RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 VEGFAP15692 232 aaPredicted RBP6.11□□□□□ -1.43
LRCH3-214ENST00000473177 PCSK2P16519 638 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 LBX1P52954 281 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 MFAP1P55081 439 aaKnown RBP6.11□□□□□ -1.43
LRCH3-214ENST00000473177 RGL4Q8IZJ4 473 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 GJD3Q8N144 294 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 ANP32BQ92688 251 aaKnown RBP6.11□□□□□ -1.43
LRCH3-214ENST00000473177 LTV1Q96GA3 475 aaPredicted RBP6.11□□□□□ -1.43
LRCH3-214ENST00000473177 ABHD17AQ96GS6 310 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 POLIQ9UNA4 740 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 KNSTRNQ9Y448 316 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 KCNMB2Q9Y691 235 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 DOT1LQ8TEK3 1739 aa6.11□□□□□ -1.43
LRCH3-214ENST00000473177 ERBB4Q15303 1308 aa6.1□□□□□ -1.43
LRCH3-214ENST00000473177 E9PSI1 815 aa6.1□□□□□ -1.43
LRCH3-214ENST00000473177 EGFRP00533 1210 aa6.1□□□□□ -1.43
LRCH3-214ENST00000473177 DPEP1P16444 411 aa6.1□□□□□ -1.43
LRCH3-214ENST00000473177 MAPK1P28482 360 aa6.1□□□□□ -1.43
LRCH3-214ENST00000473177 SFSWAPQ12872 951 aaKnown RBP6.1□□□□□ -1.43
LRCH3-214ENST00000473177 SKOR2Q2VWA4 1001 aaPredicted RBP6.1□□□□□ -1.43
LRCH3-214ENST00000473177 DNAJC14Q6Y2X3 702 aaPredicted RBP6.1□□□□□ -1.43
LRCH3-214ENST00000473177 SMIM5Q71RC9 77 aa6.1□□□□□ -1.43
LRCH3-214ENST00000473177 ZCRB1Q8TBF4 217 aaKnown RBP6.1□□□□□ -1.43
LRCH3-214ENST00000473177 CHMP4BQ9H444 224 aaKnown RBP6.1□□□□□ -1.43
LRCH3-214ENST00000473177 MARK1Q9P0L2 795 aa6.1□□□□□ -1.43
LRCH3-214ENST00000473177 LY75O60449 1722 aa6.1□□□□□ -1.43
LRCH3-214ENST00000473177 C5P01031 1676 aa6.1□□□□□ -1.43
LRCH3-214ENST00000473177 TNRC6CQ9HCJ0 1690 aaKnown RBP6.1□□□□□ -1.43
LRCH3-214ENST00000473177 NPC1L1Q9UHC9 1359 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 GOLGA6L3A6NEY3 463 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 GPR25O00155 361 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 IGHA2P01877 340 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 FGFR3P22607 806 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 EHHADHQ08426 723 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 TRIP4Q15650 581 aaPredicted RBP6.09□□□□□ -1.43
LRCH3-214ENST00000473177 DALRD3Q5D0E6 543 aaKnown RBP6.09□□□□□ -1.43
LRCH3-214ENST00000473177 MPRIPQ6WCQ1 1025 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.09□□□□□ -1.43
LRCH3-214ENST00000473177 CMTR1Q8N1G2 835 aaKnown RBP6.09□□□□□ -1.43
LRCH3-214ENST00000473177 FRAT1Q92837 279 aaPredicted RBP6.09□□□□□ -1.43
LRCH3-214ENST00000473177 SMARCC1Q92922 1105 aaPredicted RBP6.09□□□□□ -1.43
LRCH3-214ENST00000473177 ASB16Q96NS5 453 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 CRBNQ96SW2 442 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 FAM129BQ96TA1 746 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 RWDD1Q9H446 243 aaPredicted RBP6.09□□□□□ -1.43
LRCH3-214ENST00000473177 EFCC1Q9HA90 598 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 PIM2Q9P1W9 311 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 FNDC3AQ9Y2H6 1198 aaKnown RBP6.09□□□□□ -1.43
LRCH3-214ENST00000473177 USP20Q9Y2K6 914 aa6.09□□□□□ -1.43
LRCH3-214ENST00000473177 CNTNAP1P78357 1384 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 EVC2Q86UK5 1308 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 RRP9O43818 475 aaKnown RBP6.08□□□□□ -1.44
LRCH3-214ENST00000473177 XYLBO75191 536 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 ERCC3P19447 782 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 MRE11P49959 708 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 GAS6Q14393 721 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 PDE12Q6L8Q7 609 aaKnown RBP6.08□□□□□ -1.44
LRCH3-214ENST00000473177 XKR5Q6UX68 686 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 TMC7Q7Z402 723 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 AMIGO3Q86WK7 504 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 ZSCAN29Q8IWY8 852 aaPredicted RBP6.08□□□□□ -1.44
LRCH3-214ENST00000473177 GPR161Q8N6U8 529 aaKnown RBP6.08□□□□□ -1.44
LRCH3-214ENST00000473177 TTC16Q8NEE8 873 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 DMRTB1Q96MA1 342 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 GSX2Q9BZM3 304 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 GGNBP2Q9H3C7 697 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 RGPD5Q99666 1765 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 C4BP0C0L5 1744 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 PKD1L3Q7Z443 1732 aa6.08□□□□□ -1.44
LRCH3-214ENST00000473177 USP54Q70EL1 1684 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 GLTPD2A6NH11 291 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 HSP90AA1P07900 732 aaKnown RBP6.07□□□□□ -1.44
LRCH3-214ENST00000473177 CT47B1P0C2W7 299 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-214ENST00000473177 CD33P20138 364 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-214ENST00000473177 CANXP27824 592 aaKnown RBP6.07□□□□□ -1.44
LRCH3-214ENST00000473177 RGS19P49795 217 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 RASSF7Q02833 373 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 SPEM2Q0P670 501 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 CCINQ13939 588 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 NLGN1Q8N2Q7 840 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 RAPGEF4Q8WZA2 1011 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 DCAF5Q96JK2 942 aa6.07□□□□□ -1.44
LRCH3-214ENST00000473177 PNNQ9H307 717 aaKnown RBP6.07□□□□□ -1.44
LRCH3-214ENST00000473177 PCDH11XQ9BZA7 1347 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 PCDH11YQ9BZA8 1340 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 KIAA1210Q9ULL0 1709 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 GOLGA6L22H0YM25 854 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 HSPA8P11142 646 aaKnown RBP6.06□□□□□ -1.44
LRCH3-214ENST00000473177 MX2P20592 715 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 LMNB1P20700 586 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 CTBSQ01459 385 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 MAP2K1Q02750 393 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-214ENST00000473177 GRIN2CQ14957 1233 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 C8orf34Q49A92 452 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 NME9Q86XW9 330 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 ALKBH8Q96BT7 664 aaKnown RBP6.06□□□□□ -1.44
LRCH3-214ENST00000473177 TRIM44Q96DX7 344 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-214ENST00000473177 MAP7D2Q96T17 732 aa6.06□□□□□ -1.44
LRCH3-214ENST00000473177 PANK3Q9H999 370 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms