLGB1Q14789 3259 aaKnown RBP8.71□□□□□ -1.01
LRCH3-215ENST00000476664 EGFRP00533 1210 aa8.71□□□□□ -1.02
LRCH3-215ENST00000476664 FOSP01100 380 aaPredicted RBP8.71□□□□□ -1.02
LRCH3-215ENST00000476664 NEK2P51955 445 aa8.71□□□□□ -1.02
LRCH3-215ENST00000476664 PEAR1Q5VY43 1037 aaPredicted RBP8.71□□□□□ -1.02
LRCH3-215ENST00000476664 CLEC4GQ6UXB4 293 aa8.71□□□□□ -1.02
LRCH3-215ENST00000476664 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.02
LRCH3-215ENST00000476664 GK5Q6ZS86 529 aa8.71□□□□□ -1.02
LRCH3-215ENST00000476664 PPM1EQ8WY54 764 aa8.71□□□□□ -1.02
LRCH3-215ENST00000476664 ZNF516Q92618 1163 aa8.71□□□□□ -1.02
LRCH3-215ENST00000476664 AIDAQ96BJ3 306 aa8.71□□□□□ -1.02
LRCH3-215ENST00000476664 LATS2Q9NRM7 1088 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms