RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 EPB41L4AQ9HCS5 686 aaPredicted RBP22.72■■□□□ 1.23
LMNB1-204ENST00000463908 USP17L12C9JPN9 530 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 USP17L21D6R901 530 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 HIP1O00291 1037 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 POLR3DP05423 398 aaPredicted RBP22.71■■□□□ 1.23
LMNB1-204ENST00000463908 GNAT2P19087 354 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 RRP1BQ14684 758 aaKnown RBP22.71■■□□□ 1.23
LMNB1-204ENST00000463908 VPS53Q5VIR6 699 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 CYP4F22Q6NT55 531 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 CTR9Q6PD62 1173 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 ZKSCAN4Q969J2 545 aaPredicted RBP22.71■■□□□ 1.23
LMNB1-204ENST00000463908 IL25Q9H293 177 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 DNAJC18Q9H819 358 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 DIAPH3Q9NSV4 1193 aa22.71■■□□□ 1.23
LMNB1-204ENST00000463908 CYP2D7A0A087X1C5 515 aa22.7■■□□□ 1.22
LMNB1-204ENST00000463908 UNCXA6NJT0 531 aa22.7■■□□□ 1.22
LMNB1-204ENST00000463908 INPP5BP32019 993 aa22.7■■□□□ 1.22
LMNB1-204ENST00000463908 VEGFBP49765 207 aa22.7■■□□□ 1.22
LMNB1-204ENST00000463908 GIMAP6Q6P9H5 292 aa22.7■■□□□ 1.22
LMNB1-204ENST00000463908 TTC6Q86TZ1 520 aa22.7■■□□□ 1.22
LMNB1-204ENST00000463908 ANKRD13AQ8IZ07 590 aa22.7■■□□□ 1.22
LMNB1-204ENST00000463908 IFNL3Q8IZI9 196 aa22.7■■□□□ 1.22
LMNB1-204ENST00000463908 WRNIP1Q96S55 665 aa22.7■■□□□ 1.22
LMNB1-204ENST00000463908 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.7■■□□□ 1.22
LMNB1-204ENST00000463908 AK9Q5TCS8 1911 aa22.69■■□□□ 1.22
LMNB1-204ENST00000463908 FAM155AB1AL88 458 aaPredicted RBP22.69■■□□□ 1.22
LMNB1-204ENST00000463908 APPP05067 770 aa22.69■■□□□ 1.22
LMNB1-204ENST00000463908 HLA-DOAP06340 250 aa22.69■■□□□ 1.22
LMNB1-204ENST00000463908 ZNF157P51786 506 aaPredicted RBP22.69■■□□□ 1.22
LMNB1-204ENST00000463908 VGLL4Q14135 290 aa22.69■■□□□ 1.22
LMNB1-204ENST00000463908 C12orf60Q5U649 245 aa22.69■■□□□ 1.22
LMNB1-204ENST00000463908 HERC5Q9UII4 1024 aaKnown RBP22.69■■□□□ 1.22
LMNB1-204ENST00000463908 SIPA1L1O43166 1804 aa22.68■■□□□ 1.22
LMNB1-204ENST00000463908 GABPAQ06546 454 aa22.68■■□□□ 1.22
LMNB1-204ENST00000463908 SLC10A4Q96EP9 437 aa22.68■■□□□ 1.22
LMNB1-204ENST00000463908 CAPNS2Q96L46 248 aa22.68■■□□□ 1.22
LMNB1-204ENST00000463908 EHD4Q9H223 541 aa22.68■■□□□ 1.22
LMNB1-204ENST00000463908 CCDC171Q6TFL3 1326 aa22.67■■□□□ 1.22
LMNB1-204ENST00000463908 WDR33Q9C0J8 1336 aaKnown RBP22.67■■□□□ 1.22
LMNB1-204ENST00000463908 SBK1Q52WX2 424 aa22.67■■□□□ 1.22
LMNB1-204ENST00000463908 PAXIP1Q6ZW49 1069 aaPredicted RBP22.67■■□□□ 1.22
LMNB1-204ENST00000463908 RASAL3Q86YV0 1011 aa22.67■■□□□ 1.22
LMNB1-204ENST00000463908 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.67■■□□□ 1.22
LMNB1-204ENST00000463908 SERPINB13Q9UIV8 391 aa22.67■■□□□ 1.22
LMNB1-204ENST00000463908 SNCAIPQ9Y6H5 919 aa22.67■■□□□ 1.22
LMNB1-204ENST00000463908 DDX60LQ5H9U9 1706 aaKnown RBP22.67■■□□□ 1.22
LMNB1-204ENST00000463908 MYH1P12882 1939 aa22.67■■□□□ 1.22
LMNB1-204ENST00000463908 HSPD1P10809 573 aaKnown RBP22.66■■□□□ 1.22
LMNB1-204ENST00000463908 JAG1P78504 1218 aa22.66■■□□□ 1.22
LMNB1-204ENST00000463908 CRACR2BQ8N4Y2 399 aaPredicted RBP22.66■■□□□ 1.22
LMNB1-204ENST00000463908 CNKSR2Q8WXI2 1034 aa22.66■■□□□ 1.22
LMNB1-204ENST00000463908 CCDC102AQ96A19 550 aa22.66■■□□□ 1.22
LMNB1-204ENST00000463908 DYNLL2Q96FJ2 89 aa22.66■■□□□ 1.22
LMNB1-204ENST00000463908 DDRGK1Q96HY6 314 aa22.66■■□□□ 1.22
LMNB1-204ENST00000463908 ZIC5Q96T25 663 aa22.66■■□□□ 1.22
LMNB1-204ENST00000463908 ELP3Q9H9T3 547 aa22.66■■□□□ 1.22
LMNB1-204ENST00000463908 SLC10A3P09131 477 aa22.65■■□□□ 1.22
LMNB1-204ENST00000463908 GJA5P36382 358 aa22.65■■□□□ 1.22
LMNB1-204ENST00000463908 GRM1Q13255 1194 aa22.65■■□□□ 1.22
LMNB1-204ENST00000463908 ALX1Q15699 326 aa22.65■■□□□ 1.22
LMNB1-204ENST00000463908 TATDN1Q6P1N9 297 aa22.65■■□□□ 1.22
LMNB1-204ENST00000463908 CTNND1O60716 968 aaKnown RBP22.64■■□□□ 1.21
LMNB1-204ENST00000463908 AOC2O75106 756 aa22.64■■□□□ 1.21
LMNB1-204ENST00000463908 SHMT1P34896 483 aa22.64■■□□□ 1.21
LMNB1-204ENST00000463908 ECE1P42892 770 aa22.64■■□□□ 1.21
LMNB1-204ENST00000463908 TDO2P48775 406 aa22.64■■□□□ 1.21
LMNB1-204ENST00000463908 NOL9Q5SY16 702 aaKnown RBP22.64■■□□□ 1.21
LMNB1-204ENST00000463908 NACAP1Q9BZK3 213 aa22.64■■□□□ 1.21
LMNB1-204ENST00000463908 ARPP21Q9UBL0 812 aaPredicted RBP22.64■■□□□ 1.21
LMNB1-204ENST00000463908 CSADQ9Y600 493 aa22.64■■□□□ 1.21
LMNB1-204ENST00000463908 NAV1Q8NEY1 1877 aa22.64■■□□□ 1.21
LMNB1-204ENST00000463908 MINDY4BA8MYZ0 360 aa22.63■■□□□ 1.21
LMNB1-204ENST00000463908 FGAP02671 866 aa22.63■■□□□ 1.21
LMNB1-204ENST00000463908 CAP2P40123 477 aa22.63■■□□□ 1.21
LMNB1-204ENST00000463908 SHROOM1Q2M3G4 852 aaPredicted RBP22.63■■□□□ 1.21
LMNB1-204ENST00000463908 SPRYD7Q5W111 196 aa22.63■■□□□ 1.21
LMNB1-204ENST00000463908 SCYL3Q8IZE3 742 aa22.63■■□□□ 1.21
LMNB1-204ENST00000463908 SLC44A5Q8NCS7 719 aa22.63■■□□□ 1.21
LMNB1-204ENST00000463908 WNK4Q96J92 1243 aa22.63■■□□□ 1.21
LMNB1-204ENST00000463908 BAZ2AQ9UIF9 1905 aaKnown RBP22.63■■□□□ 1.21
LMNB1-204ENST00000463908 SGSM2O43147 1006 aa22.62■■□□□ 1.21
LMNB1-204ENST00000463908 MFAP1P55081 439 aaKnown RBP22.62■■□□□ 1.21
LMNB1-204ENST00000463908 TRIM34Q9BYJ4 488 aa22.62■■□□□ 1.21
LMNB1-204ENST00000463908 NAPBQ9H115 298 aa22.62■■□□□ 1.21
LMNB1-204ENST00000463908 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.62■■□□□ 1.21
LMNB1-204ENST00000463908 OTOFQ9HC10 1997 aa22.61■■□□□ 1.21
LMNB1-204ENST00000463908 SPDYE5A6NIY4 337 aa22.61■■□□□ 1.21
LMNB1-204ENST00000463908 FOXN1O15353 648 aa22.61■■□□□ 1.21
LMNB1-204ENST00000463908 CDK8P49336 464 aa22.61■■□□□ 1.21
LMNB1-204ENST00000463908 MKRN3Q13064 507 aaKnown RBP22.61■■□□□ 1.21
LMNB1-204ENST00000463908 C16orf86Q6ZW13 317 aa22.61■■□□□ 1.21
LMNB1-204ENST00000463908 ERO1BQ86YB8 467 aa22.61■■□□□ 1.21
LMNB1-204ENST00000463908 RUFY2Q8WXA3 655 aa22.61■■□□□ 1.21
LMNB1-204ENST00000463908 OPTNQ96CV9 577 aa22.61■■□□□ 1.21
LMNB1-204ENST00000463908 GTF3C3Q9Y5Q9 886 aa22.61■■□□□ 1.21
LMNB1-204ENST00000463908 PTPRAP18433 802 aa22.6■■□□□ 1.21
LMNB1-204ENST00000463908 KIF23Q02241 960 aaPredicted RBP22.6■■□□□ 1.21
LMNB1-204ENST00000463908 AMOTL1Q8IY63 956 aa22.6■■□□□ 1.21
LMNB1-204ENST00000463908 RAD50Q92878 1312 aa22.59■■□□□ 1.21
LMNB1-204ENST00000463908 GDF11O95390 407 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms