RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SUPT16HQ9Y5B9 1047 aaKnown RBP7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 LTBP1Q14766 1721 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 LRRIQ1Q96JM4 1722 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 A0A1W2PPC1 479 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 LZTS3O60299 673 aaPredicted RBP7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 GPSM2P81274 684 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 APPL2Q8NEU8 664 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 TEKT1Q969V4 418 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 CAPNS2Q96L46 248 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 SERINC2Q96SA4 455 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 SLKQ9H2G2 1235 aaPredicted RBP7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 HOMER2Q9NSB8 354 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 TFIP11Q9UBB9 837 aaKnown RBP7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 BCS1LQ9Y276 419 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 POTEB3A0JP26 581 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 STIP1P31948 543 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 ARID5AQ03989 594 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 PTK7Q13308 1070 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 HYIQ5T013 277 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 TMEM164Q5U3C3 297 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 ZCCHC8Q6NZY4 707 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 POTEBQ6S5H4 581 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 MTERF4Q7Z6M4 381 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 MICALL1Q8N3F8 863 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 KLHL23Q8NBE8 558 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 TBC1D20Q96BZ9 403 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 RMI1Q9H9A7 625 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 RIC8AQ9NPQ8 531 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 SEPT9Q9UHD8 586 aaPredicted RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 ZHX1Q9UKY1 873 aaPredicted RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 KNSTRNQ9Y448 316 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 TSPAN6O43657 245 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 OAS2P29728 719 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 MAGEA8P43361 318 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 SH3BGRP55822 239 aaPredicted RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 LMBRD2Q68DH5 695 aaPredicted RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 PDXDC2PQ6P474 469 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 CPLX2Q6PUV4 134 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 STK11IPQ8N1F8 1099 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 STAG2Q8N3U4 1231 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 TMEM87AQ8NBN3 555 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 E2F7Q96AV8 911 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 HS3ST6Q96QI5 342 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 NCAPGQ9BPX3 1015 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 PTPRHQ9HD43 1115 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 DONSONQ9NYP3 566 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 DDX41Q9UJV9 622 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 ABT1Q9ULW3 272 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 CASP8AP2Q9UKL3 1982 aa7.12□□□□□ -1.27
SMARCE1-208ENST00000474246 PEAK1Q9H792 1746 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 ARHGEF5Q12774 1597 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 DNAJB2P25686 324 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 CCDC15Q0P6D6 951 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 CBLBQ13191 982 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 PARP10Q53GL7 1025 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 TTLL5Q6EMB2 1281 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 PHC3Q8NDX5 983 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 PPHLN1Q8NEY8 458 aaKnown RBP7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 RWDD1Q9H446 243 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 SMC4Q9NTJ3 1288 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 PGAP2Q9UHJ9 254 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 CFAP65Q6ZU64 1925 aaKnown RBP7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 CACNA1GO43497 2377 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 PHRF1Q9P1Y6 1649 aaKnown RBP7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 LMTK2Q8IWU2 1503 aa7.11□□□□□ -1.27
SMARCE1-208ENST00000474246 DDX11L8A8MPP1 907 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 FAM25EA8MYX2 175 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 K7ELQ4 463 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 LILRB3O75022 631 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 MSL3P1P0C860 447 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 SEC13P55735 322 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 EXOSC10Q01780 885 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 HLTFQ14527 1009 aaKnown RBP eCLIP7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 NFE2Q16621 373 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 TSHZ3Q63HK5 1081 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 ZNF687Q8N1G0 1237 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 DUSP9Q99956 384 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 WASHC2AQ641Q2 1341 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 SBF2Q86WG5 1849 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 C19orf81C9J6K1 198 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 XBP1P17861 261 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 MRE11P49959 708 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 NFX1Q12986 1120 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 SWT1Q5T5J6 900 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 NUTM2GQ5VZR2 741 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 PTF1AQ7RTS3 328 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 TAX1BP1Q86VP1 789 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 SNX32Q86XE0 403 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 C17orf50Q8WW18 174 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 SKA1Q96BD8 255 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 SPAG5Q96R06 1193 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 C1QTNF1Q9BXJ1 281 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 GINM1Q9NU53 330 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 CEP152O94986 1710 aa7.1□□□□□ -1.27
SMARCE1-208ENST00000474246 LRRC37A3O60309 1634 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 SBNO1A3KN83 1393 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms