RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PPP1R2P41236 205 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 SETQ01105 290 aaPredicted RBP15.6■□□□□ 0.09
BRAT1-203ENST00000467558 FERMT2Q96AC1 680 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 TMEM63CQ9P1W3 806 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 NRKQ7Z2Y5 1582 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 ZMYM6O95789 1325 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 MED23Q9ULK4 1368 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 FRMPD1Q5SYB0 1578 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 VWDEQ8N2E2 1590 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 DIP2BQ9P265 1576 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 CD2BP2O95400 341 aaKnown RBP15.6■□□□□ 0.09
BRAT1-203ENST00000467558 NONOQ15233 471 aaKnown RBP eCLIP15.6■□□□□ 0.09
BRAT1-203ENST00000467558 ERFEQ4G0M1 354 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 NEURL4Q96JN8 1562 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 BAG6P46379 1132 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 PREX1Q8TCU6 1659 aa15.6■□□□□ 0.09
BRAT1-203ENST00000467558 TUBB4AP04350 444 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 LIG1P18858 919 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 ADALQ6DHV7 355 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 USP40Q9NVE5 1235 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 MCM3P25205 808 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 ARID4AP29374 1257 aaPredicted RBP15.59■□□□□ 0.09
BRAT1-203ENST00000467558 NF2P35240 595 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 SSR1P43307 286 aaKnown RBP15.59■□□□□ 0.09
BRAT1-203ENST00000467558 SUSD4Q5VX71 490 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 SV2BQ7L1I2 683 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 USP37Q86T82 979 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.59■□□□□ 0.09
BRAT1-203ENST00000467558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.59■□□□□ 0.091e-6■■■■■ 256.2
BRAT1-203ENST00000467558 VPS54Q9P1Q0 977 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 CCDC172P0C7W6 258 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 SKIDA1Q1XH10 827 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 MAP9Q49MG5 647 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 CCDC174Q6PII3 467 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 PLIN2Q99541 437 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 HLFQ16534 295 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 TMC4Q7Z404 712 aa15.59■□□□□ 0.09
BRAT1-203ENST00000467558 B4DLN1 442 aa15.58■□□□□ 0.09
BRAT1-203ENST00000467558 KCNQ4P56696 695 aa15.58■□□□□ 0.09
BRAT1-203ENST00000467558 CHMP4BP1P59074 171 aa15.58■□□□□ 0.09
BRAT1-203ENST00000467558 FAM182BQ5T319 152 aa15.58■□□□□ 0.09
BRAT1-203ENST00000467558 OSBP2Q969R2 916 aa15.58■□□□□ 0.09
BRAT1-203ENST00000467558 CWC15Q9P013 229 aaKnown RBP15.58■□□□□ 0.09
BRAT1-203ENST00000467558 BBOX1O75936 387 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 USP8P40818 1118 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 NECTIN1Q15223 517 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 MLKLQ8NB16 471 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 FBXO18Q8NFZ0 1043 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 DNAI2Q9GZS0 605 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.58■□□□□ 0.08
BRAT1-203ENST00000467558 PTGS1P23219 599 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 SCRN1Q12765 414 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 PI16Q6UXB8 463 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 USP28Q96RU2 1077 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 CRACR2AQ9BSW2 395 aa15.58■□□□□ 0.08
BRAT1-203ENST00000467558 SPATA31D1Q6ZQQ2 1576 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 PPIP5K2O43314 1243 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 SERPINB2P05120 415 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 TCP10Q12799 353 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 HS2ST1Q7LGA3 356 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.57■□□□□ 0.08
BRAT1-203ENST00000467558 NOSTRINQ8IVI9 506 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 hCG_1642624A0A1W2PR95 340 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 RRP9O43818 475 aaKnown RBP15.57■□□□□ 0.08
BRAT1-203ENST00000467558 LEKR1Q6ZMV7 388 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 PNMA1Q8ND90 353 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 CNKSR1Q969H4 720 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 CCNT1O60563 726 aaKnown RBP15.57■□□□□ 0.08
BRAT1-203ENST00000467558 KRT13P13646 458 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 ADCY7P51828 1080 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 MMRN2Q9H8L6 949 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 TRIM37O94972 964 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 TRIM28Q13263 835 aaKnown RBP15.57■□□□□ 0.08
BRAT1-203ENST00000467558 DLGAP5Q15398 846 aa15.57■□□□□ 0.08
BRAT1-203ENST00000467558 M0R2C6 588 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 RPS6KA4O75676 772 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 CCDC102AQ96A19 550 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 TMX1Q9H3N1 280 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 FAM13AO94988 1023 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 CCDC175P0C221 793 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 NOP2P46087 812 aaKnown RBP15.56■□□□□ 0.08
BRAT1-203ENST00000467558 KRT27Q7Z3Y8 459 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 CCDC65Q8IXS2 484 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 BICD1Q96G01 975 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 CBX8Q9HC52 389 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 CGNQ9P2M7 1197 aaKnown RBP15.56■□□□□ 0.08
BRAT1-203ENST00000467558 SPECC1Q5M775 1068 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 REXO1Q8N1G1 1221 aaKnown RBP15.56■□□□□ 0.08
BRAT1-203ENST00000467558 DEPDC5O75140 1603 aa15.56■□□□□ 0.08
BRAT1-203ENST00000467558 CYP19A1P11511 503 aaPredicted RBP15.55■□□□□ 0.08
BRAT1-203ENST00000467558 TXKP42681 527 aa15.55■□□□□ 0.08
BRAT1-203ENST00000467558 BTDP43251 543 aa15.55■□□□□ 0.08
BRAT1-203ENST00000467558 DNA2P51530 1060 aa15.55■□□□□ 0.08
BRAT1-203ENST00000467558 UBXN1Q04323 297 aa15.55■□□□□ 0.08
BRAT1-203ENST00000467558 APOA5Q6Q788 366 aa15.55■□□□□ 0.08
BRAT1-203ENST00000467558 C2CD5Q86YS7 1000 aa15.55■□□□□ 0.08
BRAT1-203ENST00000467558 ISCA1Q9BUE6 129 aa15.55■□□□□ 0.08
BRAT1-203ENST00000467558 PUS7LQ9H0K6 701 aaKnown RBP15.55■□□□□ 0.08
BRAT1-203ENST00000467558 DNAI1Q9UI46 699 aa15.55■□□□□ 0.08
BRAT1-203ENST00000467558 GJA3Q9Y6H8 435 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms