RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, humanhuman

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18B-208ENST00000472267 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
MRPS18B-208ENST00000472267 FOCADQ5VW36 1801 aa12.63□□□□□ -0.39
MRPS18B-208ENST00000472267 COL4A5P29400 1685 aa12.63□□□□□ -0.39
MRPS18B-208ENST00000472267 STX6O43752 255 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 ORC4O43929 436 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 RXRAP19793 462 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 PLCD1P51178 756 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 LARP1BQ659C4 914 aaKnown RBP12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 CDC42EP5Q6NZY7 148 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 NSUN7Q8NE18 718 aaKnown RBP12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 LLPHQ9BRT6 129 aaKnown RBP12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 VPS33BQ9H267 617 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 PSME4Q14997 1843 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 FER1L6Q2WGJ9 1857 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 ECM29Q5VYK3 1845 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 VPS37CA5D8V6 355 aaPredicted RBP12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 PSMD14O00487 310 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 ZBTB43O43298 467 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 BAG4O95429 457 aaKnown RBP12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 CTDNEP1O95476 244 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 FGRP09769 529 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 LIFRP42702 1097 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 METAP2P50579 478 aaKnown RBP eCLIP12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 APOBEC3HQ6NTF7 200 aaKnown RBP12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 APOA5Q6Q788 366 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 SYNE3Q6ZMZ3 975 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 CCDC144CPQ8IYA2 1237 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 FAM184AQ8NB25 1140 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 CHMP4CQ96CF2 233 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 ZDHHC15Q96MV8 337 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 MYL10Q9BUA6 226 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 MKNK2Q9HBH9 465 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 ZNRF3Q9ULT6 936 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 SLC12A7Q9Y666 1083 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 TNKSO95271 1327 aa12.62□□□□□ -0.39
MRPS18B-208ENST00000472267 TSPY2A6NKD2 308 aa12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 GOLGA8AA7E2F4 631 aa12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 CPLX1O14810 134 aa12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 WDHD1O75717 1129 aaPredicted RBP12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 FOSBP53539 338 aa12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 HDLBPQ00341 1268 aaKnown RBP12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 FOXD4L6Q3SYB3 417 aaPredicted RBP12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 FOXD4L3Q6VB84 417 aaPredicted RBP12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 SGMS1Q86VZ5 419 aa12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 ZSCAN10Q96SZ4 725 aaPredicted RBP12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 DDX4Q9NQI0 724 aaKnown RBP12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 DDX60LQ5H9U9 1706 aaKnown RBP12.61□□□□□ -0.39
MRPS18B-208ENST00000472267 ROBO3Q96MS0 1386 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 NFKBIEO00221 500 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 DHX16O60231 1041 aaKnown RBP12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 ZSCAN22P10073 491 aaPredicted RBP12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 PDCP20941 246 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 CACNB3P54284 484 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 RASSF7Q02833 373 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 CFAP100Q494V2 611 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 TMTC2Q8N394 836 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 SMARCC2Q8TAQ2 1214 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 MTA3Q9BTC8 594 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 MRIQ9BWK5 157 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 SERPINA10Q9UK55 444 aa12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
MRPS18B-208ENST00000472267 MYO3BQ8WXR4 1341 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 NMT2O60551 498 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 VIL1P09327 827 aaKnown RBP12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 HMGN5P82970 282 aaKnown RBP12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 TFAP4Q01664 338 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 SEC23AQ15436 765 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 IFIT1BQ5T764 474 aaKnown RBP12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 MCTP1Q6DN14 999 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 ZNF444Q8N0Y2 327 aaPredicted RBP12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 ENAHQ8N8S7 591 aaPredicted RBP12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 CHAMP1Q96JM3 812 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 MTMR6Q9Y217 621 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 GOLGB1Q14789 3259 aaKnown RBP12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 DDX11L8A8MPP1 907 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 ADD1P35611 737 aaKnown RBP12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 CDK8P49336 464 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 NFIAQ12857 509 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 C16orf86Q6ZW13 317 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 TTC6Q86TZ1 520 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 ZNF654Q8IZM8 581 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 OSBPL5Q9H0X9 879 aaPredicted RBP12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 ZNF287Q9HBT7 754 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 HDAC9Q9UKV0 1011 aa12.59□□□□□ -0.39
MRPS18B-208ENST00000472267 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.4
MRPS18B-208ENST00000472267 H3BQV1 296 aa12.58□□□□□ -0.4
MRPS18B-208ENST00000472267 F13A1P00488 732 aa12.58□□□□□ -0.4
MRPS18B-208ENST00000472267 TSPY3P0CV98 308 aa12.58□□□□□ -0.4
MRPS18B-208ENST00000472267 TSPY8P0CW00 308 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms