RNA–Protein interactions for RNA: ENST00000471993.1

AC078828.1-201, humanhuman

TSL 3 BASIC

Gene AC078828.1, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078828.1-201ENST00000471993 UBXN4Q92575 508 aa9.14□□□□□ -0.95
AC078828.1-201ENST00000471993 BACH2Q9BYV9 841 aa9.14□□□□□ -0.95
AC078828.1-201ENST00000471993 CCDC86Q9H6F5 360 aaKnown RBP9.14□□□□□ -0.95
AC078828.1-201ENST00000471993 FZD6O60353 706 aa9.13□□□□□ -0.95
AC078828.1-201ENST00000471993 C1QTNF9P0C862 333 aa9.13□□□□□ -0.95
AC078828.1-201ENST00000471993 ITIH2P19823 946 aa9.13□□□□□ -0.95
AC078828.1-201ENST00000471993 PRR23BQ6ZRT6 265 aa9.13□□□□□ -0.95
AC078828.1-201ENST00000471993 AMIGO3Q86WK7 504 aa9.13□□□□□ -0.95
AC078828.1-201ENST00000471993 ASB11Q8WXH4 323 aa9.13□□□□□ -0.95
AC078828.1-201ENST00000471993 P4HBP07237 508 aaKnown RBP9.12□□□□□ -0.95
AC078828.1-201ENST00000471993 GLI1P08151 1106 aa9.12□□□□□ -0.95
AC078828.1-201ENST00000471993 ZP2Q05996 745 aa9.12□□□□□ -0.95
AC078828.1-201ENST00000471993 RAD51AP2Q09MP3 1159 aa9.12□□□□□ -0.95
AC078828.1-201ENST00000471993 TTLL4Q14679 1199 aa9.12□□□□□ -0.95
AC078828.1-201ENST00000471993 KIF4BQ2VIQ3 1234 aa9.12□□□□□ -0.95
AC078828.1-201ENST00000471993 ZNF862O60290 1169 aa9.11□□□□□ -0.95
AC078828.1-201ENST00000471993 AFMP43652 599 aa9.11□□□□□ -0.95
AC078828.1-201ENST00000471993 FKBP4Q02790 459 aaKnown RBP eCLIP9.11□□□□□ -0.95
AC078828.1-201ENST00000471993 IKZF1Q13422 519 aa9.11□□□□□ -0.95
AC078828.1-201ENST00000471993 KIAA0319Q5VV43 1072 aa9.11□□□□□ -0.95
AC078828.1-201ENST00000471993 PCOLCE2Q9UKZ9 415 aa9.11□□□□□ -0.95
AC078828.1-201ENST00000471993 CADPSQ9ULU8 1353 aa9.11□□□□□ -0.95
AC078828.1-201ENST00000471993 SLFN14P0C7P3 912 aa9.1□□□□□ -0.95
AC078828.1-201ENST00000471993 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
AC078828.1-201ENST00000471993 AAMPQ13685 434 aa9.1□□□□□ -0.95
AC078828.1-201ENST00000471993 EAPPQ56P03 285 aaPredicted RBP9.1□□□□□ -0.95
AC078828.1-201ENST00000471993 ZSCAN29Q8IWY8 852 aaPredicted RBP9.1□□□□□ -0.95
AC078828.1-201ENST00000471993 HEXIM2Q96MH2 286 aaKnown RBP9.1□□□□□ -0.95
AC078828.1-201ENST00000471993 HCLS1P14317 486 aaPredicted RBP9.09□□□□□ -0.95
AC078828.1-201ENST00000471993 ERCC5P28715 1186 aaPredicted RBP9.09□□□□□ -0.95
AC078828.1-201ENST00000471993 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
AC078828.1-201ENST00000471993 C9orf131Q5VYM1 1079 aa9.09□□□□□ -0.95
AC078828.1-201ENST00000471993 FAM214BQ7L5A3 538 aa9.09□□□□□ -0.95
AC078828.1-201ENST00000471993 SPACA3Q8IXA5 215 aa9.09□□□□□ -0.95
AC078828.1-201ENST00000471993 TOP6BLQ8N6T0 577 aa9.09□□□□□ -0.95
AC078828.1-201ENST00000471993 FAM13AO94988 1023 aa9.08□□□□□ -0.96
AC078828.1-201ENST00000471993 NEFMP07197 916 aa9.08□□□□□ -0.96
AC078828.1-201ENST00000471993 SF3A1Q15459 793 aaKnown RBP9.08□□□□□ -0.96
AC078828.1-201ENST00000471993 MPZL3Q6UWV2 235 aa9.08□□□□□ -0.96
AC078828.1-201ENST00000471993 TMC7Q7Z402 723 aa9.08□□□□□ -0.96
AC078828.1-201ENST00000471993 METTL16Q86W50 562 aaKnown RBP9.08□□□□□ -0.96
AC078828.1-201ENST00000471993 NFIBO00712 420 aa9.07□□□□□ -0.96
AC078828.1-201ENST00000471993 RNGTTO60942 597 aaKnown RBP9.07□□□□□ -0.96
AC078828.1-201ENST00000471993 INHBBP09529 407 aa9.07□□□□□ -0.96
AC078828.1-201ENST00000471993 FMR1Q06787 632 aaKnown RBP eCLIP9.07□□□□□ -0.96
AC078828.1-201ENST00000471993 RBCK1Q9BYM8 510 aa9.07□□□□□ -0.96
AC078828.1-201ENST00000471993 KRT82Q9NSB4 513 aa9.07□□□□□ -0.96
AC078828.1-201ENST00000471993 PPP1R1BQ9UD71 204 aaPredicted RBP9.07□□□□□ -0.96
AC078828.1-201ENST00000471993 SCAMP3O14828 347 aaKnown RBP9.06□□□□□ -0.96
AC078828.1-201ENST00000471993 FBXO15Q8NCQ5 510 aaPredicted RBP9.06□□□□□ -0.96
AC078828.1-201ENST00000471993 KIRREL1Q96J84 757 aa9.06□□□□□ -0.96
AC078828.1-201ENST00000471993 RNF19AQ9NV58 838 aa9.06□□□□□ -0.96
AC078828.1-201ENST00000471993 CCDC87Q9NVE4 849 aa9.06□□□□□ -0.96
AC078828.1-201ENST00000471993 IGF2BP3O00425 579 aaKnown RBP eCLIP9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 TREHO43280 583 aa9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 IGHA2P01877 340 aa9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 RPS26P11Q5JNZ5 115 aaPredicted RBP9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 KRTAP5-3Q6L8H2 238 aa9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 GIMAP6Q6P9H5 292 aa9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 ISL2Q96A47 359 aa9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 TINF2Q9BSI4 451 aa9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 ZC3H12CQ9C0D7 883 aaKnown RBP9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 CD320Q9NPF0 282 aa9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 JAG2Q9Y219 1238 aa9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 PITPNM2Q9BZ72 1349 aa9.05□□□□□ -0.96
AC078828.1-201ENST00000471993 CANXP27824 592 aaKnown RBP9.04□□□□□ -0.96
AC078828.1-201ENST00000471993 NKPD1Q17RQ9 610 aa9.04□□□□□ -0.96
AC078828.1-201ENST00000471993 TMEM67Q5HYA8 995 aa9.04□□□□□ -0.96
AC078828.1-201ENST00000471993 EHD4Q9H223 541 aa9.04□□□□□ -0.96
AC078828.1-201ENST00000471993 ABCB6Q9NP58 842 aa9.04□□□□□ -0.96
AC078828.1-201ENST00000471993 NPIPB6E9PJ23 425 aa9.03□□□□□ -0.96
AC078828.1-201ENST00000471993 GSTP1P09211 210 aaKnown RBP9.03□□□□□ -0.96
AC078828.1-201ENST00000471993 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
AC078828.1-201ENST00000471993 DSC3Q14574 896 aa9.03□□□□□ -0.96
AC078828.1-201ENST00000471993 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
AC078828.1-201ENST00000471993 CYFIP1Q7L576 1253 aa9.03□□□□□ -0.96
AC078828.1-201ENST00000471993 FAM161BQ96MY7 647 aa9.03□□□□□ -0.96
AC078828.1-201ENST00000471993 C19orf73Q9NVV2 129 aa9.03□□□□□ -0.96
AC078828.1-201ENST00000471993 GTF2IRD1Q9UHL9 959 aa9.03□□□□□ -0.96
AC078828.1-201ENST00000471993 CTSWP56202 376 aa9.02□□□□□ -0.97
AC078828.1-201ENST00000471993 FAAP100Q0VG06 881 aa9.02□□□□□ -0.97
AC078828.1-201ENST00000471993 PRPF40BQ6NWY9 871 aaKnown RBP9.02□□□□□ -0.97
AC078828.1-201ENST00000471993 CLCN7P51798 805 aa9.01□□□□□ -0.97
AC078828.1-201ENST00000471993 KCNA10Q16322 511 aa9.01□□□□□ -0.97
AC078828.1-201ENST00000471993 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.01□□□□□ -0.97
AC078828.1-201ENST00000471993 PPM1GO15355 546 aaPredicted RBP9□□□□□ -0.97
AC078828.1-201ENST00000471993 MED14OSP0DP75 135 aa9□□□□□ -0.97
AC078828.1-201ENST00000471993 DPH6Q7L8W6 267 aa9□□□□□ -0.97
AC078828.1-201ENST00000471993 NT5DC4Q86YG4 428 aa9□□□□□ -0.97
AC078828.1-201ENST00000471993 NSUN3Q9H649 340 aaKnown RBP9□□□□□ -0.97
AC078828.1-201ENST00000471993 FANCCQ00597 558 aa8.99□□□□□ -0.97
AC078828.1-201ENST00000471993 PDZD3Q86UT5 571 aa8.99□□□□□ -0.97
AC078828.1-201ENST00000471993 RNF214Q8ND24 703 aa8.99□□□□□ -0.97
AC078828.1-201ENST00000471993 DIRC2Q96SL1 478 aa8.99□□□□□ -0.97
AC078828.1-201ENST00000471993 NPHS2Q9NP85 383 aa8.99□□□□□ -0.97
AC078828.1-201ENST00000471993 GDNFP39905 211 aa8.98□□□□□ -0.97
AC078828.1-201ENST00000471993 ZNF157P51786 506 aaPredicted RBP8.98□□□□□ -0.97
AC078828.1-201ENST00000471993 ERVK-24P63145 666 aa8.98□□□□□ -0.97
AC078828.1-201ENST00000471993 ZC3H12AQ5D1E8 599 aaKnown RBP8.98□□□□□ -0.97
AC078828.1-201ENST00000471993 SETDB2Q96T68 719 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms