RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 DACH1Q9UI36 760 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 MINPP1Q9UNW1 487 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 MYBBP1AQ9BQG0 1328 aaKnown RBP8.71□□□□□ -1.02
HDAC3-206ENST00000471968 BRWD1Q9NSI6 2320 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 ASPMQ8IZT6 3477 aa8.71□□□□□ -1.02
HDAC3-206ENST00000471968 FRMPD3Q5JV73 1810 aa8.7□□□□□ -1.02
HDAC3-206ENST00000471968 RLFQ13129 1914 aa8.7□□□□□ -1.02
HDAC3-206ENST00000471968 PROB1E7EW31 1015 aa8.7□□□□□ -1.02
HDAC3-206ENST00000471968 EIF2S2P20042 333 aaKnown RBP8.7□□□□□ -1.02
HDAC3-206ENST00000471968 RABGGTBP53611 331 aa8.7□□□□□ -1.02
HDAC3-206ENST00000471968 EIF4A1P60842 406 aaKnown RBP8.7□□□□□ -1.02
HDAC3-206ENST00000471968 C16orf59Q7L2K0 433 aa8.7□□□□□ -1.02
HDAC3-206ENST00000471968 DZIP1LQ8IYY4 767 aaKnown RBP8.7□□□□□ -1.02
HDAC3-206ENST00000471968 SOCS4Q8WXH5 440 aa8.7□□□□□ -1.02
HDAC3-206ENST00000471968 CERS4Q9HA82 394 aa8.7□□□□□ -1.02
HDAC3-206ENST00000471968 TMEM39AQ9NV64 488 aa8.7□□□□□ -1.02
HDAC3-206ENST00000471968 PLXNB2O15031 1838 aa8.69□□□□□ -1.02
HDAC3-206ENST00000471968 MSCO60682 206 aa8.69□□□□□ -1.02
HDAC3-206ENST00000471968 PQBP1O60828 265 aaKnown RBP8.69□□□□□ -1.02
HDAC3-206ENST00000471968 MYOGP15173 224 aa8.69□□□□□ -1.02
HDAC3-206ENST00000471968 ADCYAP1R1P41586 468 aa8.69□□□□□ -1.02
HDAC3-206ENST00000471968 CCDC174Q6PII3 467 aa8.69□□□□□ -1.02
HDAC3-206ENST00000471968 SUGP1Q8IWZ8 645 aaKnown RBP8.69□□□□□ -1.02
HDAC3-206ENST00000471968 IRF2BPLQ9H1B7 796 aa8.69□□□□□ -1.02
HDAC3-206ENST00000471968 LEMD3Q9Y2U8 911 aa8.69□□□□□ -1.02
HDAC3-206ENST00000471968 ZHX2Q9Y6X8 837 aa8.69□□□□□ -1.02
HDAC3-206ENST00000471968 GAKO14976 1311 aa8.69□□□□□ -1.02
HDAC3-206ENST00000471968 PLXNA3P51805 1871 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 H0Y858 1186 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 ACRP10323 421 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 C1orf53Q5VUE5 145 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 ZNF365Q70YC5 407 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 ADSSL1Q8N142 457 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 SLC44A5Q8NCS7 719 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 ARRDC4Q8NCT1 418 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-206ENST00000471968 PBXIP1Q96AQ6 731 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 ISCA1Q9BUE6 129 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 ALG13Q9NP73 1137 aaKnown RBP8.68□□□□□ -1.02
HDAC3-206ENST00000471968 TLR9Q9NR96 1032 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 SERPINA10Q9UK55 444 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 PNMA3Q9UL41 463 aa8.68□□□□□ -1.02
HDAC3-206ENST00000471968 TTF2Q9UNY4 1162 aaKnown RBP8.68□□□□□ -1.02
HDAC3-206ENST00000471968 EPOPA6NHQ4 379 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 KCNA5P22460 613 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 PRKAR2BP31323 418 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 RGS2P41220 211 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 GCLCP48506 637 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-206ENST00000471968 FKBP1AP62942 108 aaKnown RBP8.67□□□□□ -1.02
HDAC3-206ENST00000471968 PPIGQ13427 754 aaKnown RBP eCLIP8.67□□□□□ -1.023e-6■□□□□ 10.4
HDAC3-206ENST00000471968 PKN1Q16512 942 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 EPHA10Q5JZY3 1008 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 NOL9Q5SY16 702 aaKnown RBP8.67□□□□□ -1.02
HDAC3-206ENST00000471968 TREML2Q5T2D2 321 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 PTCRAQ6ISU1 281 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-206ENST00000471968 CDC5LQ99459 802 aaKnown RBP8.67□□□□□ -1.02
HDAC3-206ENST00000471968 FSD1Q9BTV5 496 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 UBE2ZQ9H832 354 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-206ENST00000471968 ZNF112Q9UJU3 913 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 AGTPBP1Q9UPW5 1226 aa8.67□□□□□ -1.02
HDAC3-206ENST00000471968 ASH1LQ9NR48 2969 aaKnown RBP8.67□□□□□ -1.02
HDAC3-206ENST00000471968 TECTAO75443 2155 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 ZNF521Q96K83 1311 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 APBB1O00213 710 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 TIMP1P01033 207 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 SLC5A1P13866 664 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 CRKP46108 304 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 KCNJ4P48050 445 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 LEXMQ3ZCV2 418 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 MFSD14CQ5VZR4 134 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 ANO1Q5XXA6 986 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 PSRC1Q6PGN9 363 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-206ENST00000471968 BMP8AQ7Z5Y6 402 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 APBA2Q99767 749 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 PANK3Q9H999 370 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 SH2B1Q9NRF2 756 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-206ENST00000471968 MUTYHQ9UIF7 546 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 AFG3L2Q9Y4W6 797 aa8.66□□□□□ -1.02
HDAC3-206ENST00000471968 SPTBN2O15020 2390 aa8.65□□□□□ -1.02
HDAC3-206ENST00000471968 TRIM75PA6NK02 468 aa8.65□□□□□ -1.02
HDAC3-206ENST00000471968 HSP90B1P14625 803 aaKnown RBP8.65□□□□□ -1.02
HDAC3-206ENST00000471968 CSF2RAP15509 400 aa8.65□□□□□ -1.02
HDAC3-206ENST00000471968 MFSD5Q6N075 450 aa8.65□□□□□ -1.02
HDAC3-206ENST00000471968 PNISRQ8TF01 805 aaKnown RBP8.65□□□□□ -1.02
HDAC3-206ENST00000471968 USP6NLQ92738 828 aa8.65□□□□□ -1.02
HDAC3-206ENST00000471968 ZFYVE26Q68DK2 2539 aa8.65□□□□□ -1.02
HDAC3-206ENST00000471968 GCN1Q92616 2671 aaKnown RBP8.65□□□□□ -1.03
HDAC3-206ENST00000471968 GBF1Q92538 1859 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 UTYO14607 1347 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 ZNF536O15090 1300 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 TMEM221A6NGB7 291 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 M0R296 226 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 PDE8AO60658 829 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 PEX10O60683 326 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 VCPP55072 806 aaKnown RBP8.64□□□□□ -1.03
HDAC3-206ENST00000471968 EIF4G2P78344 907 aaKnown RBP eCLIP8.64□□□□□ -1.03
HDAC3-206ENST00000471968 ZP2Q05996 745 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 FAAP100Q0VG06 881 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 FAM83AQ86UY5 434 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms