RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NAA16Q6N069 864 aaPredicted RBP19.75■□□□□ 0.75
COL1A1-205ENST00000476387 GPAT2Q6NUI2 795 aa19.75■□□□□ 0.75
COL1A1-205ENST00000476387 BCL11AQ9H165 835 aa19.75■□□□□ 0.75
COL1A1-205ENST00000476387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.75■□□□□ 0.75
COL1A1-205ENST00000476387 CPA4Q9UI42 421 aa19.75■□□□□ 0.75
COL1A1-205ENST00000476387 SLC45A1Q9Y2W3 748 aa19.75■□□□□ 0.75
COL1A1-205ENST00000476387 CDK5RAP2Q96SN8 1893 aa19.75■□□□□ 0.75
COL1A1-205ENST00000476387 POTEFA5A3E0 1075 aa19.74■□□□□ 0.75
COL1A1-205ENST00000476387 CYP2E1P05181 493 aaPredicted RBP19.74■□□□□ 0.75
COL1A1-205ENST00000476387 PPP4CP60510 307 aa19.74■□□□□ 0.75
COL1A1-205ENST00000476387 PRPF38BQ5VTL8 546 aaKnown RBP19.74■□□□□ 0.75
COL1A1-205ENST00000476387 FOCADQ5VW36 1801 aa19.74■□□□□ 0.75
COL1A1-205ENST00000476387 IFIT2P09913 472 aaKnown RBP19.73■□□□□ 0.75
COL1A1-205ENST00000476387 SLURP2P0DP57 97 aa19.73■□□□□ 0.75
COL1A1-205ENST00000476387 ZAP70P43403 619 aa19.73■□□□□ 0.75
COL1A1-205ENST00000476387 SH3RF3Q8TEJ3 882 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-205ENST00000476387 DHX36Q9H2U1 1008 aaKnown RBP19.73■□□□□ 0.75
COL1A1-205ENST00000476387 HERC5Q9UII4 1024 aaKnown RBP19.73■□□□□ 0.75
COL1A1-205ENST00000476387 BCRP11274 1271 aa19.72■□□□□ 0.75
COL1A1-205ENST00000476387 HOXD10P28358 340 aa19.72■□□□□ 0.75
COL1A1-205ENST00000476387 PSMC4P43686 418 aa19.72■□□□□ 0.75
COL1A1-205ENST00000476387 TMEM106CQ9BVX2 250 aa19.72■□□□□ 0.75
COL1A1-205ENST00000476387 TBC1D2Q9BYX2 928 aa19.72■□□□□ 0.75
COL1A1-205ENST00000476387 AATFQ9NY61 560 aaKnown RBP eCLIP19.72■□□□□ 0.75
COL1A1-205ENST00000476387 PI4KBQ9UBF8 816 aa19.72■□□□□ 0.75
COL1A1-205ENST00000476387 PHIPQ8WWQ0 1821 aa19.72■□□□□ 0.75
COL1A1-205ENST00000476387 PTPRFP10586 1907 aa19.71■□□□□ 0.75
COL1A1-205ENST00000476387 CYP2C8P10632 490 aa19.71■□□□□ 0.75
COL1A1-205ENST00000476387 GADL1Q6ZQY3 521 aa19.71■□□□□ 0.75
COL1A1-205ENST00000476387 TRIM47Q96LD4 638 aa19.71■□□□□ 0.75
COL1A1-205ENST00000476387 PIH1D3Q9NQM4 214 aaKnown RBP19.71■□□□□ 0.75
COL1A1-205ENST00000476387 SRRDQ9UH36 339 aa19.71■□□□□ 0.75
COL1A1-205ENST00000476387 ZSWIM8A7E2V4 1837 aa19.71■□□□□ 0.75
COL1A1-205ENST00000476387 MKI67P46013 3256 aaKnown RBP19.7■□□□□ 0.74
COL1A1-205ENST00000476387 TRIM75PA6NK02 468 aa19.7■□□□□ 0.74
COL1A1-205ENST00000476387 FAM196BA6NMK8 535 aa19.7■□□□□ 0.74
COL1A1-205ENST00000476387 CTGFP29279 349 aa19.7■□□□□ 0.74
COL1A1-205ENST00000476387 CAP2P40123 477 aa19.7■□□□□ 0.74
COL1A1-205ENST00000476387 TMED8Q6PL24 325 aaPredicted RBP19.7■□□□□ 0.74
COL1A1-205ENST00000476387 LRRCC1Q9C099 1032 aa19.7■□□□□ 0.74
COL1A1-205ENST00000476387 AGTPBP1Q9UPW5 1226 aa19.7■□□□□ 0.74
COL1A1-205ENST00000476387 MYH7P12883 1935 aa19.7■□□□□ 0.74
COL1A1-205ENST00000476387 BRCA2P51587 3418 aa19.7■□□□□ 0.74
COL1A1-205ENST00000476387 IDH1O75874 414 aaKnown RBP19.69■□□□□ 0.74
COL1A1-205ENST00000476387 FMNL1O95466 1100 aaPredicted RBP19.69■□□□□ 0.74
COL1A1-205ENST00000476387 OSBPP22059 807 aa19.69■□□□□ 0.74
COL1A1-205ENST00000476387 ADGRA1Q86SQ6 560 aa19.69■□□□□ 0.74
COL1A1-205ENST00000476387 CERS3Q8IU89 383 aa19.69■□□□□ 0.74
COL1A1-205ENST00000476387 PROCA1Q8NCQ7 364 aaPredicted RBP19.69■□□□□ 0.74
COL1A1-205ENST00000476387 EN2P19622 333 aaPredicted RBP19.68■□□□□ 0.74
COL1A1-205ENST00000476387 FCGRTP55899 365 aa19.68■□□□□ 0.74
COL1A1-205ENST00000476387 METTL16Q86W50 562 aaKnown RBP19.68■□□□□ 0.74
COL1A1-205ENST00000476387 ZNF280CQ8ND82 737 aa19.68■□□□□ 0.74
COL1A1-205ENST00000476387 SH3TC2Q8TF17 1288 aa19.68■□□□□ 0.74
COL1A1-205ENST00000476387 TGFBRAP1Q8WUH2 860 aa19.68■□□□□ 0.74
COL1A1-205ENST00000476387 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.68■□□□□ 0.74
COL1A1-205ENST00000476387 NDUFB9Q9Y6M9 179 aa19.68■□□□□ 0.74
COL1A1-205ENST00000476387 FLT1P17948 1338 aa19.68■□□□□ 0.74
COL1A1-205ENST00000476387 USP17L5A8MUK1 530 aa19.67■□□□□ 0.74
COL1A1-205ENST00000476387 SLC34A2O95436 690 aa19.67■□□□□ 0.74
COL1A1-205ENST00000476387 MAP3K12Q12852 859 aa19.67■□□□□ 0.74
COL1A1-205ENST00000476387 TTF1Q15361 905 aaPredicted RBP19.67■□□□□ 0.74
COL1A1-205ENST00000476387 SLC4A8Q2Y0W8 1093 aa19.67■□□□□ 0.74
COL1A1-205ENST00000476387 CCDC84Q86UT8 332 aaPredicted RBP19.67■□□□□ 0.74
COL1A1-205ENST00000476387 FOXP4Q8IVH2 680 aaPredicted RBP19.67■□□□□ 0.74
COL1A1-205ENST00000476387 MAPKAPK5Q8IW41 473 aa19.67■□□□□ 0.74
COL1A1-205ENST00000476387 PNMA3Q9UL41 463 aa19.67■□□□□ 0.74
COL1A1-205ENST00000476387 MYH1P12882 1939 aa19.66■□□□□ 0.74
COL1A1-205ENST00000476387 CYP7A1P22680 504 aa19.66■□□□□ 0.74
COL1A1-205ENST00000476387 SPP2Q13103 211 aa19.66■□□□□ 0.74
COL1A1-205ENST00000476387 RRP1BQ14684 758 aaKnown RBP19.66■□□□□ 0.74
COL1A1-205ENST00000476387 RAET1EQ8TD07 263 aa19.66■□□□□ 0.74
COL1A1-205ENST00000476387 SMCR8Q8TEV9 937 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-205ENST00000476387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.66■□□□□ 0.74
COL1A1-205ENST00000476387 CRBNQ96SW2 442 aa19.66■□□□□ 0.74
COL1A1-205ENST00000476387 DNAJC2Q99543 621 aaKnown RBP19.66■□□□□ 0.74
COL1A1-205ENST00000476387 AS3MTQ9HBK9 375 aa19.66■□□□□ 0.74
COL1A1-205ENST00000476387 ATAD5Q96QE3 1844 aa19.66■□□□□ 0.74
COL1A1-205ENST00000476387 MYPNQ86TC9 1320 aa19.66■□□□□ 0.74
COL1A1-205ENST00000476387 GRK4P32298 578 aa19.65■□□□□ 0.74
COL1A1-205ENST00000476387 MAGEB6Q8N7X4 407 aa19.65■□□□□ 0.74
COL1A1-205ENST00000476387 ANTXR1Q9H6X2 564 aa19.65■□□□□ 0.74
COL1A1-205ENST00000476387 GINM1Q9NU53 330 aa19.65■□□□□ 0.74
COL1A1-205ENST00000476387 LOC285556D6RIA3 1793 aa19.65■□□□□ 0.74
COL1A1-205ENST00000476387 SIPA1L1O43166 1804 aa19.65■□□□□ 0.74
COL1A1-205ENST00000476387 SMARCA5O60264 1052 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-205ENST00000476387 ECM2O94769 699 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-205ENST00000476387 ASNSP08243 561 aa19.64■□□□□ 0.73
COL1A1-205ENST00000476387 PABPC4Q13310 644 aaKnown RBP eCLIP19.64■□□□□ 0.73
COL1A1-205ENST00000476387 SH3D19Q5HYK7 790 aa19.64■□□□□ 0.73
COL1A1-205ENST00000476387 TREML2Q5T2D2 321 aa19.64■□□□□ 0.73
COL1A1-205ENST00000476387 WDR18Q9BV38 432 aa19.64■□□□□ 0.73
COL1A1-205ENST00000476387 TRIM34Q9BYJ4 488 aa19.64■□□□□ 0.73
COL1A1-205ENST00000476387 DCTPP1Q9H773 170 aa19.64■□□□□ 0.73
COL1A1-205ENST00000476387 DNAJC18Q9H819 358 aa19.64■□□□□ 0.73
COL1A1-205ENST00000476387 NAV1Q8NEY1 1877 aa19.63■□□□□ 0.73
COL1A1-205ENST00000476387 HLA-DOAP06340 250 aa19.63■□□□□ 0.73
COL1A1-205ENST00000476387 HMGCS2P54868 508 aa19.63■□□□□ 0.73
COL1A1-205ENST00000476387 PRKCZQ05513 592 aa19.63■□□□□ 0.73
COL1A1-205ENST00000476387 CRACR2BQ8N4Y2 399 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms