RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 LEKR1Q6ZMV7 388 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 TXNRD3Q86VQ6 643 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 NEUROD6Q96NK8 337 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 LRRCC1Q9C099 1032 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 FPGT-TNNI3KV9GXZ4 949 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 PHLPP2Q6ZVD8 1323 aa13.24□□□□□ -0.29
TRAPPC3-205ENST00000462715 EFCAB8A8MWE9 144 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 TRIM66O15016 1216 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 DPY19L2Q6NUT2 758 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 CLASRPQ8N2M8 674 aaKnown RBP13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 SKILP12757 684 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 GYG1P46976 350 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 TIMM10P62072 90 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 GORABQ5T7V8 394 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 ARAP2Q8WZ64 1704 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 UBXN4Q92575 508 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 FAM84BQ96KN1 310 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 GNL3LQ9NVN8 582 aaKnown RBP13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
TRAPPC3-205ENST00000462715 TNIP1Q15025 636 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 ERCC6LQ2NKX8 1250 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 ARHGAP29Q52LW3 1261 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 FBXO33Q7Z6M2 555 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 REXO1L1PQ8IX06 675 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 CXorf56Q9H5V9 222 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 CD209Q9NNX6 404 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 SYT1P21579 422 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 OAS2P29728 719 aaKnown RBP13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 CCZ1BP86790 482 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 SMC1AQ14683 1233 aaKnown RBP13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 MMS22LQ6ZRQ5 1243 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 XAGE2Q96GT9 111 aa13.22□□□□□ -0.29
TRAPPC3-205ENST00000462715 NRDCO43847 1150 aa13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 IL1R1P14778 569 aa13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 CORO7P57737 925 aa13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 CT47A1Q5JQC4 288 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 CIAPIN1Q6FI81 312 aa13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 AACSQ86V21 672 aa13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 LUZP1Q86V48 1076 aa13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 OSBPL5Q9H0X9 879 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 IL1RAPL2Q9NP60 686 aa13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 LCMT1Q9UIC8 334 aa13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC3-205ENST00000462715 YDJCA8MPS7 323 aa13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 RAD17O75943 681 aa13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 ADORA1P30542 326 aa13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 BCAMP50895 628 aa13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 ANO6Q4KMQ2 910 aa13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 EFCAB13Q8IY85 973 aa13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 GPC2Q8N158 579 aa13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 TNMDQ9H2S6 317 aa13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 CLSTN2Q9H4D0 955 aa13.21□□□□□ -0.3
TRAPPC3-205ENST00000462715 TTC41PQ6P2S7 1318 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 USP17L3A6NCW0 530 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 USP17L4A6NCW7 530 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 CALRP27797 417 aaKnown RBP13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 USP8P40818 1118 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 CXCL9Q07325 125 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 ZRSR1Q15695 479 aaKnown RBP13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 USP17L1Q7RTZ2 530 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 GPR161Q8N6U8 529 aaKnown RBP13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 EAF2Q96CJ1 260 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 ZSCAN31Q96LW9 406 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 RBM28Q9NW13 759 aaKnown RBP13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 AOX1Q06278 1338 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 FIBPO43427 364 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 YY1P25490 414 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 NBPF20Q3BBV1 942 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 CCDC144BQ3MJ40 725 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 TSGA10IPQ3SY00 556 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 CCDC102BQ68D86 513 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 PACS2Q86VP3 889 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 FBXW7Q969H0 707 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 ZBTB9Q96C00 473 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
TRAPPC3-205ENST00000462715 SEMA3EO15041 775 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 POLR3GO15318 223 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 TBC1D8O95759 1140 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 HSPA4P34932 840 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 ZNF165P49910 485 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 KRT85P78386 507 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 CCDC150Q8NCX0 1101 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 ADAM21Q9UKJ8 722 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 PDE1AP54750 535 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 GYS2P54840 703 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 TUBB4BP68371 445 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms