RNA–Protein interactions for RNA: ENST00000465559.5

FDPS-205, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-205ENST00000465559 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
FDPS-205ENST00000465559 HERC5Q9UII4 1024 aaKnown RBP18.69■□□□□ 0.58
FDPS-205ENST00000465559 GPAA1O43292 621 aa18.68■□□□□ 0.58
FDPS-205ENST00000465559 GJA5P36382 358 aa18.68■□□□□ 0.58
FDPS-205ENST00000465559 PAXIP1Q6ZW49 1069 aaPredicted RBP18.68■□□□□ 0.58
FDPS-205ENST00000465559 ZKSCAN4Q969J2 545 aaPredicted RBP18.68■□□□□ 0.58
FDPS-205ENST00000465559 SLC10A4Q96EP9 437 aa18.68■□□□□ 0.58
FDPS-205ENST00000465559 EHD4Q9H223 541 aa18.68■□□□□ 0.58
FDPS-205ENST00000465559 SAP30BPQ9UHR5 308 aaKnown RBP18.68■□□□□ 0.58
FDPS-205ENST00000465559 PTPRFP10586 1907 aa18.67■□□□□ 0.58
FDPS-205ENST00000465559 SPDYE5A6NIY4 337 aa18.67■□□□□ 0.58
FDPS-205ENST00000465559 GSG1L2A8MUP6 293 aa18.67■□□□□ 0.58
FDPS-205ENST00000465559 ZBTB48P10074 688 aaPredicted RBP18.67■□□□□ 0.58
FDPS-205ENST00000465559 PLCD1P51178 756 aa18.67■□□□□ 0.58
FDPS-205ENST00000465559 GABPAQ06546 454 aa18.67■□□□□ 0.58
FDPS-205ENST00000465559 RRP1BQ14684 758 aaKnown RBP18.67■□□□□ 0.58
FDPS-205ENST00000465559 WNK4Q96J92 1243 aa18.67■□□□□ 0.58
FDPS-205ENST00000465559 HELLSQ9NRZ9 838 aa18.67■□□□□ 0.58
FDPS-205ENST00000465559 PPP4R2Q9NY27 417 aa18.67■□□□□ 0.58
FDPS-205ENST00000465559 FAM196BA6NMK8 535 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 TRIM6-TRIM34B2RNG4 842 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 FOXP2O15409 715 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 SDSP20132 328 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 GIMAP6Q6P9H5 292 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 TTC6Q86TZ1 520 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 RILPL2Q969X0 211 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 ELP3Q9H9T3 547 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.66■□□□□ 0.58
FDPS-205ENST00000465559 CSADQ9Y600 493 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 SLC4A4Q9Y6R1 1079 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 MYH8P13535 1937 aa18.66■□□□□ 0.58
FDPS-205ENST00000465559 A0A0D9SFI3 127 aa18.65■□□□□ 0.58
FDPS-205ENST00000465559 CTNND1O60716 968 aaKnown RBP18.65■□□□□ 0.58
FDPS-205ENST00000465559 HLA-DOAP06340 250 aa18.65■□□□□ 0.58
FDPS-205ENST00000465559 GNAT2P19087 354 aa18.65■□□□□ 0.58
FDPS-205ENST00000465559 KIF23Q02241 960 aaPredicted RBP18.65■□□□□ 0.58
FDPS-205ENST00000465559 EVX2Q03828 476 aa18.65■□□□□ 0.58
FDPS-205ENST00000465559 CNKSR2Q8WXI2 1034 aa18.65■□□□□ 0.58
FDPS-205ENST00000465559 FAM227BQ96M60 508 aa18.65■□□□□ 0.58
FDPS-205ENST00000465559 EPB41L4AQ9HCS5 686 aaPredicted RBP18.65■□□□□ 0.58
FDPS-205ENST00000465559 WBP1LQ9NX94 342 aa18.65■□□□□ 0.58
FDPS-205ENST00000465559 MCM9Q9NXL9 1143 aa18.65■□□□□ 0.58
FDPS-205ENST00000465559 TAOK2Q9UL54 1235 aa18.65■□□□□ 0.58
FDPS-205ENST00000465559 PATL2C9JE40 543 aaKnown RBP18.64■□□□□ 0.57
FDPS-205ENST00000465559 GRM1Q13255 1194 aa18.64■□□□□ 0.57
FDPS-205ENST00000465559 SBK1Q52WX2 424 aa18.64■□□□□ 0.57
FDPS-205ENST00000465559 TATDN1Q6P1N9 297 aa18.64■□□□□ 0.57
FDPS-205ENST00000465559 SKAP1Q86WV1 359 aa18.64■□□□□ 0.57
FDPS-205ENST00000465559 ERO1BQ86YB8 467 aa18.64■□□□□ 0.57
FDPS-205ENST00000465559 SCYL3Q8IZE3 742 aa18.64■□□□□ 0.57
FDPS-205ENST00000465559 OPTNQ96CV9 577 aa18.64■□□□□ 0.57
FDPS-205ENST00000465559 SERPINB13Q9UIV8 391 aa18.64■□□□□ 0.57
FDPS-205ENST00000465559 CYP2D6P10635 497 aa18.63■□□□□ 0.57
FDPS-205ENST00000465559 CAP2P40123 477 aa18.63■□□□□ 0.57
FDPS-205ENST00000465559 TM4SF4P48230 202 aa18.63■□□□□ 0.57
FDPS-205ENST00000465559 NMIQ13287 307 aaPredicted RBP18.63■□□□□ 0.57
FDPS-205ENST00000465559 MCMDC2Q4G0Z9 681 aa18.63■□□□□ 0.57
FDPS-205ENST00000465559 C12orf60Q5U649 245 aa18.63■□□□□ 0.57
FDPS-205ENST00000465559 CTR9Q6PD62 1173 aa18.63■□□□□ 0.57
FDPS-205ENST00000465559 CCDC129Q6ZRS4 1044 aa18.63■□□□□ 0.57
FDPS-205ENST00000465559 REM2Q8IYK8 340 aaPredicted RBP18.63■□□□□ 0.57
FDPS-205ENST00000465559 MS4A4AQ96JQ5 239 aa18.63■□□□□ 0.57
FDPS-205ENST00000465559 TESPA1A2RU30 521 aaPredicted RBP18.62■□□□□ 0.57
FDPS-205ENST00000465559 USP17L12C9JPN9 530 aa18.62■□□□□ 0.57
FDPS-205ENST00000465559 USP17L21D6R901 530 aa18.62■□□□□ 0.57
FDPS-205ENST00000465559 SMIM22K7EJ46 135 aa18.62■□□□□ 0.57
FDPS-205ENST00000465559 POLR3DP05423 398 aaPredicted RBP18.62■□□□□ 0.57
FDPS-205ENST00000465559 JAG1P78504 1218 aa18.62■□□□□ 0.57
FDPS-205ENST00000465559 MAP2K1Q02750 393 aaPredicted RBP18.62■□□□□ 0.57
FDPS-205ENST00000465559 PPATQ06203 517 aa18.62■□□□□ 0.57
FDPS-205ENST00000465559 HIP1O00291 1037 aa18.61■□□□□ 0.57
FDPS-205ENST00000465559 PTPRAP18433 802 aa18.61■□□□□ 0.57
FDPS-205ENST00000465559 SHMT1P34896 483 aa18.61■□□□□ 0.57
FDPS-205ENST00000465559 PPIL2Q13356 520 aa18.61■□□□□ 0.57
FDPS-205ENST00000465559 SLC4A8Q2Y0W8 1093 aa18.61■□□□□ 0.57
FDPS-205ENST00000465559 ZNF589Q86UQ0 364 aaPredicted RBP18.61■□□□□ 0.57
FDPS-205ENST00000465559 IFNL3Q8IZI9 196 aa18.61■□□□□ 0.57
FDPS-205ENST00000465559 GINM1Q9NU53 330 aa18.61■□□□□ 0.57
FDPS-205ENST00000465559 KCNH4Q9UQ05 1017 aa18.61■□□□□ 0.57
FDPS-205ENST00000465559 ROBO3Q96MS0 1386 aa18.6■□□□□ 0.57
FDPS-205ENST00000465559 CYP2D7A0A087X1C5 515 aa18.6■□□□□ 0.57
FDPS-205ENST00000465559 MANSC4A6NHS7 340 aaPredicted RBP18.6■□□□□ 0.57
FDPS-205ENST00000465559 IRF6O14896 467 aa18.6■□□□□ 0.57
FDPS-205ENST00000465559 ALX1Q15699 326 aa18.6■□□□□ 0.57
FDPS-205ENST00000465559 CRACR2BQ8N4Y2 399 aaPredicted RBP18.6■□□□□ 0.57
FDPS-205ENST00000465559 OTUD5Q96G74 571 aa18.6■□□□□ 0.57
FDPS-205ENST00000465559 ARPP21Q9UBL0 812 aaPredicted RBP18.6■□□□□ 0.57
FDPS-205ENST00000465559 GREB1LQ9C091 1923 aaPredicted RBP18.59■□□□□ 0.57
FDPS-205ENST00000465559 INHBEP58166 350 aa18.59■□□□□ 0.57
FDPS-205ENST00000465559 MKRN3Q13064 507 aaKnown RBP18.59■□□□□ 0.57
FDPS-205ENST00000465559 VPS53Q5VIR6 699 aa18.59■□□□□ 0.57
FDPS-205ENST00000465559 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
FDPS-205ENST00000465559 AFG3L2Q9Y4W6 797 aa18.59■□□□□ 0.57
FDPS-205ENST00000465559 CCDC171Q6TFL3 1326 aa18.58■□□□□ 0.57
FDPS-205ENST00000465559 HSPA1AP0DMV8 641 aaKnown RBP18.58■□□□□ 0.56
FDPS-205ENST00000465559 HSPA1BP0DMV9 641 aaKnown RBP18.58■□□□□ 0.56
FDPS-205ENST00000465559 CHMLP26374 656 aa18.58■□□□□ 0.56
FDPS-205ENST00000465559 SHROOM1Q2M3G4 852 aaPredicted RBP18.58■□□□□ 0.56
FDPS-205ENST00000465559 BMP2KLQ5H9B9 411 aa18.58■□□□□ 0.56
FDPS-205ENST00000465559 C16orf86Q6ZW13 317 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms