RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 DNAJC14Q6Y2X3 702 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-205ENST00000475993 CCDC129Q6ZRS4 1044 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 METTL16Q86W50 562 aaKnown RBP11.97□□□□□ -0.49
ABCF1-205ENST00000475993 RIN2Q8WYP3 895 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-205ENST00000475993 EYA1Q99502 592 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 TEX13AQ9BXU3 409 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-205ENST00000475993 AGPSO00116 658 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 SKAP2O75563 359 aaPredicted RBP11.96□□□□□ -0.49
ABCF1-205ENST00000475993 GGCXP38435 758 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 AMPHP49418 695 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 G3BP1Q13283 466 aaKnown RBP eCLIP11.96□□□□□ -0.491e-6■■■□□ 15
ABCF1-205ENST00000475993 STIM1Q13586 685 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 SNX1Q13596 522 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 HSP90AA4PQ58FG1 418 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 SYNE3Q6ZMZ3 975 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 CCDC148Q8NFR7 591 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 SPATS2LQ9NUQ6 558 aaKnown RBP11.96□□□□□ -0.49
ABCF1-205ENST00000475993 CHPF2Q9P2E5 772 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 ODF2LQ9ULJ1 636 aa11.96□□□□□ -0.49
ABCF1-205ENST00000475993 GRIN2DO15399 1336 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 MCM3P25205 808 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 USP14P54578 494 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 GRIK3Q13003 919 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 PPFIA1Q13136 1202 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 SHC4Q6S5L8 630 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 ARMC2Q8NEN0 867 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 C8orf76Q96K31 380 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 CD248Q9HCU0 757 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 NFE2L3Q9Y4A8 694 aa11.96□□□□□ -0.5
ABCF1-205ENST00000475993 MRC1P22897 1456 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 EIF3HO15372 352 aaKnown RBP eCLIP11.95□□□□□ -0.5
ABCF1-205ENST00000475993 MCMDC2Q4G0Z9 681 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 KLHL23Q8NBE8 558 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 ENOX1Q8TC92 643 aaKnown RBP11.95□□□□□ -0.5
ABCF1-205ENST00000475993 BCAS4Q8TDM0 211 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 CDC5LQ99459 802 aaKnown RBP11.95□□□□□ -0.5
ABCF1-205ENST00000475993 MYO1AQ9UBC5 1043 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 TTF2Q9UNY4 1162 aaKnown RBP11.95□□□□□ -0.5
ABCF1-205ENST00000475993 PCDHA5Q9Y5H7 936 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 PRR36Q9H6K5 1346 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 KIF28PB7ZC32 967 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 FSBPO95073 299 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 EIF2S2P20042 333 aaKnown RBP11.95□□□□□ -0.5
ABCF1-205ENST00000475993 MARCKSP29966 332 aaPredicted RBP11.95□□□□□ -0.5
ABCF1-205ENST00000475993 ARMCX6Q7L4S7 300 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 AMOTL1Q8IY63 956 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 C9orf78Q9NZ63 289 aaPredicted RBP11.95□□□□□ -0.5
ABCF1-205ENST00000475993 MYO6Q9UM54 1294 aa11.95□□□□□ -0.5
ABCF1-205ENST00000475993 A0A1B0GTH6 734 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 SHTN1A0MZ66 631 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 GOLGA6CA6NDK9 693 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 HOXB7P09629 217 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 GOLGA6DP0CG33 693 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 GCKP35557 465 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 RWDD2BP57060 319 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.59e-7■□□□□ 11.3
ABCF1-205ENST00000475993 CRYMQ14894 314 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 TRIM74Q86UV6 250 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 TRIM73Q86UV7 250 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 KIRREL3Q8IZU9 778 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 CAPS2Q9BXY5 557 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 EHD4Q9H223 541 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 KIF9Q9HAQ2 790 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 GOLGA6AQ9NYA3 693 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 TSPOAP1O95153 1857 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 PPP6R2O75170 966 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 FECHP22830 423 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 KIF23Q02241 960 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-205ENST00000475993 TRAF1Q13077 416 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 RESP18Q5W5W9 173 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 NCAPH2Q6IBW4 605 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 NUTM2AQ8IVF1 878 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-205ENST00000475993 FBXL16Q8N461 479 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 ZKSCAN4Q969J2 545 aaPredicted RBP11.94□□□□□ -0.5
ABCF1-205ENST00000475993 FLT4P35916 1363 aa11.94□□□□□ -0.5
ABCF1-205ENST00000475993 TARSL2A2RTX5 802 aaKnown RBP11.93□□□□□ -0.5
ABCF1-205ENST00000475993 CHGBP05060 677 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 ATP5JP18859 108 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 MDM2Q00987 491 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-205ENST00000475993 RBL2Q08999 1139 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 CCDC96Q2M329 555 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 ANKRD23Q86SG2 305 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 ELOA2Q8IYF1 753 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-205ENST00000475993 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 PARD3BQ8TEW8 1205 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 KAZALD1Q96I82 304 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 SH3GL2Q99962 352 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 KDM6AO15550 1401 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-205ENST00000475993 CHUKO15111 745 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 ABL1P00519 1130 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
ABCF1-205ENST00000475993 LONRF3Q496Y0 759 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 PREPLQ4J6C6 727 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-205ENST00000475993 CCDC102BQ68D86 513 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 ANKRD18AQ8IVF6 992 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 CRACR2AQ9BSW2 395 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 MYO1FO00160 1098 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 PEX19P40855 299 aa11.93□□□□□ -0.5
ABCF1-205ENST00000475993 ARHGAP25P42331 645 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms