RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 PPM1EQ8WY54 764 aa17.63■□□□□ 0.41
ATG9A-220ENST00000475339 BADQ92934 168 aa17.63■□□□□ 0.41
ATG9A-220ENST00000475339 ASB2Q96Q27 587 aa17.63■□□□□ 0.41
ATG9A-220ENST00000475339 ASCC2Q9H1I8 757 aaPredicted RBP17.63■□□□□ 0.41
ATG9A-220ENST00000475339 SYNGAP1Q96PV0 1343 aa17.63■□□□□ 0.41
ATG9A-220ENST00000475339 MAST2Q6P0Q8 1798 aa17.62■□□□□ 0.41
ATG9A-220ENST00000475339 PEX10O60683 326 aa17.62■□□□□ 0.41
ATG9A-220ENST00000475339 SH3BP5LQ7L8J4 393 aa17.62■□□□□ 0.41
ATG9A-220ENST00000475339 PROCA1Q8NCQ7 364 aaPredicted RBP17.62■□□□□ 0.41
ATG9A-220ENST00000475339 PRDM5Q9NQX1 630 aaPredicted RBP17.62■□□□□ 0.41
ATG9A-220ENST00000475339 ATP11BQ9Y2G3 1177 aa17.62■□□□□ 0.41
ATG9A-220ENST00000475339 LTBP2Q14767 1821 aa17.62■□□□□ 0.41
ATG9A-220ENST00000475339 ZNF521Q96K83 1311 aa17.62■□□□□ 0.41
ATG9A-220ENST00000475339 PHIPQ8WWQ0 1821 aa17.61■□□□□ 0.41
ATG9A-220ENST00000475339 MAP3K10Q02779 954 aa17.61■□□□□ 0.41
ATG9A-220ENST00000475339 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
ATG9A-220ENST00000475339 SPP2Q13103 211 aa17.61■□□□□ 0.41
ATG9A-220ENST00000475339 SOCS4Q8WXH5 440 aa17.61■□□□□ 0.41
ATG9A-220ENST00000475339 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
ATG9A-220ENST00000475339 MORF4L1Q9UBU8 362 aa17.61■□□□□ 0.41
ATG9A-220ENST00000475339 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
ATG9A-220ENST00000475339 E9PSI1 815 aa17.6■□□□□ 0.41
ATG9A-220ENST00000475339 RGS3P49796 1198 aa17.6■□□□□ 0.41
ATG9A-220ENST00000475339 ZSCAN29Q8IWY8 852 aaPredicted RBP17.6■□□□□ 0.41
ATG9A-220ENST00000475339 TRMT44Q8IYL2 757 aaKnown RBP17.6■□□□□ 0.41
ATG9A-220ENST00000475339 C1QTNF1Q9BXJ1 281 aa17.6■□□□□ 0.41
ATG9A-220ENST00000475339 HMGCS2P54868 508 aa17.59■□□□□ 0.41
ATG9A-220ENST00000475339 PABPC4Q13310 644 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■□□□□ 9
ATG9A-220ENST00000475339 PDE3AQ14432 1141 aa17.59■□□□□ 0.41
ATG9A-220ENST00000475339 USP6NLQ92738 828 aa17.59■□□□□ 0.41
ATG9A-220ENST00000475339 THEGQ9P2T0 379 aa17.59■□□□□ 0.41
ATG9A-220ENST00000475339 DDTLA6NHG4 134 aaPredicted RBP17.58■□□□□ 0.4
ATG9A-220ENST00000475339 F6X3S4 739 aa17.58■□□□□ 0.4
ATG9A-220ENST00000475339 METTL24Q5JXM2 366 aa17.58■□□□□ 0.4
ATG9A-220ENST00000475339 RNPC3Q96LT9 517 aaKnown RBP17.58■□□□□ 0.4
ATG9A-220ENST00000475339 TXNRD2Q9NNW7 524 aa17.58■□□□□ 0.4
ATG9A-220ENST00000475339 DOCK1Q14185 1865 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 GRM8O00222 908 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 ENTPD3O75355 529 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 PRDX5P30044 214 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 MRPS5P82675 430 aaKnown RBP17.57■□□□□ 0.4
ATG9A-220ENST00000475339 LRRC24Q50LG9 513 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 BEND3Q5T5X7 828 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 ZNF280CQ8ND82 737 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 WDR66Q8TBY9 1149 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 NECAB3Q96P71 396 aaPredicted RBP17.57■□□□□ 0.4
ATG9A-220ENST00000475339 ZNF576Q9H609 170 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 ARIH1Q9Y4X5 557 aaPredicted RBP17.57■□□□□ 0.4
ATG9A-220ENST00000475339 MYO9BQ13459 2157 aa17.57■□□□□ 0.4
ATG9A-220ENST00000475339 DOCK2Q92608 1830 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 DNM1LO00429 736 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 PDE8BO95263 885 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 RGS2P41220 211 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 POTEEQ6S8J3 1075 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 SH3RF1Q7Z6J0 888 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 GPRC5AQ8NFJ5 357 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 IDI2Q9BXS1 227 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
ATG9A-220ENST00000475339 HCN4Q9Y3Q4 1203 aa17.56■□□□□ 0.4
ATG9A-220ENST00000475339 TRIM43BA6NCK2 446 aa17.55■□□□□ 0.4
ATG9A-220ENST00000475339 VAMP4O75379 141 aa17.55■□□□□ 0.4
ATG9A-220ENST00000475339 DNAJB2P25686 324 aa17.55■□□□□ 0.4
ATG9A-220ENST00000475339 EPHB4P54760 987 aa17.55■□□□□ 0.4
ATG9A-220ENST00000475339 MORN1Q5T089 497 aa17.55■□□□□ 0.4
ATG9A-220ENST00000475339 SLC39A5Q6ZMH5 540 aa17.55■□□□□ 0.4
ATG9A-220ENST00000475339 IL27Q8NEV9 243 aa17.55■□□□□ 0.4
ATG9A-220ENST00000475339 LPAR1Q92633 364 aa17.55■□□□□ 0.4
ATG9A-220ENST00000475339 TRIM43Q96BQ3 446 aaPredicted RBP17.55■□□□□ 0.4
ATG9A-220ENST00000475339 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
ATG9A-220ENST00000475339 PORCNQ9H237 461 aa17.55■□□□□ 0.4
ATG9A-220ENST00000475339 FAM196BA6NMK8 535 aa17.54■□□□□ 0.4
ATG9A-220ENST00000475339 MAPK4P31152 587 aa17.54■□□□□ 0.4
ATG9A-220ENST00000475339 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
ATG9A-220ENST00000475339 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
ATG9A-220ENST00000475339 TRIM60Q495X7 471 aa17.54■□□□□ 0.4
ATG9A-220ENST00000475339 GPR142Q7Z601 462 aa17.54■□□□□ 0.4
ATG9A-220ENST00000475339 APBA2Q99767 749 aa17.54■□□□□ 0.4
ATG9A-220ENST00000475339 PDLIM7Q9NR12 457 aa17.54■□□□□ 0.4
ATG9A-220ENST00000475339 MUC6Q6W4X9 2439 aa17.54■□□□□ 0.4
ATG9A-220ENST00000475339 LOC285556D6RIA3 1793 aa17.53■□□□□ 0.4
ATG9A-220ENST00000475339 CNGA1P29973 690 aa17.53■□□□□ 0.4
ATG9A-220ENST00000475339 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
ATG9A-220ENST00000475339 Q3C1V9 767 aa17.53■□□□□ 0.4
ATG9A-220ENST00000475339 GJC2Q5T442 439 aaPredicted RBP17.53■□□□□ 0.4
ATG9A-220ENST00000475339 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
ATG9A-220ENST00000475339 KAZALD1Q96I82 304 aa17.53■□□□□ 0.4
ATG9A-220ENST00000475339 LRFN3Q9BTN0 628 aa17.53■□□□□ 0.4
ATG9A-220ENST00000475339 DDX4Q9NQI0 724 aaKnown RBP17.53■□□□□ 0.4
ATG9A-220ENST00000475339 C9orf78Q9NZ63 289 aaPredicted RBP17.53■□□□□ 0.4
ATG9A-220ENST00000475339 FLRT1Q9NZU1 646 aa17.53■□□□□ 0.4
ATG9A-220ENST00000475339 RBPJLQ9UBG7 517 aa17.53■□□□□ 0.4
ATG9A-220ENST00000475339 FRMPD3Q5JV73 1810 aa17.53■□□□□ 0.4
ATG9A-220ENST00000475339 LDHBP07195 334 aaKnown RBP17.52■□□□□ 0.4
ATG9A-220ENST00000475339 IFIT1P09914 478 aaKnown RBP17.52■□□□□ 0.4
ATG9A-220ENST00000475339 ITGB8P26012 769 aa17.52■□□□□ 0.4
ATG9A-220ENST00000475339 PICALMQ13492 652 aa17.52■□□□□ 0.4
ATG9A-220ENST00000475339 CCDC85BQ15834 202 aaPredicted RBP17.52■□□□□ 0.4
ATG9A-220ENST00000475339 SH3D19Q5HYK7 790 aa17.52■□□□□ 0.4
ATG9A-220ENST00000475339 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms