RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ZBTB37Q5TC79 503 aa9.04□□□□□ -0.96
VPS50-212ENST00000476413 OVOS1Q6IE37 1185 aa9.04□□□□□ -0.96
VPS50-212ENST00000476413 ZNF746Q6NUN9 644 aaPredicted RBP9.04□□□□□ -0.96
VPS50-212ENST00000476413 C19orf47Q8N9M1 422 aaKnown RBP9.04□□□□□ -0.96
VPS50-212ENST00000476413 SMG8Q8ND04 991 aaKnown RBP9.04□□□□□ -0.96
VPS50-212ENST00000476413 WNT10AQ9GZT5 417 aa9.04□□□□□ -0.96
VPS50-212ENST00000476413 DISC1Q9NRI5 854 aa9.04□□□□□ -0.96
VPS50-212ENST00000476413 MSRB2Q9Y3D2 182 aa9.04□□□□□ -0.96
VPS50-212ENST00000476413 TBX22Q9Y458 520 aa9.04□□□□□ -0.96
VPS50-212ENST00000476413 TIAF1O95411 115 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 ACRP10323 421 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 ELNP15502 786 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS50-212ENST00000476413 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 IGF2-ASQ6U949 168 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 ACAD11Q709F0 780 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 MICAL1Q8TDZ2 1067 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 ACSF2Q96CM8 615 aaPredicted RBP9.03□□□□□ -0.96
VPS50-212ENST00000476413 FANCD2OSQ96PS1 177 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 TRIM55Q9BYV6 548 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 RNF208Q9H0X6 261 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 GSX1Q9H4S2 264 aaPredicted RBP9.03□□□□□ -0.96
VPS50-212ENST00000476413 RAD18Q9NS91 495 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 ACTR10Q9NZ32 417 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 GMIPQ9P107 970 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 ADAM30Q9UKF2 790 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 MKL2Q9ULH7 1088 aa9.03□□□□□ -0.96
VPS50-212ENST00000476413 PGRP06401 933 aa9.02□□□□□ -0.97
VPS50-212ENST00000476413 NEFMP07197 916 aa9.02□□□□□ -0.97
VPS50-212ENST00000476413 ADH5P11766 374 aa9.02□□□□□ -0.97
VPS50-212ENST00000476413 PDE4BQ07343 736 aa9.02□□□□□ -0.97
VPS50-212ENST00000476413 LRRFIP1Q32MZ4 808 aaKnown RBP9.02□□□□□ -0.97
VPS50-212ENST00000476413 SHISA2Q6UWI4 295 aa9.02□□□□□ -0.97
VPS50-212ENST00000476413 TAB3Q8N5C8 712 aaPredicted RBP9.02□□□□□ -0.97
VPS50-212ENST00000476413 ATG4CQ96DT6 458 aa9.02□□□□□ -0.97
VPS50-212ENST00000476413 TM9SF2Q99805 663 aa9.02□□□□□ -0.97
VPS50-212ENST00000476413 SNTG2Q9NY99 539 aa9.02□□□□□ -0.97
VPS50-212ENST00000476413 A0A1W2PQH9 124 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 FAM221BA6H8Z2 402 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 FANCGO15287 622 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 GUCY2CP25092 1073 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 TRIM28Q13263 835 aaKnown RBP9.01□□□□□ -0.97
VPS50-212ENST00000476413 NFE2L2Q16236 605 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 DDR2Q16832 855 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 CDCP2Q5VXM1 449 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 UBE3DQ7Z6J8 389 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 JAZF1Q86VZ6 243 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 RNF214Q8ND24 703 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
VPS50-212ENST00000476413 CNNM2Q9H8M5 875 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 FBRSQ9HAH7 460 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 TJP2Q9UDY2 1190 aa9.01□□□□□ -0.97
VPS50-212ENST00000476413 TLDC2A0PJX2 215 aa9□□□□□ -0.97
VPS50-212ENST00000476413 CHURC1-FNTBB4DL54 471 aa9□□□□□ -0.97
VPS50-212ENST00000476413 TNFRSF10CO14798 259 aa9□□□□□ -0.97
VPS50-212ENST00000476413 DRD2P14416 443 aa9□□□□□ -0.97
VPS50-212ENST00000476413 NME1P15531 152 aaKnown RBP9□□□□□ -0.97
VPS50-212ENST00000476413 SOX4Q06945 474 aaPredicted RBP9□□□□□ -0.97
VPS50-212ENST00000476413 ZYXQ15942 572 aaKnown RBP9□□□□□ -0.97
VPS50-212ENST00000476413 NUTM2GQ5VZR2 741 aa9□□□□□ -0.97
VPS50-212ENST00000476413 TTC6Q86TZ1 520 aa9□□□□□ -0.97
VPS50-212ENST00000476413 NLGN1Q8N2Q7 840 aa9□□□□□ -0.97
VPS50-212ENST00000476413 AGGF1Q8N302 714 aaeCLIP9□□□□□ -0.97
VPS50-212ENST00000476413 TMEM130Q8N3G9 435 aa9□□□□□ -0.97
VPS50-212ENST00000476413 SPDYE3A6NKU9 549 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 UPK3BL1B0FP48 263 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 UPK3BL2E5RIL1 263 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 F8W735 103 aaPredicted RBP8.99□□□□□ -0.97
VPS50-212ENST00000476413 ETF1P62495 437 aaKnown RBP8.99□□□□□ -0.97
VPS50-212ENST00000476413 GRIK4Q16099 956 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 NLRC3Q7RTR2 1065 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 ZSCAN1Q8NBB4 408 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 C2CD4AQ8NCU7 369 aaPredicted RBP8.99□□□□□ -0.97
VPS50-212ENST00000476413 DEPDC7Q96QD5 511 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 SLC9A7Q96T83 725 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 CYP4F12Q9HCS2 524 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 ST7Q9NRC1 585 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 AP4E1Q9UPM8 1137 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 R3HCC1Q9Y3T6 440 aaKnown RBP8.99□□□□□ -0.97
VPS50-212ENST00000476413 CNTNAP5Q8WYK1 1306 aa8.99□□□□□ -0.97
VPS50-212ENST00000476413 TTLL4Q14679 1199 aa8.98□□□□□ -0.97
VPS50-212ENST00000476413 NKG7Q16617 165 aa8.98□□□□□ -0.97
VPS50-212ENST00000476413 INTS3Q68E01 1043 aaKnown RBP8.98□□□□□ -0.97
VPS50-212ENST00000476413 LRP10Q7Z4F1 713 aa8.98□□□□□ -0.97
VPS50-212ENST00000476413 MCATQ8IVS2 390 aaKnown RBP8.98□□□□□ -0.97
VPS50-212ENST00000476413 MRPL41Q8IXM3 137 aaKnown RBP8.98□□□□□ -0.97
VPS50-212ENST00000476413 SRPK1Q96SB4 655 aaKnown RBP8.98□□□□□ -0.97
VPS50-212ENST00000476413 CCDC113Q9H0I3 377 aa8.98□□□□□ -0.97
VPS50-212ENST00000476413 KLHL3Q9UH77 587 aa8.98□□□□□ -0.97
VPS50-212ENST00000476413 MAPK8IP1Q9UQF2 711 aa8.98□□□□□ -0.97
VPS50-212ENST00000476413 ACTL7BQ9Y614 415 aa8.98□□□□□ -0.97
VPS50-212ENST00000476413 LTBP3Q9NS15 1303 aa8.98□□□□□ -0.97
VPS50-212ENST00000476413 U2SURPO15042 1029 aaKnown RBP8.97□□□□□ -0.97
VPS50-212ENST00000476413 HCLS1P14317 486 aaPredicted RBP8.97□□□□□ -0.97
VPS50-212ENST00000476413 MLECQ14165 292 aa8.97□□□□□ -0.97
VPS50-212ENST00000476413 PPP2R5EQ16537 467 aa8.97□□□□□ -0.97
VPS50-212ENST00000476413 ARSHQ5FYA8 562 aa8.97□□□□□ -0.97
VPS50-212ENST00000476413 LARP1BQ659C4 914 aaKnown RBP8.97□□□□□ -0.97
VPS50-212ENST00000476413 UNC5AQ6ZN44 842 aa8.97□□□□□ -0.97
VPS50-212ENST00000476413 Q6ZS46 218 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms